Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0006_(gyrA)_7302_9818
DateTue Jul 23 14:50:03 BST 2019
Unique Job ID47686c88ac10f2c6
SequenceMTDTTLPPDD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:104.639 Y:109.520 Z:110.582
Model (left) based on template c1zvuA_
Top template information
PDB header:isomerase
Chain: A: PDB Molecule:topoisomerase iv subunit a;
PDBTitle: structure of the full-length e. coli parc subunit
Confidence and coverage
Confidence:100.0% Coverage: 79%
665 residues ( 79% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
720 residues ( 86%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1zvuA_
100.0 35
PDB header:isomerase
Chain: A: PDB Molecule:topoisomerase iv subunit a;
PDBTitle: structure of the full-length e. coli parc subunit
2c3rafA_
100.0 42
PDB header:isomerase/dna/antibiotic
Chain: A: PDB Molecule:dna topoisomerase 4 subunit a;
PDBTitle: quinazolinedione-dna cleavage complex of type iv topoisomerase from s.2 pneumoniae
3c4i3hA_
100.0 42
PDB header:isomerase/dna
Chain: A: PDB Molecule:topoisomerase iv subunit b, dna topoisomerase 4 subunit a
PDBTitle: a three-gate structure of topoisomerase iv from streptococcus2 pneumoniae
4c6gauB_
100.0 99
PDB header:dna binding protein
Chain: B: PDB Molecule:dna gyrase subunit b,dna gyrase subunit a;
PDBTitle: extremely 'open' clamp structure of dna gyrase: role of the2 corynebacteriales gyrb specific insert
5c4z2cA_
100.0 54
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: quinolone(moxifloxacin)-dna cleavage complex of gyrase from s.2 pneumoniae
6c2xcsD_
100.0 56
PDB header:isomerase
Chain: D: PDB Molecule:dna gyrase subunit b, dna gyrase subunit a;
PDBTitle: the 2.1a crystal structure of s. aureus gyrase complex with gsk2994232 and dna
7c3ifzA_
100.0 99
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: crystal structure of the first part of the mycobacterium tuberculosis2 dna gyrase reaction core: the breakage and reunion domain at 2.7 a3 resolution
8c2wl2B_
100.0 52
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase subunit a;
PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8
9c3ilwA_
100.0 100
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: structure of dna gyrase subunit a n-terminal domain
10c2xcqA_
100.0 57
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit b, dna gyrase subunit a;
PDBTitle: the 2.98a crystal structure of the catalytic core (b'a'2 region) of staphylococcus aureus dna gyrase
11c2xkjE_
100.0 41
PDB header:isomerase
Chain: E: PDB Molecule:topoisomerase iv;
PDBTitle: crystal structure of catalytic core of a. baumannii topo iv (pare-2 parc fusion truncate)
12d1ab4a_
100.0 51
Fold:Type II DNA topoisomerase
Superfamily:Type II DNA topoisomerase
Family:Type II DNA topoisomerase
13c5eixB_
100.0 42
PDB header:isomerase/dna
Chain: B: PDB Molecule:dna topoisomerase 4 subunit b,dna topoisomerase 4 subunit
PDBTitle: quinolone-stabilized cleavage complex of topoisomerase iv from2 klebsiella pneumoniae
14c5eixG_
100.0 42
PDB header:isomerase/dna
Chain: G: PDB Molecule:dna topoisomerase 4 subunit b,dna topoisomerase 4 subunit
PDBTitle: quinolone-stabilized cleavage complex of topoisomerase iv from2 klebsiella pneumoniae
15c2inrA_
100.0 48
PDB header:isomerase
Chain: A: PDB Molecule:dna topoisomerase 4 subunit a;
PDBTitle: crystal structure of a 59 kda fragment of topoisomerase iv subunit a2 (grla) from staphylococcus aureus
16c2novD_
100.0 44
PDB header:isomerase
Chain: D: PDB Molecule:dna topoisomerase 4 subunit a;
PDBTitle: breakage-reunion domain of s.pneumoniae topo iv: crystal structure of2 a gram-positive quinolone target
