Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0038_(-)_41304_41912
DateTue Jul 23 14:50:06 BST 2019
Unique Job ID3a76cdc2ddcc4e92
SequenceVVAPHEDPED ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.419 Y:42.125 Z:44.380
Model (left) based on template d2gs5a1
Top template information
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
Confidence and coverage
Confidence:100.0% Coverage: 92%
185 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2gs5a1



100.0 42
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
2c2muiA_



100.0 26
PDB header:unknown function
Chain: A: PDB Molecule:upf0301 protein algh;
PDBTitle: solution structure of the algh protein from pseudomonas aeruginosa,2 pa0405, upf0301
3d2gzoa1



100.0 25
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
4c2aj2A_



100.0 29
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467;
PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8.
5d2ew0a1



100.0 24
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
6d2do8a1



100.0 24
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
7d2hafa1



100.0 30
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
8c6j4uA_



51.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:tubulinyl-tyr carboxypeptidase 1;
PDBTitle: structural basis of tubulin detyrosination by vasohibins-svbp enzyme2 complex and functional implications
9c6qbyA_



46.4 19
PDB header:cytosolic protein
Chain: A: PDB Molecule:tubulinyl-tyr carboxypeptidase 2;
PDBTitle: crystal structure of vash 2 in complex with svbp
10d1vpqa_



22.5 40
Fold:TIM beta/alpha-barrel
Superfamily:TM1631-like
Family:TM1631-like
11d2b78a1



12.7 15
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Hypothetical RNA methyltransferase domain (HRMD)
12c1byyA_



12.5 5
PDB header:membrane protein
Chain: A: PDB Molecule:protein (sodium channel alpha-subunit);
PDBTitle: sodium channel iia inactivation gate
13d1sy6a1



8.9 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
14c4lqlF_



8.8 14
PDB header:isomerase
Chain: F: PDB Molecule:l-arabinose isomerase;
PDBTitle: crystal structure of l-arabinose isomerase from lactobacillus2 fermentum cgmcc2921
15c2zjtB_



8.4 10
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase subunit b;
PDBTitle: crystal structure of dna gyrase b' domain sheds lights on the2 mechanism for t-segment navigation
16d1jl3a_



8.2 9
Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
17c4m7vA_



7.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrofolate reductase;
PDBTitle: dihydrofolate reductase from enterococcus faecalis complexed with2 nadp(h)and rab-propyl
18c6dy3G_



7.7 24
PDB header:hydrolase
Chain: G: PDB Molecule:n-acylethanolamine-hydrolyzing acid amidase alpha-subunit;
PDBTitle: caenorhabditis elegans n-acylethanolamine-hydrolyzing acid amidase2 (naaa) ortholog
19c6dy1A_



7.1 36
PDB header:hydrolase
Chain: A: PDB Molecule:n-acylethanolamine acid amidase alpha-subunit;
PDBTitle: rabbit n-acylethanolamine-hydrolyzing acid amidase (naaa) with fatty2 acid (myristate), in presence of triton x-100
20d2ajta2



6.9 15
Fold:FucI/AraA N-terminal and middle domains
Superfamily:FucI/AraA N-terminal and middle domains
Family:AraA N-terminal and middle domain-like
21c2eapA_



not modelled 6.6 21
PDB header:signaling protein
Chain: A: PDB Molecule:lymphocyte cytosolic protein 2;
PDBTitle: solution structure of the n-terminal sam-domain of human2 lymphocyte cytosolic protein 2
22d1jbja1



not modelled 6.3 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
23c5my7A_



not modelled 6.2 18
PDB header:cell adhesion
Chain: A: PDB Molecule:adhesin;
PDBTitle: adhesin complex protein from neisseria meningitidis
24c4qxzA_



not modelled 6.2 50
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein from staphylococcus aureus
25c6cxmA_



not modelled 5.9 14
PDB header:oxidoreductase/inhibitor
Chain: A: PDB Molecule:dihydrofolate reductase;
PDBTitle: crystal structure of a dihydrofolate reductase from mycobacterium2 smegmatis in complex with nadp and p218
26d1vm6a3



not modelled 5.8 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
27c6i52A_



not modelled 5.6 33
PDB header:dna binding protein
Chain: A: PDB Molecule:replication factor a protein 3;
PDBTitle: yeast rpa bound to ssdna
28c4p37A_



not modelled 5.3 23
PDB header:transferase
Chain: A: PDB Molecule:putative poly(a) polymerase catalytic subunit;
PDBTitle: crystal structure of the megavirus polyadenylate synthase
29c4a4fA_



not modelled 5.3 10
PDB header:rna binding protein
Chain: A: PDB Molecule:survival of motor neuron-related-splicing factor 30;
PDBTitle: solution structure of spf30 tudor domain in complex with symmetrically2 dimethylated arginine
30c4i5iA_



not modelled 5.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:nad-dependent protein deacetylase sirtuin-1;
PDBTitle: crystal structure of the sirt1 catalytic domain bound to nad and an2 ex527 analog

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