Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0059_(-)_63197_63889
DateTue Jul 23 14:50:09 BST 2019
Unique Job ID5a007523a0c69c00
SequenceMITRYKPESG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.520 Y:30.011 Z:39.772
Model (left) based on template d1wfxa_
Top template information
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Tpt1/KptA
Confidence and coverage
Confidence: 95.8% Coverage: 34%
79 residues ( 34% of your sequence) have been modelled with 95.8% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1wfxa_



95.8 19
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Tpt1/KptA
2c6edeA_



95.7 19
PDB header:transferase
Chain: A: PDB Molecule:probable rna 2'-phosphotransferase;
PDBTitle: trna 2'-phosphotransferase
3d1gs0a2



90.4 23
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
4c2paxA_



87.8 22
PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase;
PDBTitle: the catalytic fragment of poly(adp-ribose) polymerase2 complexed with 4-amino-1,8-naphthalimide
5c1gs0B_



87.4 23
PDB header:transferase
Chain: B: PDB Molecule:poly (adp-ribose) polymerase-2;
PDBTitle: crystal structure of the catalytic fragment of murine poly2 (adp-ribose) polymerase-2
6d2rd6a2



84.5 27
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
7c3c4hA_



81.5 24
PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase 3;
PDBTitle: human poly(adp-ribose) polymerase 3, catalytic fragment in complex2 with an inhibitor dr2313
8c4dqyF_



81.4 22
PDB header:transferase/dna
Chain: F: PDB Molecule:poly [adp-ribose] polymerase 1;
PDBTitle: structure of human parp-1 bound to a dna double strand break
9d1efya2



79.8 22
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
10c2x5yA_



66.6 11
PDB header:immune system
Chain: A: PDB Molecule:zinc finger ccch-type antiviral protein 1;
PDBTitle: human zc3hav1 (artd13), c-terminal domain
11c3goyD_



62.8 22
PDB header:transferase/transferase inhibitor
Chain: D: PDB Molecule:poly [adp-ribose] polymerase 14;
PDBTitle: crystal structure of human poly(adp-ribose) polymerase 14, catalytic2 fragment in complex with an inhibitor 3-aminobenzamide
12c3bljA_



58.8 26
PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase 15;
PDBTitle: crystal structure of human poly(adp-ribose) polymerase 15, catalytic2 fragment
13c5ngoA_



58.3 16
PDB header:plant protein
Chain: A: PDB Molecule:inactive poly [adp-ribose] polymerase rcd1;
PDBTitle: crystal structure of the parp domain of arabidopsis radical-induced2 cell death1
14c3hkvA_



55.2 27
PDB header:transferase
Chain: A: PDB Molecule:poly [adp-ribose] polymerase 10;
PDBTitle: human poly(adp-ribose) polymerase 10, catalytic fragment in complex2 with an inhibitor 3-aminobenzamide
15c2pqfF_



52.8 21
PDB header:transferase
Chain: F: PDB Molecule:poly [adp-ribose] polymerase 12;
PDBTitle: human poly(adp-ribose) polymerase 12, catalytic fragment in complex2 with an inhibitor 3-aminobenzoic acid
16c1s1iL_



46.8 19
PDB header:ribosome
Chain: L: PDB Molecule:60s ribosomal protein l15-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
17c3j39N_



41.9 31
PDB header:ribosome
Chain: N: PDB Molecule:60s ribosomal protein l15;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
18d2o0qa1



35.6 11
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:CC0527-like
19c3zf7Q_



31.0 31
PDB header:ribosome
Chain: Q: PDB Molecule:ribosomal protein l15;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
20c3mhkA_



27.6 23
PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: human tankyrase 2 - catalytic parp domain in complex with 2-(2-2 pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
21c6j7jA_



not modelled 20.3 22
PDB header:transferase
Chain: A: PDB Molecule:pseudomonas aeruginosa earp;
PDBTitle: crystal structure of pseudomonas aeruginosa earp
22d1vf5b_



not modelled 19.8 23
Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
23d1lt3a_



not modelled 18.0 18
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
24d2a5db1



not modelled 17.3 12
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
25d1q90d_



not modelled 15.3 23
Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
26c1tiiA_



not modelled 15.1 18
PDB header:enterotoxin
Chain: A: PDB Molecule:heat labile enterotoxin type iib;
PDBTitle: escherichia coli heat labile enterotoxin type iib
27c4z9dA_



not modelled 14.7 21
PDB header:transferase
Chain: A: PDB Molecule:pertussis toxin-like subunit arta;
PDBTitle: ecplta
28d2e74b1



not modelled 14.4 23
Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
29c4n7vB_



not modelled 14.1 28
PDB header:cell cycle
Chain: B: PDB Molecule:serine/threonine-protein kinase plk4;
PDBTitle: crystal structure of human plk4 cryptic polo box (cpb) in complex with2 a cep152 n-terminal fragment
30c5d0qC_



not modelled 12.8 15
PDB header:protein transport
Chain: C: PDB Molecule:outer membrane protein assembly factor bamc;
PDBTitle: bamacde complex, outer membrane beta-barrel assembly machinery (bam)2 complex
31d1s5da_



not modelled 12.5 18
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
32d1lvaa3



not modelled 11.1 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal fragment of elongation factor SelB
33c4qo6A_



not modelled 9.9 15
PDB header:structural protein
Chain: A: PDB Molecule:adenylate cyclase-like protein;
PDBTitle: structural studies of cdsd, a structural protein of the type iii2 secretion system (ttss) of chlamydia trachomatis
34c3cwbC_



not modelled 9.7 24
PDB header:oxidoreductase
Chain: C: PDB Molecule:cytochrome b;
PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d
35d1gmnb1



not modelled 9.6 31
Fold:Hairpin loop containing domain-like
Superfamily:Hairpin loop containing domain-like
Family:Hairpin loop containing domain
36c3nffD_



not modelled 9.2 14
PDB header:transcription
Chain: D: PDB Molecule:rna polymerase i subunit a34.5;
PDBTitle: crystal structure of extended dimerization module of rna polymerase i2 subcomplex a49/a34.5
37d1ffki_



not modelled 9.1 38
Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L15e
38c3cx5N_



not modelled 8.8 19
PDB header:oxidoreductase
Chain: N: PDB Molecule:cytochrome b;
PDBTitle: structure of complex iii with bound cytochrome c in reduced state and2 definition of a minimal core interface for electron transfer.
39c1b8xA_



not modelled 8.7 37
PDB header:signal protein
Chain: A: PDB Molecule:protein (aml-1b);
PDBTitle: glutathione s-transferase fused with the nuclear matrix targeting2 signal of the transcription factor aml-1
40c2rf5A_



not modelled 8.6 29
PDB header:transferase
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of human tankyrase 1- catalytic parp domain
41c4f0dB_



not modelled 8.3 22
PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:poly [adp-ribose] polymerase 16;
PDBTitle: human artd15/parp16 in complex with 3-aminobenzamide
42c3iz5P_



not modelled 7.8 31
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l15 (l15e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
43c2qjkM_



not modelled 7.7 14
PDB header:electron transport
Chain: M: PDB Molecule:cytochrome b;
PDBTitle: crystal structure analysis of mutant rhodobacter2 sphaeroides bc1 with stigmatellin and antimycin
44c3ecsD_



not modelled 7.6 15
PDB header:translation
Chain: D: PDB Molecule:translation initiation factor eif-2b subunit alpha;
PDBTitle: crystal structure of human eif2b alpha
45c4hl5A_



not modelled 7.5 24
PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: complex structure of human tankyrase 2 with 7-hydroxy -4'-2 methoxyflavone
46c2jz5A_



not modelled 7.1 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein vpa0419;
PDBTitle: nmr solution structure of protein vpa0419 from vibrio2 parahaemolyticus. northeast structural genomics target3 vpr68
47c5dazA_



not modelled 6.7 23
PDB header:transferase
Chain: A: PDB Molecule:scabin;
PDBTitle: crystal structure of scabin, a mono-adp-ribosyltransferase from2 streptomyces scabies
48c6blhG_



not modelled 6.6 23
PDB header:viral protein/immune system
Chain: G: PDB Molecule:major surface glycoprotein g;
PDBTitle: rsv g central conserved region bound to fab cb017.5
49c4a1cL_



not modelled 6.0 28
PDB header:ribosome
Chain: L: PDB Molecule:ribosomal protein l15;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
50c4g7nB_



not modelled 6.0 36
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase plk4;
PDBTitle: the structure of the plk4 cryptic polo box reveals two tandem polo2 boxes required for centriole duplication
51c6bliF_



not modelled 5.9 27
PDB header:viral protein/immune system
Chain: F: PDB Molecule:major surface glycoprotein g;
PDBTitle: rsv g peptide bound to fab cb002.5
52d1d0na5



not modelled 5.7 10
Fold:Gelsolin-like
Superfamily:Actin depolymerizing proteins
Family:Gelsolin-like
53c3oc5A_



not modelled 5.7 13
PDB header:cell adhesion
Chain: A: PDB Molecule:toxin coregulated pilus biosynthesis protein f;
PDBTitle: crystal structure of the vibrio cholerae secreted colonization factor2 tcpf
54c6bliI_



not modelled 5.5 27
PDB header:viral protein/immune system
Chain: I: PDB Molecule:major surface glycoprotein g;
PDBTitle: rsv g peptide bound to fab cb002.5
55d1bg5a1



not modelled 5.4 35
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
56c1xmaA_



not modelled 5.3 22
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulator;
PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
57d1xmaa_



not modelled 5.3 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like

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