17c6ca8A_
100.0 21
PDB header:isomerase
Chain: A: PDB Molecule:dna topoisomerase 2;
PDBTitle: crystal structure of plasmodium falciparum topoisomerase ii dna-2 binding, cleavage and re-ligation domain
18c4fm9A_
100.0 21
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 2-alpha;
PDBTitle: human topoisomerase ii alpha bound to dna
19c3qx3B_
100.0 23
PDB header:isomerase/dna/isomerase inhibitor
Chain: B: PDB Molecule:dna topoisomerase 2-beta;
PDBTitle: human topoisomerase iibeta in complex with dna and etoposide
20c4gfhA_
100.0 22
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 2;
PDBTitle: topoisomerase ii-dna-amppnp complex
21d1bjta_
not modelled 100.0 22
Fold:Type II DNA topoisomerase
Superfamily:Type II DNA topoisomerase
Family:Type II DNA topoisomerase
22c1bjtA_
not modelled 100.0 22
PDB header:topoisomerase
Chain: A: PDB Molecule:topoisomerase ii;
PDBTitle: topoisomerase ii residues 409-1201
23c3l6vA_
not modelled 100.0 40
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: crystal structure of the xanthomonas campestris gyrase a c-2 terminal domain
24c3uc1A_
not modelled 100.0 100
PDB header:isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: mycobacterium tuberculosis gyrase type iia topoisomerase c-terminal2 domain
25d1wp5a_
not modelled 100.0 26
Fold:6-bladed beta-propeller
Superfamily:GyrA/ParC C-terminal domain-like
Family:GyrA/ParC C-terminal domain-like
26d1suua_
not modelled 100.0 28
Fold:6-bladed beta-propeller
Superfamily:GyrA/ParC C-terminal domain-like
Family:GyrA/ParC C-terminal domain-like
27c1zi0A_
not modelled 100.0 41
PDB header:isomerase, dna bindng protein
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: a superhelical spiral in escherichia coli dna gyrase a c-2 terminal domain imparts unidirectional supercoiling bias
28c3no0B_
not modelled 100.0 23
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase subunit a;
PDBTitle: aquifex aeolicus type iia topoisomerase c-terminal domain
29c1zvtA_
not modelled 100.0 19
PDB header:isomerase
Chain: A: PDB Molecule:topoisomerase iv subunit a;
PDBTitle: structure of the e. coli parc c-terminal domain
30d1x75a1
not modelled 99.9 46
Fold:Type II DNA topoisomerase
Superfamily:Type II DNA topoisomerase
Family:Type II DNA topoisomerase
31c3ku8A_
not modelled 99.9 45
PDB header:toxin/isomerase
Chain: A: PDB Molecule:dna gyrase subunit a;
PDBTitle: ccdbvfi:gyra14ec
32c6chgD_
not modelled 87.3 13
PDB header:transferase
Chain: D: PDB Molecule:klla0a08800p;
PDBTitle: crystal structure of the yeast compass catalytic module
33c1t3jA_
not modelled 85.7 17
PDB header:membrane protein
Chain: A: PDB Molecule:mitofusin 1;
PDBTitle: mitofusin domain hr2 v686m/i708m mutant
34c6nd4O_
not modelled 82.6 15
PDB header:ribosome
Chain: O: PDB Molecule:utp1;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
35c2oajA_
not modelled 82.1 11
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:protein sni1;
PDBTitle: crystal structure of sro7 from s. cerevisiae
36c6nd4H_
not modelled 78.3 15
PDB header:ribosome
Chain: H: PDB Molecule:utp17;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
37c4uuyA_
not modelled 76.6 11
PDB header:transport protein
Chain: A: PDB Molecule:vacuolar membrane protein pep3;
PDBTitle: structural identification of the vps18 beta-propeller reveals2 a critical role in the hops complex stability and function.
38c6n8sA_
not modelled 75.3 16
PDB header:lipid binding protein
Chain: A: PDB Molecule:lethal(2) giant larvae protein homolog 2;
PDBTitle: crystal structure of the human cell polarity protein lethal giant2 larvae 2 (lgl2). apkc phosphorylated, crystal form 3.
39c3dm0A_
not modelled 71.8 15
PDB header:sugar binding protein,signaling protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with rack1;
PDBTitle: maltose binding protein fusion with rack1 from a. thaliana
40c5haxA_
not modelled 69.4 14
PDB header:transport protein
Chain: A: PDB Molecule:nucleoporin nup170;
PDBTitle: crystal structure of chaetomium thermophilum nup170 ntd-nup53 complex
41c5a1vK_
not modelled 68.7 10
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
42c3jb9U_
not modelled 68.4 14
PDB header:rna binding protein/rna
Chain: U: PDB Molecule:pre-mrna-processing factor 19;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
43c2q6tB_
not modelled 67.7 24
PDB header:hydrolase
Chain: B: PDB Molecule:dnab replication fork helicase;
PDBTitle: crystal structure of the thermus aquaticus dnab monomer
44c6nd4Q_
not modelled 67.5 14
PDB header:ribosome
Chain: Q: PDB Molecule:utp12;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
45c5a1vL_
not modelled 65.2 13
PDB header:transport protein
Chain: L: PDB Molecule:coatomer subunit beta;
PDBTitle: the structure of the copi coat linkage i
46c3fokH_
not modelled 63.8 20
PDB header:structural genomics, unknown function
Chain: H: PDB Molecule:uncharacterized protein cgl0159;
PDBTitle: crystal structure of cgl0159 from corynebacterium2 glutamicum (brevibacterium flavum). northeast structural3 genomics target cgr115
47c3a7pB_
not modelled 63.2 16
PDB header:protein transport
Chain: B: PDB Molecule:autophagy protein 16;
PDBTitle: the crystal structure of saccharomyces cerevisiae atg16
48c5gvbA_
not modelled 63.1 15
PDB header:replication, peptide binding protein
Chain: A: PDB Molecule:wd repeat and hmg-box dna-binding protein 1;
PDBTitle: sepb domain of human and-1
49c5dfzB_
not modelled 49.6 12
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase vps15;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
50c2pbiB_
not modelled 48.2 10
PDB header:signaling protein
Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta 5;
PDBTitle: the multifunctional nature of gbeta5/rgs9 revealed from its crystal2 structure
51d2v8qb1
not modelled 47.5 25
Fold:AMPKBI-like
Superfamily:AMPKBI-like
Family:AMPKBI-like
52c2vyeA_
not modelled 46.9 18
PDB header:hydrolase/dna
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: crystal structure of the dnac-ssdna complex
53c6qelB_
not modelled 46.0 20
PDB header:replication
Chain: B: PDB Molecule:replicative dna helicase;
PDBTitle: e. coli dnabc apo complex
54d2g0da1
not modelled 46.0 13
Fold:alpha/alpha toroid
Superfamily:LanC-like
Family:LanC-like
55c6girA_
not modelled 45.3 17
PDB header:cytosolic protein
Chain: A: PDB Molecule:serine--trna ligase, cytoplasmic;
PDBTitle: arabidopsis thaliana cytosolic seryl-trna synthetase
56c2lmiA_
not modelled 44.3 14
PDB header:rna binding protein
Chain: A: PDB Molecule:g-rich sequence factor 1;
PDBTitle: nmr structure of the protein bc040485 from homo sapiens
57c4e8lC_
not modelled 42.2 12
PDB header:transferase
Chain: C: PDB Molecule:virginiamycin a acetyltransferase;
PDBTitle: crystal structure of streptogramin group a antibiotic2 acetyltransferase vata from staphylococcus aureus
58c4qt8A_
not modelled 40.7 14
PDB header:hydrolase/signaling protein
Chain: A: PDB Molecule:macrophage-stimulating protein receptor;
PDBTitle: crystal structure of ron sema-psi-ipt1 extracellular domains in2 complex with msp beta-chain
59c4a2lD_
not modelled 40.1 12
PDB header:transcription
Chain: D: PDB Molecule:two-component system sensor histidine kinase/response;
PDBTitle: structure of the periplasmic domain of the heparin and heparan2 sulphate sensing hybrid two component system bt4663 in apo and3 ligand bound forms
60c3jroA_
not modelled 39.9 13
PDB header:transport protein, structural protein
Chain: A: PDB Molecule:fusion protein of protein transport protein sec13 and
PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice
61d2ayua1
not modelled 39.8 14
Fold:NAP-like
Superfamily:NAP-like
Family:NAP-like
62c2ayuA_
not modelled 39.8 14
PDB header:chaperone
Chain: A: PDB Molecule:nucleosome assembly protein;
PDBTitle: the structure of nucleosome assembly protein suggests a mechanism for2 histone binding and shuttling
63d1jwea_
not modelled 39.7 20
Fold:N-terminal domain of DnaB helicase
Superfamily:N-terminal domain of DnaB helicase
Family:N-terminal domain of DnaB helicase
64c1q1hA_
not modelled 39.3 33
PDB header:transcription
Chain: A: PDB Molecule:transcription factor e;
PDBTitle: an extended winged helix domain in general transcription2 factor e/iie alpha
65d1q1ha_
not modelled 39.3 33
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcription factor E/IIe-alpha, N-terminal domain
66c3zfjA_
not modelled 39.2 36
PDB header:zinc-binding protein
Chain: A: PDB Molecule:pneumococcal histidine triad protein d;
PDBTitle: n-terminal domain of pneumococcal phtd protein with bound2 zn(ii)
67c5mg8B_
not modelled 39.1 20
PDB header:recombination
Chain: B: PDB Molecule:structural maintenance of chromosomes protein 6;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
68d3dm8a1
not modelled 39.1 26
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
69c2lq3A_
not modelled 37.6 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of syc0711_d from synechococcus sp., northeast2 structural genomics consortium (nesg) target snr212
70c6bbmA_
not modelled 37.4 20
PDB header:replication
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: mechanisms of opening and closing of the bacterial replicative2 helicase: the dnab helicase and lambda p helicase loader complex
71d1ivsa1
not modelled 37.3 27
Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Valyl-tRNA synthetase (ValRS) C-terminal domain
72c4h5jB_
not modelled 37.1 12
PDB header:protein transport
Chain: B: PDB Molecule:guanine nucleotide-exchange factor sec12;
PDBTitle: crystal structure of the guanine nucleotide exchange factor sec12 (p642 form)
73c5nzvC_
not modelled 36.8 13
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit beta';
PDBTitle: the structure of the copi coat linkage iv
74c1u0iA_
not modelled 36.4 38
PDB header:de novo protein
Chain: A: PDB Molecule:iaal-e3;
PDBTitle: iaal-e3/k3 heterodimer
75c4dznC_
not modelled 36.3 32
PDB header:de novo protein
Chain: C: PDB Molecule:coiled-coil peptide cc-pil;
PDBTitle: a de novo designed coiled coil cc-pil
76c4dznA_
not modelled 36.3 32
PDB header:de novo protein
Chain: A: PDB Molecule:coiled-coil peptide cc-pil;
PDBTitle: a de novo designed coiled coil cc-pil
77c4dznB_
not modelled 36.3 32
PDB header:de novo protein
Chain: B: PDB Molecule:coiled-coil peptide cc-pil;
PDBTitle: a de novo designed coiled coil cc-pil
78c5a9qB_
not modelled 34.2 14
PDB header:transport protein
Chain: B: PDB Molecule:nuclear pore complex protein nup155;
PDBTitle: human nuclear pore complex
79c6ch2E_
not modelled 34.1 15
PDB header:structural protein
Chain: E: PDB Molecule:flagellar hook-associated protein 2,flagellar protein flit;
PDBTitle: crystal structure of the cytoplasmic domain of flha and flit-flid2 complex
80c5a1uC_
not modelled 33.0 10
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat triad
81c5yjeA_
not modelled 32.0 16
PDB header:gene regulation
Chain: A: PDB Molecule:protein hira;
PDBTitle: crystal structure of hira(644-1017)
82c2pqaB_
not modelled 31.7 29
PDB header:replication
Chain: B: PDB Molecule:replication protein a 14 kda subunit;
PDBTitle: crystal structure of full-length human rpa 14/32 heterodimer
83d2qrdb1
not modelled 31.3 17
Fold:AMPKBI-like
Superfamily:AMPKBI-like
Family:AMPKBI-like
84c1dpuA_
not modelled 31.2 27
PDB header:dna binding protein
Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain;
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
85d1dpua_
not modelled 31.2 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal domain of RPA32
86d1k32a3
not modelled 30.0 9
Fold:7-bladed beta-propeller
Superfamily:Tricorn protease domain 2
Family:Tricorn protease domain 2
87c3ushB_
not modelled 29.9 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q2s0r5 protein from salinibacter ruber,2 northeast structural genomics consortium target srr207
88d2dloa1
not modelled 29.7 71
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
89c4q9tB_
not modelled 29.2 15
PDB header:protein transport
Chain: B: PDB Molecule:nucleoporin nup133;
PDBTitle: crystal structure of vanderwaltozyma polyspora nup133 beta-propeller2 domain
90c5tzsT_
not modelled 29.0 10
PDB header:translation
Chain: T: PDB Molecule:utp21;
PDBTitle: architecture of the yeast small subunit processome
91c3a7mA_
not modelled 28.9 15
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:flagellar protein flit;
PDBTitle: structure of flit, the flagellar type iii chaperone for flid
92c6nd4N_
not modelled 28.4 10
PDB header:ribosome
Chain: N: PDB Molecule:utp4;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
93d2pi2e1
not modelled 28.3 29
