Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0078B_(RVBD0078B)_87795_88001
DateTue Jul 23 14:50:11 BST 2019
Unique Job IDa627de62acd66210
SequenceVAVSVAAQKL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.861 Y:68.364 Z:40.225
Model (left) based on template c5mz6B_
Top template information
PDB header:cell cycle
Chain: B: PDB Molecule:interactor of fizzy protein;
PDBTitle: cryo-em structure of a separase-securin complex from caenorhabditis2 elegans at 3.8 a resolution
Confidence and coverage
Confidence: 19.6% Coverage: 56%
38 residues ( 56% of your sequence) have been modelled with 19.6% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5mz6B_



19.6 37
PDB header:cell cycle
Chain: B: PDB Molecule:interactor of fizzy protein;
PDBTitle: cryo-em structure of a separase-securin complex from caenorhabditis2 elegans at 3.8 a resolution
2c2f9jP_



18.0 55
PDB header:rna binding protein
Chain: P: PDB Molecule:splicing factor 3b subunit 1;
PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155
3d2dk8a1



16.8 67
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:RPO3F domain-like
4c3bmzA_



16.5 32
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: violacein biosynthetic enzyme vioe
5c3kevA_



14.4 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:galieria sulfuraria dcun1 domain-containing protein;
PDBTitle: x-ray crystal structure of a dcun1 domain-containing protein from2 galdieria sulfuraria
6c6gu1B_



13.9 47
PDB header:unknown function
Chain: B: PDB Molecule:secreted rxlr effector peptide protein, putative;
PDBTitle: sfi3 effector protein from the oomycete plant pathogen phytophthora2 infestans
7c5ewnA_



13.0 29
PDB header:viral protein
Chain: A: PDB Molecule:structural protein;
PDBTitle: crystal structure of the human astrovirus 1 capsid protein core domain2 at 2.6 a resolution
8c3b1sC_



12.0 35
PDB header:protein transport
Chain: C: PDB Molecule:flagellar biosynthetic protein flhb;
PDBTitle: crystal structure of the cytoplasmic domain of flhb from aquifex2 aeolicus
9d2hg6a1



11.7 67
Fold:PA1123-like
Superfamily:PA1123-like
Family:PA1123-like
10c3b1sA_



11.4 35
PDB header:protein transport
Chain: A: PDB Molecule:flagellar biosynthetic protein flhb;
PDBTitle: crystal structure of the cytoplasmic domain of flhb from aquifex2 aeolicus
11c3b1sE_



10.9 35
PDB header:protein transport
Chain: E: PDB Molecule:flagellar biosynthetic protein flhb;
PDBTitle: crystal structure of the cytoplasmic domain of flhb from aquifex2 aeolicus
12c5v89A_



10.8 18
PDB header:ligase / protein binding
Chain: A: PDB Molecule:dcn1-like protein 4;
PDBTitle: structure of dcn4 pony domain bound to cul1 whb
13c3bq3A_



9.9 19
PDB header:cell cycle, ligase
Chain: A: PDB Molecule:defective in cullin neddylation protein 1;
PDBTitle: crystal structure of s. cerevisiae dcn1
14c4gaoA_



9.5 19
PDB header:ligase/peptide
Chain: A: PDB Molecule:dcn1-like protein 2;
PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
15c6g90Q_



9.0 24
PDB header:splicing
Chain: Q: PDB Molecule:cold sensitive u2 snrna suppressor 1;
PDBTitle: prespliceosome structure provides insight into spliceosome assembly2 and regulation (map a2)
16c2z5hT_



8.1 37
PDB header:contractile protein
Chain: T: PDB Molecule:troponin t, fast skeletal muscle isoforms;
PDBTitle: crystal structure of the head-to-tail junction of tropomyosin2 complexed with a fragment of tnt
17c5gneA_



7.5 33
PDB header:hydrolase
Chain: A: PDB Molecule:leucine aminopeptidase;
PDBTitle: crystal structure of lapb from legionella pneumophila
18d1s4ka_



7.1 19
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:YdiL-like
19c3gliO_



6.6 47
PDB header:transferase/dna
Chain: O: PDB Molecule:dna polymerase iii subunit psi;
PDBTitle: crystal structure of the e. coli clamp loader bound to primer-template2 dna and psi peptide
20c2is9A_



6.6 19
PDB header:transcription
Chain: A: PDB Molecule:defective in cullin neddylation protein 1;
PDBTitle: structure of yeast dcn-1
21c3gliP_



not modelled 6.5 47
PDB header:transferase/dna
Chain: P: PDB Molecule:dna polymerase iii subunit psi;
PDBTitle: crystal structure of the e. coli clamp loader bound to primer-template2 dna and psi peptide
22c4gbaA_



not modelled 6.4 22
PDB header:ligase/peptide
Chain: A: PDB Molecule:dcn1-like protein 3;
PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
23c6eslB_



not modelled 6.1 30
PDB header:hydrolase
Chain: B: PDB Molecule:bacterial leucyl aminopeptidase;
PDBTitle: crystal structure of the legionella pneumoppila lapa
24d2c2la2



not modelled 5.9 24
Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
25c6qfmB_



not modelled 5.6 56
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-binding component 3;
PDBTitle: structure of human mcl-1 in complex with puma bh3 peptide
26c6k4eB_



not modelled 5.5 16
PDB header:signaling protein
Chain: B: PDB Molecule:hamp domain-containing protein;
PDBTitle: siaa-pp2c domain of pseudomonas aeruginosa
27c4hnjC_



not modelled 5.4 56
PDB header:apoptosis/protein binding
Chain: C: PDB Molecule:bcl-2-binding component 3;
PDBTitle: crystallographic structure of bcl-xl domain-swapped dimer in complex2 with puma bh3 peptide at 2.9a resolution
28c6qg8B_



not modelled 5.2 56
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-binding component 3;
PDBTitle: structure of human bcl-2 in complex with puma bh3 peptide

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