Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0058_(dnaB)_60393_63017
DateTue Jul 23 14:50:09 BST 2019
Unique Job ID1228c615ee4e645e
SequenceMAVVDDLAPG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.454 Y:65.877 Z:88.405
Model (left) based on template c4nmnA_
Top template information
PDB header:replication
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: aquifex aeolicus replicative helicase (dnab) complexed with adp, at2 3.3 resolution
Confidence and coverage
Confidence:100.0% Coverage: 43%
376 residues ( 43% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
796 residues ( 91%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4nmnA_
100.0 36
PDB header:replication
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: aquifex aeolicus replicative helicase (dnab) complexed with adp, at2 3.3 resolution
2c6qelB_
100.0 37
PDB header:replication
Chain: B: PDB Molecule:replicative dna helicase;
PDBTitle: e. coli dnabc apo complex
3c4zc0A_
100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: structure of a dodecameric bacterial helicase
4c2vyeA_
100.0 46
PDB header:hydrolase/dna
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: crystal structure of the dnac-ssdna complex
5c2q6tB_
100.0 44
PDB header:hydrolase
Chain: B: PDB Molecule:dnab replication fork helicase;
PDBTitle: crystal structure of the thermus aquaticus dnab monomer
6c3bgwD_
100.0 33
PDB header:replication
Chain: D: PDB Molecule:dnab-like replicative helicase;
PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase
7c6bbmA_
100.0 39
PDB header:replication
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: mechanisms of opening and closing of the bacterial replicative2 helicase: the dnab helicase and lambda p helicase loader complex
8c1dq3A_
100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease;
PDBTitle: crystal structure of an archaeal intein-encoded homing2 endonuclease pi-pfui
9c4a1fB_
100.0 37
PDB header:hydrolase
Chain: B: PDB Molecule:replicative dna helicase;
PDBTitle: crystal structure of c-terminal domain of helicobacter2 pylori dnab helicase
10c2cw8A_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease pi-pkoii;
PDBTitle: crystal structure of intein homing endonuclease ii
11c1vdeA_
100.0 17
PDB header:endonuclease
Chain: A: PDB Molecule:pi-scei;
PDBTitle: pi-scei, a homing endonuclease with protein splicing2 activity
12c3bh0A_
100.0 38
PDB header:replication
Chain: A: PDB Molecule:dnab-like replicative helicase;
PDBTitle: atpase domain of g40p
13c1q57G_
100.0 19
PDB header:transferase
Chain: G: PDB Molecule:dna primase/helicase;
PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7
14c2r5uD_
100.0 99
PDB header:hydrolase
Chain: D: PDB Molecule:replicative dna helicase;
PDBTitle: crystal structure of the n-terminal domain of dnab helicase from2 mycobacterium tuberculosis
15d1mi8a_
100.0 48
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Intein (protein splicing domain)
16c4o1rA_
99.9 49
PDB header:splicing
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: crystal structure of npudnab intein
17c1zd7B_
99.9 37
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii alpha subunit;
PDBTitle: 1.7 angstrom crystal structure of post-splicing form of a dnae intein2 from synechocystis sp. pcc 6803
18c4zc0D_
99.9 18
PDB header:hydrolase
Chain: D: PDB Molecule:replicative dna helicase;
PDBTitle: structure of a dodecameric bacterial helicase
19c2imzA_
99.9 50
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease pi-mtui;
PDBTitle: crystal structure of mtu reca intein splicing domain
20d1am2a_
99.9 36
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Intein (protein splicing domain)
21c5o9jB_
not modelled 99.9 30
PDB header:hydrolase
Chain: B: PDB Molecule:transcription initiation factor iib,transcription
PDBTitle: crystal structure of transcription factor iib mja mini-intein
22d1jwea_
not modelled 99.9 40
Fold:N-terminal domain of DnaB helicase
Superfamily:N-terminal domain of DnaB helicase
Family:N-terminal domain of DnaB helicase
23c2keqA_
not modelled 99.9 38
PDB header:splicing
Chain: A: PDB Molecule:dna polymerase iii alpha subunit, nucleic acid
PDBTitle: solution structure of dnae intein from nostoc punctiforme
24d1mo6a1
not modelled 99.9 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
25c3ldaA_
not modelled 99.9 18
PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein rad51;
PDBTitle: yeast rad51 h352y filament interface mutant
26d1cr2a_
not modelled 99.9 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
27c1szpC_
not modelled 99.9 21
PDB header:dna binding protein
Chain: C: PDB Molecule:dna repair protein rad51;
PDBTitle: a crystal structure of the rad51 filament
28c3io5B_
not modelled 99.9 18
PDB header:dna binding protein