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
94c5cwtB_
not modelled 27.9 18
PDB header:transport protein
Chain: B: PDB Molecule:nucleoporin nup57;
PDBTitle: crystal structure of chaetomium thermophilum nup57
95c3qo8A_
not modelled 27.8 12
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic;
PDBTitle: crystal structure of seryl-trna synthetase from candida albicans
96c5ax7A_
not modelled 27.7 23
PDB header:transferase
Chain: A: PDB Molecule:pyruvyl transferase 1;
PDBTitle: yeast pyruvyltransferase pvg1p
97d1mlda2
not modelled 27.6 15
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
98c2p9mD_
not modelled 27.6 10
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0922;
PDBTitle: crystal structure of conserved hypothetical protein mj0922 from2 methanocaldococcus jannaschii dsm 2661
99c1yadD_
not modelled 27.2 19
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein teni;
PDBTitle: structure of teni from bacillus subtilis
100c4eacC_
not modelled 27.1 19
PDB header:lyase
Chain: C: PDB Molecule:mannonate dehydratase;
PDBTitle: crystal structure of mannonate dehydratase from escherichia coli2 strain k12
101d1b4ua_
not modelled 26.5 7
Fold:LigA subunit of an aromatic-ring-opening dioxygenase LigAB
Superfamily:LigA subunit of an aromatic-ring-opening dioxygenase LigAB
Family:LigA subunit of an aromatic-ring-opening dioxygenase LigAB
102c4w7yB_
not modelled 26.4 13
PDB header:transport protein
Chain: B: PDB Molecule:b-cell receptor-associated protein 29;
PDBTitle: dimeric bap29 vded with disulfide bonds in crystal contacts
103c2dfdD_
not modelled 26.4 21
PDB header:oxidoreductase
Chain: D: PDB Molecule:malate dehydrogenase;
PDBTitle: crystal structure of human malate dehydrogenase type 2
104d1wi9a_
not modelled 26.1 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PCI domain (PINT motif)
105c4iohA_
not modelled 25.6 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tll1086 protein;
PDBTitle: crystal structure of the tll1086 protein from thermosynechococcus2 elongatus, northeast structural genomics consortium target ter258
106d2f2ac1
not modelled 25.3 9
Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Glu-tRNAGln amidotransferase C subunit
Family:Glu-tRNAGln amidotransferase C subunit
107c5n80A_
not modelled 24.7 12
PDB header:transferase
Chain: A: PDB Molecule:lipopolysaccharide 1,6-galactosyltransferase;
PDBTitle: glycosyltransferase lps biosynthesis in complex with udp
108c3kpbA_
not modelled 24.7 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein mj0100;
PDBTitle: crystal structure of the cbs domain pair of protein mj01002 in complex with 5 -methylthioadenosine and s-adenosyl-l-3 methionine.
109d1dlca1
not modelled 24.6 27
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:delta-Endotoxin, C-terminal domain
110c3lssA_
not modelled 24.5 13
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp
111c3mkqA_
not modelled 24.2 13
PDB header:transport protein
Chain: A: PDB Molecule:coatomer beta'-subunit;
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
112c2hpcF_
not modelled 23.8 11
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen, gamma polypeptide;
PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide.
113d1a06a_
not modelled 23.6 30
Fold:Protein kinase-like (PK-like)
Superfamily:Protein kinase-like (PK-like)
Family:Protein kinases, catalytic subunit
114c3whlB_
not modelled 23.1 13
PDB header:hydrolase/chaperone
Chain: B: PDB Molecule:probable 26s proteasome regulatory subunit p27;
PDBTitle: crystal structure of nas2 n-terminal domain complexed with pan-rpt5c2 chimera
115d1n0ua3
not modelled 23.0 30
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Translational machinery components
116c4i92A_
not modelled 22.6 8
PDB header:transferase
Chain: A: PDB Molecule:probable serine/threonine-protein kinase at5g41260;
PDBTitle: structure of the bsk8 kinase domain
117c5cwtC_
not modelled 22.5 19
PDB header:transport protein
Chain: C: PDB Molecule:nucleoporin nup57;
PDBTitle: crystal structure of chaetomium thermophilum nup57
118c4pehC_
not modelled 22.5 15
PDB header:hydrolase/rna
Chain: C: PDB Molecule:rna lariat debranching enzyme, putative;
PDBTitle: dbr1 in complex with synthetic linear rna
119c3hnwB_
not modelled 22.4 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
120c2pwzG_
not modelled 22.1 21
PDB header:oxidoreductase
Chain: G: PDB Molecule:malate dehydrogenase;
PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite