Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0018c_(ppp)_21637_23181
DateTue Jul 23 14:50:04 BST 2019
Unique Job ID801715f783d151f8
SequenceVARVTLVLRY ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.962 Y:43.823 Z:42.333
Model (left) based on template d1txoa_
Top template information
Fold:PP2C-like
Superfamily:PP2C-like
Family:PP2C-like
Confidence and coverage
Confidence:100.0% Coverage: 45%
233 residues ( 45% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1txoa_
100.0 97
Fold:PP2C-like
Superfamily:PP2C-like
Family:PP2C-like
2c2cm1A_
100.0 99
PDB header:hydrolase
Chain: A: PDB Molecule:serine threonine protein phosphatase pstp;
PDBTitle: crystal structure of the catalytic domain of serine2 threonine protein phosphatase pstp in complex with3 2 manganese ions.
3c2jfsA_
100.0 38
PDB header:hydrolase
Chain: A: PDB Molecule:ser-thr phosphatase mspp;
PDBTitle: crystal structure of the ppm ser-thr phosphatase mspp from2 mycobacterium smegmatis in complex with cacodylate
4c1a6qA_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatase 2c;
PDBTitle: crystal structure of the protein serine/threonine phosphatase 2c at 22 a resolution
5c4jndA_
100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:ca(2+)/calmodulin-dependent protein kinase phosphatase;
PDBTitle: structure of a c.elegans sex determining protein
6c5f1mA_
100.0 35
PDB header:hydrolase
Chain: A: PDB Molecule:phosphorylated protein phosphatase;
PDBTitle: crystal structure of serine/threonine phosphatase stp1 from2 staphylococcus aureus
7c6jkvB_
100.0 32
PDB header:hydrolase
Chain: B: PDB Molecule:pppa;
PDBTitle: pppa, a key regulatory component of t6ss in pseudomonas aeruginosa
8c2pk0C_
100.0 35
PDB header:signaling protein
Chain: C: PDB Molecule:serine/threonine protein phosphatase stp1;
PDBTitle: structure of the s. agalactiae serine/threonine phosphatase at 2.652 resolution
9c3ujgB_
100.0 24
PDB header:signaling protein
Chain: B: PDB Molecule:protein phosphatase 2c 16;
PDBTitle: crystal structure of snrk2.6 in complex with hab1
10c4yzhA_
100.0 22
PDB header:hydrolase/hydrolase substrate
Chain: A: PDB Molecule:protein phosphatase 2c 57;
PDBTitle: structure of the arabidopsis tap38/pph1 in complex with plhcb12 phosphopeptide substrate
11c4oicB_
100.0 25
PDB header:hormone receptor/hydrolase
Chain: B: PDB Molecule:probable protein phosphatase 2c 6;
PDBTitle: crystal structrual of a soluble protein
12c5gwpA_
100.0 27
PDB header:hydrolase/receptor
Chain: A: PDB Molecule:probable protein phosphatase 2c 50;
PDBTitle: crystal structure of rcar3:pp2c wild-type with (+)-aba
13d1a6qa2
100.0 21
Fold:PP2C-like
Superfamily:PP2C-like
Family:PP2C-like
14c2isnB_
100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:nysgxrc-8828z, phosphatase;
PDBTitle: crystal structure of a phosphatase from a pathogenic strain toxoplasma2 gondii
15c3kb3B_
100.0 23
PDB header:signaling protein
Chain: B: PDB Molecule:protein phosphatase 2c 16;
PDBTitle: crystal structure of abscisic acid-bound pyl2 in complex with hab1
16c4n0gB_
100.0 22
PDB header:hydrolase/receptor
Chain: B: PDB Molecule:protein phosphatase 2c 37;
PDBTitle: crystal structure of pyl13-pp2ca complex
17c3kdjB_
100.0 26
PDB header:hydrolase/hormone receptor
Chain: B: PDB Molecule:protein phosphatase 2c 56;
PDBTitle: complex structure of (+)-aba-bound pyl1 and abi1
18c2i44A_
100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:serine-threonine phosphatase 2c;
PDBTitle: crystal structure of serine-threonine phosphatase 2c from2 toxoplasma gondii
19c2i0oA_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:ser/thr phosphatase;
PDBTitle: crystal structure of anopheles gambiae ser/thr phosphatase complexed2 with zn2+
20c2iq1A_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:protein phosphatase 2c kappa, ppm1k;
PDBTitle: crystal structure of human ppm1k
21c4da1A_
not modelled 100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:protein phosphatase 1k, mitochondrial;
PDBTitle: crystal structure of branched-chain alpha-ketoacid dehydrogenase2 phosphatase with mg (ii) ions at the active site
22c2pnqA_
not modelled 100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]]-phosphatase
PDBTitle: crystal structure of pyruvate dehydrogenase phosphatase 12 (pdp1)
23c2j82A_
not modelled 100.0 37
PDB header:hydrolase
Chain: A: PDB Molecule:protein serine-threonine phosphatase;
PDBTitle: structural analysis of the pp2c family phosphatase tppha from2 thermosynechococcus elongatus
24c3d8kD_
not modelled 100.0 17
PDB header:hydrolase
Chain: D: PDB Molecule:protein phosphatase 2c;
PDBTitle: crystal structure of a phosphatase from a toxoplasma gondii
25c5nzzA_
not modelled 100.0 18
PDB header:transferase
Chain: A: PDB Molecule:tgf-beta-activated kinase 1 and map3k7-binding protein 1;
PDBTitle: crystal structure of phosphorylated p38amapk in complex with tab1
26c2irmA_
not modelled 100.0 19
PDB header:transferase
Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 7
PDBTitle: crystal structure of mitogen-activated protein kinase kinase kinase 72 interacting protein 1 from anopheles gambiae
27c3rnrB_
not modelled 100.0 24
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:stage ii sporulation e family protein;
PDBTitle: crystal structure of stage ii sporulation e family protein from2 thermanaerovibrio acidaminovorans
28c2pomA_
not modelled 100.0 18
PDB header:signaling protein/metal binding protein
Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 7-
PDBTitle: tab1 with manganese ion
29c2j4oA_
not modelled 100.0 18
PDB header:protein binding
Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 7-
PDBTitle: structure of tab1
30c6ae9B_
not modelled 100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:probable protein phosphatase 2c 1;
PDBTitle: x-ray structure of the photosystem ii phosphatase pbcp
31c3pu9A_
not modelled 99.9 25
PDB header:transferase
Chain: A: PDB Molecule:protein serine/threonine phosphatase;
PDBTitle: crystal structure of serine/threonine phosphatase sphaerobacter2 thermophilus dsm 20745
32c3zt9A_
not modelled 99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:serine phosphatase;
PDBTitle: the bacterial stressosome: a modular system that has been adapted to2 control secondary messenger signaling
33c5ucgE_
not modelled 99.8 21
PDB header:hydrolase
Chain: E: PDB Molecule:stage ii sporulation protein e;
PDBTitle: structure of the pp2c phosphatase domain and a fragment of the2 regulatory domain of the cell fate determinant spoiie from bacillus3 subtilis
34c3w43A_
not modelled 99.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase rsbx;
PDBTitle: crystal structure of rsbx in complex with manganese in space group p21
35c3t9qB_
not modelled 99.7 21
PDB header:hydrolase
Chain: B: PDB Molecule:stage ii sporulation protein e;
PDBTitle: structure of the phosphatase domain of the cell fate determinant2 spoiie from bacillus subtilis (mn presoaked)
36c6k4eB_
not modelled 99.3 18
PDB header:signaling protein
Chain: B: PDB Molecule:hamp domain-containing protein;
PDBTitle: siaa-pp2c domain of pseudomonas aeruginosa
37c3ke6A_
not modelled 99.1 17
PDB header:unknown function
Chain: A: PDB Molecule:protein rv1364c/mt1410;
PDBTitle: the crystal structure of the rsbu and rsbw domains of rv1364c from2 mycobacterium tuberculosis
38c3es2A_
not modelled 98.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:probable two-component response regulator;
PDBTitle: structure of the c-terminal phosphatase domain of p. aeruginonsa rssb
39c3eq2A_
not modelled 92.1 18
PDB header:signaling protein
Chain: A: PDB Molecule:probable two-component response regulator;
PDBTitle: structure of hexagonal crystal form of pseudomonas aeruginosa rssb
40c6od1A_
not modelled 79.3 20
PDB header:signaling protein
Chain: A: PDB Molecule:regulator of rpos;
PDBTitle: irad-bound to rssb d58p variant
41c3e59A_
not modelled 54.8 34
PDB header:transferase
Chain: A: PDB Molecule:pyoverdine biosynthesis protein pvca;
PDBTitle: crystal structure of the pvca (pa2254) protein from pseudomonas2 aeruginosa
42d1gpia_
not modelled 47.9 40
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
43c2l9mA_
not modelled 42.9 25
PDB header:apoptosis inhibitor
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 2;
PDBTitle: structure of ciap1 card
44c3nojA_
not modelled 42.9 16
PDB header:lyase
Chain: A: PDB Molecule:4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate
PDBTitle: the structure of hmg/cha aldolase from the protocatechuate degradation2 pathway of pseudomonas putida
45c1p4vA_
not modelled 41.4 17
PDB header:hydrolase
Chain: A: PDB Molecule:n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase
PDBTitle: crystal structure of the glycosylasparaginase precursor2 d151n mutant with glycine
46c3k4iC_
not modelled 40.3 20
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein pspto_3204 from2 pseudomonas syringae pv. tomato str. dc3000
47d1q9ha_
not modelled 40.1 40
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
48d1hq0a_
not modelled 39.0 25
Fold:CNF1/YfiH-like putative cysteine hydrolases
Superfamily:CNF1/YfiH-like putative cysteine hydrolases
Family:Type 1 cytotoxic necrotizing factor, catalytic domain
49c5cx3F_
not modelled 35.9 20
PDB header:protein binding
Chain: F: PDB Molecule:fyve and coiled-coil domain-containing protein 1;
PDBTitle: crystal structure of fyco1 lir in complex with lc3a
50c2o90A_
not modelled 34.8 25
PDB header:lyase
Chain: A: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: atomic resolution crystal structure of e.coli dihydroneopterin2 aldolase in complex with neopterin
51d2b3ga1
not modelled 33.5 39
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
52c5nygF_
not modelled 33.1 16
PDB header:hydrolase
Chain: F: PDB Molecule:anbu;
PDBTitle: anbu (gly-1) mutant from hyphomicrobium sp. strain mc1 - sg p2(1)2(1)2 2(1)
53d2d1pc1
not modelled 31.0 27
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrH-like
54c5cx3G_
not modelled 28.7 27
PDB header:protein binding
Chain: G: PDB Molecule:fyve and coiled-coil domain-containing protein 1;
PDBTitle: crystal structure of fyco1 lir in complex with lc3a
55c1k2xD_
not modelled 28.0 17
PDB header:hydrolase
Chain: D: PDB Molecule:putative l-asparaginase;
PDBTitle: crystal structure of putative asparaginase encoded by escherichia coli2 ybik gene
56c1k2xB_
not modelled 28.0 17
PDB header:hydrolase
Chain: B: PDB Molecule:putative l-asparaginase;
PDBTitle: crystal structure of putative asparaginase encoded by escherichia coli2 ybik gene
57c1jn9D_
not modelled 28.0 17
PDB header:hydrolase
Chain: D: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of putative asparaginase encoded by escherichia coli ybik2 gene
58c4y4vB_
not modelled 27.6 16
PDB header:hydrolase
Chain: B: PDB Molecule:conserved hypothetical secreted protein;
PDBTitle: structure of helicobacter pylori csd6 in the d-ala-bound state
59d2hy5c1
not modelled 26.9 21
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrH-like
60d1nbua_
not modelled 26.8 17
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
61c2kn6A_
not modelled 25.8 17
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis-associated speck-like protein containing a card;
PDBTitle: structure of full-length human asc (apoptosis-associated speck-like2 protein containing a card)
62c3v9oA_
not modelled 25.1 15
PDB header:lyase
Chain: A: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: crystal structure of dihydroneopterin aldolase (bth_i0291) from2 burkholderia thailendensis bound to guanine.
63c3vsjA_
not modelled 24.1 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit;
PDBTitle: crystal structure of 1,6-apd (2-animophenol-1,6-dioxygenase) complexed2 with intermediate products
64c2y9jt_
not modelled 23.7 20
PDB header:protein transport
Chain: T: PDB Molecule:protein prgh;
PDBTitle: three-dimensional model of salmonella's needle complex at subnanometer2 resolution
65d1b9la_
not modelled 23.2 10
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
66c1t3mD_
not modelled 23.1 20
PDB header:hydrolase
Chain: D: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli
67c1t3mB_
not modelled 23.1 20
PDB header:hydrolase
Chain: B: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli
68c1jn9B_
not modelled 23.1 20
PDB header:hydrolase
Chain: B: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of putative asparaginase encoded by escherichia coli ybik2 gene
69d1dgna_
not modelled 22.8 24
Fold:DEATH domain
Superfamily:DEATH domain
Family:Caspase recruitment domain, CARD
70d1dhna_
not modelled 22.7 17
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
71c3vsjB_
not modelled 22.4 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-amino-5-chlorophenol 1,6-dioxygenase beta subunit;
PDBTitle: crystal structure of 1,6-apd (2-animophenol-1,6-dioxygenase) complexed2 with intermediate products
72c2m0oA_
not modelled 21.9 31
PDB header:peptide binding protein
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: the solution structure of human phf1 in complex with h3k36me3
73c6drpB_
not modelled 21.6 15
PDB header:immune system
Chain: B: PDB Molecule:nlr family card domain-containing protein 4;
PDBTitle: cryo-em structures of asc and nlrc4 card filaments reveal a unified2 mechanism of nucleation and activation of caspase-1
74c3ohgA_
not modelled 21.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein from duf2233 family;
PDBTitle: crystal structure of a protein with unknown function from duf22332 family (bacova_00430) from bacteroides ovatus at 1.80 a resolution
75c3cqbB_
not modelled 20.8 17
PDB header:hydrolase
Chain: B: PDB Molecule:probable protease htpx homolog;
PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
76c2k2tA_
not modelled 20.2 45
PDB header:cell adhesion
Chain: A: PDB Molecule:micronemal protein 6;
PDBTitle: epidermal growth factor-like domain 2 from toxoplasma2 gondii microneme protein 6
77c5fnaD_
not modelled 19.6 14
PDB header:hydrolase
Chain: D: PDB Molecule:caspase-1;
PDBTitle: cryo-em reconstruction of caspase-1 card
78d1sqla_
not modelled 19.4 23
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
79c4iikA_
not modelled 18.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:adenosine monophosphate-protein hydrolase sidd;
PDBTitle: legionella pneumophila effector
80c5bxyB_
not modelled 18.3 18
PDB header:transferase
Chain: B: PDB Molecule:rna methyltransferase;
PDBTitle: crystal structure of rna methyltransferase from salinibacter ruber in2 complex with s-adenosyl-l-homocysteine
81c5k7lA_
not modelled 17.9 4
PDB header:metal transport/calcium binding protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: single particle cryo-em structure of the voltage-gated k+ channel eag12 bound to the channel inhibitor calmodulin
82c6qm8X_
not modelled 17.5 19
PDB header:hydrolase
Chain: X: PDB Molecule:proteasome beta3 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
83c2gacD_
not modelled 17.2 16
PDB header:hydrolase
Chain: D: PDB Molecule:glycosylasparaginase;
PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
84c3katA_
not modelled 17.1 15
PDB header:apoptosis
Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 1;
PDBTitle: crystal structure of the card domain of the human nlrp1 protein,2 northeast structural genomics consortium target hr3486e
85c5cx3E_
not modelled 17.1 27
PDB header:protein binding
Chain: E: PDB Molecule:fyve and coiled-coil domain-containing protein 1;
PDBTitle: crystal structure of fyco1 lir in complex with lc3a
86c1sqlN_
not modelled 16.9 23
PDB header:lyase
Chain: N: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: crystal structure of 7,8-dihydroneopterin aldolase in2 complex with guanine
87d1npea_
not modelled 16.3 9
Fold:6-bladed beta-propeller
Superfamily:YWTD domain
Family:YWTD domain
88c5mq9A_
not modelled 16.2 25
PDB header:translation
Chain: A: PDB Molecule:uncharacterized protein yacp;
PDBTitle: crystal structure of rae1 (yacp) from bacillus subtilis (w164l mutant)
89c4ebgA_
not modelled 16.0 31
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4467 family protein (sav0303) from2 staphylococcus aureus subsp. aureus mu50 at 1.35 a resolution
90c6j52A_
not modelled 15.8 18
PDB header:apoptosis
Chain: A: PDB Molecule:caspase recruitment domain-only protein;
PDBTitle: crystal structure of card-only protein in frog virus 3
91c4gduB_
not modelled 15.7 11
PDB header:hydrolase
Chain: B: PDB Molecule:l-asparaginase;
PDBTitle: crystal structure of sulfate-bound human l-asparaginase protein
92c3iddA_
not modelled 15.6 36
PDB header:isomerase
Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent
PDBTitle: cofactor-independent phosphoglycerate mutase from2 thermoplasma acidophilum dsm 1728
93c1zglQ_
not modelled 15.6 24
PDB header:immune system
Chain: Q: PDB Molecule:t cell receptor alpha chain;
PDBTitle: crystal structure of 3a6 tcr bound to mbp/hla-dr2a
94c2y9mB_
not modelled 15.4 18
PDB header:ligase/transport protein
Chain: B: PDB Molecule:peroxisome assembly protein 22;
PDBTitle: pex4p-pex22p structure
95c2eqjA_
not modelled 15.3 38
PDB header:transcription
Chain: A: PDB Molecule:metal-response element-binding transcription
PDBTitle: solution structure of the tudor domain of metal-response2 element-binding transcription factor 2
96c2n7zA_
not modelled 15.2 14
PDB header:transferase
Chain: A: PDB Molecule:receptor-interacting serine/threonine-protein kinase 2;
PDBTitle: solution structure of rip2 card
97c4j0nA_
not modelled 15.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:isatin hydrolase b;
PDBTitle: crystal structure of a manganese dependent isatin hydrolase
98c1nh2D_
not modelled 15.0 11
PDB header:transcription/dna
Chain: D: PDB Molecule:transcription initiation factor iia small chain;
PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex
99c5l3xB_
not modelled 14.9 20
PDB header:transcription
Chain: B: PDB Molecule:negative elongation factor c/d;
PDBTitle: crystal structure of negative elongation factor subcomplex nelf-ac

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Transmembrane helix prediction 

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