Chain: B: PDB Molecule:recombination and repair protein;
PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4
29c2jmzA_
not modelled 99.9 32
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein mj0781;
PDBTitle: solution structure of a klba intein precursor from2 methanococcus jannaschii
30d1b79a_
not modelled 99.9 42
Fold:N-terminal domain of DnaB helicase
Superfamily:N-terminal domain of DnaB helicase
Family:N-terminal domain of DnaB helicase
31d1ubea1
not modelled 99.9 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
32c5jzcG_
not modelled 99.9 18
PDB header:dna binding protein
Chain: G: PDB Molecule:dna repair protein rad51 homolog 1;
PDBTitle: helical filament
33c4e2uA_
not modelled 99.9 31
PDB header:unknown function
Chain: A: PDB Molecule:pho rada intein;
PDBTitle: crystal structures of radamin intein from pyrococcus horikoshii
34c2in0A_
not modelled 99.9 42
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease pi-mtui;
PDBTitle: crystal structure of mtu reca intein splicing domain
35c2lcjA_
not modelled 99.9 31
PDB header:hydrolase
Chain: A: PDB Molecule:pab polc intein;
PDBTitle: solution nmr structure of pab polii intein
36c2dflA_
not modelled 99.9 13
PDB header:recombination
Chain: A: PDB Molecule:dna repair and recombination protein rada;
PDBTitle: crystal structure of left-handed rada filament
37c1t4gA_
not modelled 99.9 15
PDB header:recombination
Chain: A: PDB Molecule:dna repair and recombination protein rada;
PDBTitle: atpase in complex with amp-pnp
38c4o1sB_
not modelled 99.9 39
PDB header:splicing
Chain: B: PDB Molecule:v-type atp synthase alpha chain;
PDBTitle: crystal structure of tvovma intein
39c3gxvA_
not modelled 99.9 21
PDB header:hydrolase/replication
Chain: A: PDB Molecule:replicative dna helicase;
PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
40d1u94a1
not modelled 99.9 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
41c1pznA_
not modelled 99.9 16
PDB header:recombination
Chain: A: PDB Molecule:dna repair and recombination protein rad51;
PDBTitle: rad51 (rada)
42d1xp8a1
not modelled 99.9 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
43c2zroA_
not modelled 99.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:protein reca;
PDBTitle: msreca adp form iv
44d1dq3a1
not modelled 99.8 38
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Intein (protein splicing domain)
45c5z51A_
not modelled 99.8 11
PDB header:transferase
Chain: A: PDB Molecule:dna primase;
PDBTitle: helicase binding domain of primase from mycobacterium tuberculosis
46d1szpa2
not modelled 99.8 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
47c1xp8A_
not modelled 99.8 18
PDB header:dna binding protein
Chain: A: PDB Molecule:reca protein;
PDBTitle: deinococcus radiodurans reca in complex with atp-gamma-s
48c2recB_
not modelled 99.8 21
PDB header:helicase
PDB COMPND:
49c2ztsB_
not modelled 99.8 17
PDB header:atp-binding protein
Chain: B: PDB Molecule:putative uncharacterized protein ph0186;
PDBTitle: crystal structure of kaic-like protein ph0186 from hyperthermophilic2 archaea pyrococcus horikoshii ot3
50d1n0wa_
not modelled 99.8 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
51c1b24A_
not modelled 99.8 17
PDB header:intron-encoded
Chain: A: PDB Molecule:protein (i-dmoi);
PDBTitle: i-dmoi, intron-encoded endonuclease
52d1tf7a1
not modelled 99.8 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
53d2i1qa2
not modelled 99.8 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
54d1tf7a2
not modelled 99.8 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
55c2cvhB_
not modelled 99.8 20
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair and recombination protein radb;
PDBTitle: crystal structure of the radb recombinase
56c5lkmB_
not modelled 99.8 33
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair protein rada;
PDBTitle: rada bound to dtdp
57c3hr8A_
not modelled 99.8 18
PDB header:recombination
Chain: A: PDB Molecule:protein reca;
PDBTitle: crystal structure of thermotoga maritima reca
58d1v5wa_
not modelled 99.8 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
59c4ydsA_
not modelled 99.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:flagella-related protein h;
PDBTitle: flah from sulfolobus acidocaldarius with atp and mg-ion
60c2zjbB_
not modelled 99.8 15
PDB header:recombination
Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog;
PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant
61c1u9iA_
not modelled 99.7 14
PDB header:circadian clock protein
Chain: A: PDB Molecule:kaic;
PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites
62c2w0mA_
not modelled 99.7 21
PDB header:unknown function
Chain: A: PDB Molecule:sso2452;
PDBTitle: crystal structure of sso2452 from sulfolobus solfataricus p2
63d1dq3a4
not modelled 99.7 22
Fold:Homing endonuclease-like
Superfamily:Homing endonucleases
Family:Intein endonuclease
64c1pznG_
not modelled 99.7 15
PDB header:recombination
Chain: G: PDB Molecule:dna repair and recombination protein rad51;
PDBTitle: rad51 (rada)
65c2lwyA_
not modelled 99.7 37
PDB header:unknown function
Chain: A: PDB Molecule:bacterial intein-like domain;
PDBTitle: solution structure of bacterial intein-like domain from clostridium2 thermocellum
66d1nlfa_
not modelled 99.7 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
67c5ol5B_
not modelled 99.7 20
PDB header:splicing
Chain: B: PDB Molecule:dna polymerase iii subunit alpha,dna polymerase iii subunit
PDBTitle: crystal structure of an inactivated ssp siclopps intein with cfahpq2 extein
68d1pzna2
not modelled 99.7 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
69c5jwqA_
not modelled 99.7 15
PDB header:transcription regulator
Chain: A: PDB Molecule:circadian clock protein kinase kaic;
PDBTitle: crystal structure of kaic s431e in complex with foldswitch-stabilized2 kaib from thermosynechococcus elongatus
70c4wiaA_
not modelled 99.7 16
PDB header:atp-binding protein
Chain: A: PDB Molecule:putative flagella-related protein h;
PDBTitle: crystal structure of flagellar accessory protein flah from2 methanocaldococcus jannaschii
71d1jvaa3
not modelled 99.6 15
Fold:Homing endonuclease-like
Superfamily:Homing endonucleases
Family:Intein endonuclease
72c2r6cG_
not modelled 99.6 19
PDB header:replication
Chain: G: PDB Molecule:dnag primase, helicase binding domain;
PDBTitle: crystal form bh2
73c3cmuA_
not modelled 99.6 17
PDB header:recombination/dna
Chain: A: PDB Molecule:protein reca;
PDBTitle: mechanism of homologous recombination from the reca-ssdna/dsdna2 structures
74d1at0a_
not modelled 99.6 16
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Hedgehog C-terminal (Hog) autoprocessing domain
75c5ol7A_
not modelled 99.5 24
PDB header:splicing
Chain: A: PDB Molecule:dna-directed dna polymerase,dna-directed dna polymerase;
PDBTitle: crystal structure of an inactivated npu siclopps intein with cfahpq2 extein
76c2dr3A_
not modelled 99.5 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0273 protein ph0284;
PDBTitle: crystal structure of reca superfamily atpase ph0284 from pyrococcus2 horikoshii ot3
77c2lznA_
not modelled 99.5 14
PDB header:transferase
Chain: A: PDB Molecule:dna primase;
PDBTitle: solution structure of s. aureus primase c-terminal domain
78c3cmvG_
not modelled 99.4 22
PDB header:recombination
Chain: G: PDB Molecule:protein reca;
PDBTitle: mechanism of homologous recombination from the reca-ssdna/dsdna2 structures
79c3bs4A_
not modelled 99.2 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ph0321;
PDBTitle: crystal structure of uncharacterized protein ph0321 from pyrococcus2 horikoshii in complex with an unknown peptide
80c6bs8C_
not modelled 99.2 13
PDB header:hydrolase
Chain: C: PDB Molecule:replicative dna helicase;
PDBTitle: the class 3 dnab intein from mycobacterium smegmatis
81c3cmwA_
not modelled 99.1 18
PDB header:recombination/dna
Chain: A: PDB Molecule:protein reca;
PDBTitle: mechanism of homologous recombination from the reca-ssdna/dsdna2 structures
82d1oa8a_
not modelled 98.9 25
Fold:AXH domain
Superfamily:AXH domain
Family:AXH domain
83c3hyiA_
not modelled 98.8 19
PDB header:transcription regulator
Chain: A: PDB Molecule:protein duf199/whia;
PDBTitle: crystal structure of full-length duf199/whia from thermatoga maritima
84c3hyjD_
not modelled 98.2 14
PDB header:transcription regulator
Chain: D: PDB Molecule:protein duf199/whia;
PDBTitle: crystal structure of the n-terminal laglidadg domain of duf199/whia
85c2og2A_
not modelled 98.2 9
PDB header:protein transport
Chain: A: PDB Molecule:putative signal recognition particle receptor;
PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
86c2cnwF_
not modelled 98.1 16
PDB header:signal recognition
Chain: F: PDB Molecule:cell division protein ftsy;
PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
87c3b9qA_
not modelled 98.1 10
PDB header:protein transport
Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit
PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana
88c5gafi_
not modelled 98.0 15
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l10;
PDBTitle: rnc in complex with srp
89c2q9cA_
not modelled 98.0 15
PDB header:signaling protein
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of ftsy:gmppnp with mgcl complex
90c1vmaA_
not modelled 97.9 15
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution
91c6cy1B_
not modelled 97.9 12
PDB header:signaling protein
Chain: B: PDB Molecule:signal recognition particle receptor ftsy;
PDBTitle: crystal structure of signal recognition particle receptor ftsy from2 elizabethkingia anophelis
92c4ak9A_
not modelled 97.9 13
PDB header:protein transport
Chain: A: PDB Molecule:cpftsy;
PDBTitle: structure of chloroplast ftsy from physcomitrella patens
93c2yhsA_
not modelled 97.9 19
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of the e. coli srp receptor ftsy
94c5l3qB_
not modelled 97.8 10
PDB header:protein transport
Chain: B: PDB Molecule:signal recognition particle receptor subunit alpha;
PDBTitle: structure of the gtpase heterodimer of human srp54 and sralpha
95c2qy9A_
not modelled 97.8 15
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
96c2j7pA_
not modelled 97.8 17
PDB header:signal recognition
Chain: A: PDB Molecule:signal recognition particle protein;
PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
97c5l3sF_
not modelled 97.8 14
PDB header:protein transport
Chain: F: PDB Molecule:signal recognition particle receptor ftsy;
PDBTitle: structure of the gtpase heterodimer of crenarchaeal srp54 and ftsy
98c2qmoA_
not modelled 97.7 15
PDB header:ligase
Chain: A: PDB Molecule:dethiobiotin synthetase;
PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori
99c5l3rC_
not modelled 97.7 12
PDB header:protein transport
Chain: C: PDB Molecule:signal recognition particle 54 kda protein, chloroplastic;
PDBTitle: structure of the gtpase heterodimer of chloroplast srp54 and ftsy from2 arabidopsis thaliana
100d1gppa_
not modelled 97.7 23
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Intein (protein splicing domain)
101c3dmdA_
not modelled 97.7 12
PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle receptor;
PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
102d1jvaa1
not modelled 97.6 23
Fold:Hedgehog/intein (Hint) domain
Superfamily:Hedgehog/intein (Hint) domain
Family:Intein (protein splicing domain)
103d1skye3
not modelled 97.5 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
104c2j37W_
not modelled 97.5 17
PDB header:ribosome
Chain: W: PDB Molecule:signal recognition particle 54 kda protein (srp54);
PDBTitle: model of mammalian srp bound to 80s rncs
105c1zu4A_
not modelled 97.5 12
PDB header:protein transport
Chain: A: PDB Molecule:ftsy;
PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
106c3fkqA_
not modelled 97.5 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ntrc-like two-domain protein;
PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution
107c2j289_
not modelled 97.4 14
PDB header:ribosome
Chain: 9: PDB Molecule:signal recognition particle 54;
PDBTitle: model of e. coli srp bound to 70s rncs
108c1v06A_
not modelled 97.4 20
PDB header:dna-binding protein
Chain: A: PDB Molecule:hmg box-containing protein 1;
PDBTitle: axh domain of the transcription factor hbp1 from m.musculus
109c2v3cC_
not modelled 97.4 16
PDB header:signaling protein
Chain: C: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
110c1r7mA_
not modelled 97.3 8
PDB header:hydrolase/dna
Chain: A: PDB Molecule:intron-encoded endonuclease i-scei;
PDBTitle: the homing endonuclease i-scei bound to its dna recognition2 region
111c6ah0D_
not modelled 97.3 22
PDB header:splicing
Chain: D: PDB Molecule:u5 small nuclear ribonucleoprotein 200 kda helicase;
PDBTitle: the cryo-em structure of the precusor of human pre-catalytic2 spliceosome (pre-b complex)
112d1x6va3
not modelled 97.3 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
113c3fmfA_
not modelled 97.3 10
PDB header:ligase
Chain: A: PDB Molecule:dethiobiotin synthetase;
PDBTitle: crystal structure of mycobacterium tuberculosis dethiobiotin2 synthetase complexed with 7,8 diaminopelargonic acid carbamate
114c1qzwC_
not modelled 97.3 16
PDB header:signaling protein/rna
Chain: C: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
115c3jcrC_
not modelled 97.2 23
PDB header:splicing
Chain: C: PDB Molecule:hbrr2;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
116c2dchX_
not modelled 97.2 21
PDB header:hydrolase
Chain: X: PDB Molecule:putative homing endonuclease;
PDBTitle: crystal structure of archaeal intron-encoded homing endonuclease i-2 tsp061i
117c4f92B_
not modelled 97.2 16
PDB header:hydrolase
Chain: B: PDB Molecule:u5 small nuclear ribonucleoprotein 200 kda helicase;
PDBTitle: brr2 helicase region s1087l
118c2i1vB_
not modelled 97.2 11
PDB header:transferase, hydrolase
Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6-
PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate
119c5dcaA_
not modelled 97.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:pre-mrna-splicing helicase brr2;
PDBTitle: crystal structure of yeast full length brr2 in complex with prp8 jab12 domain
120c5do7B_
not modelled 97.2 17
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 8;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite