Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0008c_(-)_11874_12311
DateTue Jul 23 14:50:03 BST 2019
Unique Job ID69f19b4ac84fe1d3
SequenceMSEQVETRLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.789 Y:48.419 Z:23.254
Model (left) based on template c2n39A_
Top template information
PDB header:dna binding protein
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 1;
PDBTitle: nmr solution structure of a c-terminal domain of the chromodomain2 helicase dna-binding protein 1
Confidence and coverage
Confidence: 45.4% Coverage: 37%
54 residues ( 37% of your sequence) have been modelled with 45.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2n39A_



45.4 15
PDB header:dna binding protein
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 1;
PDBTitle: nmr solution structure of a c-terminal domain of the chromodomain2 helicase dna-binding protein 1
2c2kwuA_



20.5 42
PDB header:protein binding/signaling protein
Chain: A: PDB Molecule:dna polymerase iota;
PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin
3d1jhfa1



15.8 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
4d1g4ma1



13.5 38
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Arrestin/Vps26-like
5c3ajbB_



11.5 41
PDB header:protein transport
Chain: B: PDB Molecule:peroxisomal biogenesis factor 19;
PDBTitle: crystal structure of human pex3p in complex with n-terminal pex19p2 peptide
6c4h44E_



10.6 57
PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: 2.70 a cytochrome b6f complex structure from nostoc pcc 7120
7c2zt9E_



10.6 57
PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120
8c4ogqE_



10.6 57
PDB header:electron transport
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: internal lipid architecture of the hetero-oligomeric cytochrome b6f2 complex
9c5dwnC_



7.9 60
PDB header:transferase
Chain: C: PDB Molecule:phosphinothricin n-acetyltransferase;
PDBTitle: crystal structure of phosphinothricin n-acetyltransferase from2 brucella ovis in complex with acetylcoa
10c5lnkq_



7.6 36
PDB header:oxidoreductase
Chain: Q: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
11c5o31Z_



7.5 36
PDB header:oxidoreductase
Chain: Z: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: mitochondrial complex i in the deactive state
12c5ujqA_



7.2 37
PDB header:antimicrobial protein
Chain: A: PDB Molecule:bacteriocin;
PDBTitle: nmr solution structure of the two-component bacteriocin cbnxy
13c4rieB_



6.8 12
PDB header:transferase
Chain: B: PDB Molecule:glycosyl transferase homolog;
PDBTitle: landomycin glycosyltransferase langt2
14d1k28a3



6.5 17
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Phage lysozyme
15c2kbvA_



5.8 71
PDB header:membrane protein
Chain: A: PDB Molecule:sodium/hydrogen exchanger 1;
PDBTitle: structural and functional analysis of tm xi of the nhe12 isoform of the na+/h+ exchanger
16c5ed9A_



5.4 40
PDB header:transport protein
Chain: A: PDB Molecule:sun domain-containing protein 2;
PDBTitle: crystal structure of cc1 of mouse sun2
17c5uukB_



5.1 67
PDB header:apoptosis
Chain: B: PDB Molecule:bfl-1-specific selected peptide;
PDBTitle: human bfl-1 in complex with a bfl-1-specific selected peptide

Binding site prediction 

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