1 c3ka5A_
99.7
15
PDB header: chaperoneChain: A: PDB Molecule: ribosome-associated protein y (psrp-1);
PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a
2 c3k2tA_
99.6
24
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: lmo2511 protein;
PDBTitle: crystal structure of lmo2511 protein from listeria2 monocytogenes, northeast structural genomics consortium3 target lkr84a
3 c3lyvF_
99.6
28
PDB header: chaperoneChain: F: PDB Molecule: ribosome-associated factor y;
PDBTitle: crystal structure of a domain of ribosome-associated factor y from2 streptococcus pyogenes serotype m6. northeast structural genomics3 consortium target id dr64a
4 c6dzkY_
99.0
16
PDB header: ribosomeChain: Y: PDB Molecule: ribosome hibernation promoting factor;
PDBTitle: cryo-em structure of mycobacterium smegmatis c(minus) 30s ribosomal2 subunit with mpy
5 d1l4sa_
99.0
9
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
6 c3tqmD_
99.0
13
PDB header: protein bindingChain: D: PDB Molecule: ribosome-associated factor y;
PDBTitle: structure of an ribosomal subunit interface protein from coxiella2 burnetii
7 d2ywqa1
98.9
16
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
8 c2rqlA_
98.9
13
PDB header: translationChain: A: PDB Molecule: probable sigma-54 modulation protein;
PDBTitle: solution structure of the e. coli ribosome hibernation2 promoting factor hpf
9 c4fylB_
98.9
14
PDB header: translationChain: B: PDB Molecule: ribosome hibernation protein yhbh;
PDBTitle: high-resolution x-ray structure of hpf from vibrio cholerae
10 c6qbzA_
98.8
10
PDB header: ribosomal proteinChain: A: PDB Molecule: ribosome hibernation promoting factor;
PDBTitle: solution structure of the n-terminal domain of the staphylococcus2 aureus hibernation promoting factor
11 c5mmjy_
98.8
12
PDB header: ribosomeChain: Y: PDB Molecule:
PDBTitle: structure of the small subunit of the chloroplast ribosome
12 d1imua_
98.7
14
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
13 d2k0bx1
38.1
14
Fold: RuvA C-terminal domain-likeSuperfamily: UBA-likeFamily: UBA domain
14 c4gi3C_
31.9
30
PDB header: hydrolase/hydrolase inhibitorChain: C: PDB Molecule: greglin;
PDBTitle: crystal structure of greglin in complex with subtilisin
15 c2jy8A_
30.2
14
PDB header: protein bindingChain: A: PDB Molecule: ubiquitin-binding protein p62;
PDBTitle: nmr structure of the ubiquitin associated (uba) domain of2 p62 (sqstm1) in complex with ubiquitin. rdc refined
16 c1oheA_
28.8
27
PDB header: hydrolaseChain: A: PDB Molecule: cdc14b2 phosphatase;
PDBTitle: structure of cdc14b phosphatase with a peptide ligand
17 d1ohea1
27.0
27
Fold: (Phosphotyrosine protein) phosphatases IISuperfamily: (Phosphotyrosine protein) phosphatases IIFamily: Dual specificity phosphatase-like
18 c3a9lB_
25.6
13
PDB header: hydrolaseChain: B: PDB Molecule: poly-gamma-glutamate hydrolase;
PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase
19 c5boiA_
22.8
29
PDB header: unknown functionChain: A: PDB Molecule: germination protein ypeb;
PDBTitle: bacillus megaterium ypeb c-terminal domain
20 c1gshA_
19.9
17
PDB header: glutathione biosynthesis ligaseChain: A: PDB Molecule: glutathione biosynthetic ligase;
PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5
21 d2ae8a2
not modelled
19.5
21
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Imidazole glycerol phosphate dehydratase
22 c6c0fv_
not modelled
19.1
17
PDB header: ribosomeChain: V: PDB Molecule: 60s ribosomal protein l23-a;
PDBTitle: yeast nucleolar pre-60s ribosomal subunit (state 2)
23 d1yrea1
not modelled
18.3
7
Fold: Acyl-CoA N-acyltransferases (Nat)Superfamily: Acyl-CoA N-acyltransferases (Nat)Family: N-acetyl transferase, NAT
24 c3cp3A_
not modelled
16.6
11
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae
25 c2j44A_
not modelled
15.1
45
PDB header: carbohydrate-binding moduleChain: A: PDB Molecule: alkaline amylopullulanase;
PDBTitle: alpha-glucan binding by a streptococcal virulence factor
26 d2f1da2
not modelled
15.0
19
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Imidazole glycerol phosphate dehydratase
27 c4k90B_
not modelled
14.7
31
PDB header: hydrolaseChain: B: PDB Molecule: extracellular metalloproteinase mep;
PDBTitle: extracellular metalloproteinase from aspergillus
28 c2zkqi_
not modelled
13.1
19
PDB header: ribosomal protein/rnaChain: I: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
29 d2bm0a4
not modelled
13.0
29
Fold: Ferredoxin-likeSuperfamily: EF-G C-terminal domain-likeFamily: EF-G/eEF-2 domains III and V
30 d1m0wa1
not modelled
12.8
28
Fold: PreATP-grasp domainSuperfamily: PreATP-grasp domainFamily: Eukaryotic glutathione synthetase, substrate-binding domain
31 c4v19W_
not modelled
12.0
28
PDB header: ribosomeChain: W: PDB Molecule: mitoribosomal protein ul22m, mrpl22;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
32 c3r9jD_
not modelled
11.9
10
PDB header: cell cycle,hydrolase/cell cycleChain: D: PDB Molecule: cell division topological specificity factor;
PDBTitle: 4.3a resolution structure of a mind-mine(i24n) protein complex
33 c2f46A_
not modelled
11.8
12
PDB header: hydrolaseChain: A: PDB Molecule: hypothetical protein;
PDBTitle: crystal structure of a putative phosphatase (nma1982) from neisseria2 meningitidis z2491 at 1.41 a resolution
34 d1kyqa2
not modelled
11.7
4
Fold: Siroheme synthase middle domains-likeSuperfamily: Siroheme synthase middle domains-likeFamily: Siroheme synthase middle domains-like
35 c2m2kA_
not modelled
11.5
15
PDB header: transport proteinChain: A: PDB Molecule: hasb protein;
PDBTitle: the structure of hasb ctd
36 c3be3A_
not modelled
11.4
43
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to pfam duf16532 from bordetella bronchiseptica
37 c2j43A_
not modelled
11.3
18
PDB header: carbohydrate-binding moduleChain: A: PDB Molecule: spydx;
PDBTitle: alpha-glucan recognition by family 41 carbohydrate-binding2 modules from streptococcal virulence factors
38 d1ev0a_
not modelled
11.2
9
Fold: Cell division protein MinE topological specificity domainSuperfamily: Cell division protein MinE topological specificity domainFamily: Cell division protein MinE topological specificity domain
39 d1rhya2
not modelled
11.0
22
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Imidazole glycerol phosphate dehydratase
40 c4iwyA_
not modelled
10.5
27
PDB header: ligaseChain: A: PDB Molecule: ribosomal protein s6 modification protein;
PDBTitle: semet-substituted rimk structure
41 c4l6wA_
not modelled
10.3
21
PDB header: ligaseChain: A: PDB Molecule: probable propionyl-coa carboxylase beta chain 6;
PDBTitle: carboxyltransferase subunit (accd6) of mycobacterium tuberculosis2 acetyl-coa carboxylase
42 c4c1aC_
not modelled
10.2
15
PDB header: hydrolaseChain: C: PDB Molecule: orf1-encoded protein;
PDBTitle: coiled coil domain of the zfl2-1 orf1 protein from the2 zebrafish zfl2-1 retrotransposon
43 c4c1aB_
not modelled
10.2
15
PDB header: hydrolaseChain: B: PDB Molecule: orf1-encoded protein;
PDBTitle: coiled coil domain of the zfl2-1 orf1 protein from the2 zebrafish zfl2-1 retrotransposon
44 c4c1aA_
not modelled
10.2
15
PDB header: hydrolaseChain: A: PDB Molecule: orf1-encoded protein;
PDBTitle: coiled coil domain of the zfl2-1 orf1 protein from the2 zebrafish zfl2-1 retrotransposon
45 d1fx7a3
not modelled
10.0
28
Fold: SH3-like barrelSuperfamily: C-terminal domain of transcriptional repressorsFamily: FeoA-like
46 c3rkxA_
not modelled
9.9
15
PDB header: ligaseChain: A: PDB Molecule: biotin-[acetyl-coa-carboxylase] ligase;
PDBTitle: structural characterisation of staphylococcus aureus biotin protein2 ligase
47 c3n6rF_
not modelled
9.8
22
PDB header: ligaseChain: F: PDB Molecule: propionyl-coa carboxylase, beta subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
48 c5xw4A_
not modelled
9.8
27
PDB header: cell cycleChain: A: PDB Molecule: tyrosine-protein phosphatase cdc14;
PDBTitle: crystal structure of budding yeast cdc14p (wild type) in the apo state
49 c2ftcM_
not modelled
9.7
28
PDB header: ribosomeChain: M: PDB Molecule: mitochondrial ribosomal protein l22 isoform a;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
50 d2dy1a4
not modelled
9.5
25
Fold: Ferredoxin-likeSuperfamily: EF-G C-terminal domain-likeFamily: EF-G/eEF-2 domains III and V
51 c3jywN_
not modelled
9.4
6
PDB header: ribosomeChain: N: PDB Molecule: 60s ribosomal protein l17(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
52 c1s1hI_
not modelled
9.2
27
PDB header: ribosomeChain: I: PDB Molecule: 40s ribosomal protein s16;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
53 c3fkhB_
not modelled
9.1
17
PDB header: oxidoreductaseChain: B: PDB Molecule: putative pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution
54 c4a17Q_
not modelled
8.9
15
PDB header: ribosomeChain: Q: PDB Molecule: rpl17;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
55 c1vw4O_
not modelled
8.9
17
PDB header: ribosomeChain: O: PDB Molecule: 54s ribosomal protein l22, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
56 d2zjrp1
not modelled
8.9
11
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
57 d2vqei1
not modelled
8.7
19
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Translational machinery components
58 c2ph7B_
not modelled
8.5
42
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein af_2093;
PDBTitle: crystal structure of af2093 from archaeoglobus fulgidus
59 c5xyiQ_
not modelled
8.4
23
PDB header: ribosomeChain: Q: PDB Molecule: 40s ribosomal protein s16, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
60 c2odkD_
not modelled
8.3
14
PDB header: structural genomics, unknown functionChain: D: PDB Molecule: hypothetical protein;
PDBTitle: putative prevent-host-death protein from nitrosomonas europaea
61 c1kyqC_
not modelled
8.1
4
PDB header: oxidoreductase, lyaseChain: C: PDB Molecule: siroheme biosynthesis protein met8;
PDBTitle: met8p: a bifunctional nad-dependent dehydrogenase and2 ferrochelatase involved in siroheme synthesis.
62 d2gy9i1
not modelled
8.1
23
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Translational machinery components
63 c5oevD_
not modelled
8.1
19
PDB header: transferaseChain: D: PDB Molecule: glutathione synthetase-like effector 22 (gpa-gss22-apo);
PDBTitle: the structure of a glutathione synthetase like-effector (gss22) from2 globodera pallida in apoform.
64 c3zf7R_
not modelled
8.0
8
PDB header: ribosomeChain: R: PDB Molecule: 60s ribosomal protein l17, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
65 c5o5jI_
not modelled
7.8
31
PDB header: ribosomeChain: I: PDB Molecule: 30s ribosomal protein s9;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
66 c1u8xX_
not modelled
7.7
15
PDB header: hydrolaseChain: X: PDB Molecule: maltose-6'-phosphate glucosidase;
PDBTitle: crystal structure of glva from bacillus subtilis, a metal-requiring,2 nad-dependent 6-phospho-alpha-glucosidase
67 c4ce4W_
not modelled
7.7
28
PDB header: ribosomeChain: W: PDB Molecule: mrpl22;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
68 c5onkA_
not modelled
7.7
24
PDB header: hydrolaseChain: A: PDB Molecule: yndl;
PDBTitle: native yndl
69 c2xzmI_
not modelled
7.6
19
PDB header: ribosomeChain: I: PDB Molecule: rps16e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
70 d1j0ha2
not modelled
7.6
21
Fold: Glycosyl hydrolase domainSuperfamily: Glycosyl hydrolase domainFamily: alpha-Amylases, C-terminal beta-sheet domain
71 c3nqyA_
not modelled
7.6
50
PDB header: hydrolaseChain: A: PDB Molecule: secreted metalloprotease mcp02;
PDBTitle: crystal structure of the autoprocessed complex of vibriolysin mcp-022 with a single point mutation e346a
72 d2a7sa2
not modelled
7.5
21
Fold: ClpP/crotonaseSuperfamily: ClpP/crotonaseFamily: Biotin dependent carboxylase carboxyltransferase domain
73 c3bbnI_
not modelled
7.5
35
PDB header: ribosomeChain: I: PDB Molecule: ribosomal protein s9;
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
74 c3zeyK_
not modelled
7.4
23
PDB header: ribosomeChain: K: PDB Molecule: 40s ribosomal protein s16, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
75 c5o60T_
not modelled
7.4
11
PDB header: ribosomeChain: T: PDB Molecule: 50s ribosomal protein l22;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
76 d1lr0a_
not modelled
7.3
16
Fold: TolA/TonB C-terminal domainSuperfamily: TolA/TonB C-terminal domainFamily: TolA
77 d2gycq1
not modelled
7.3
17
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
78 c3j21S_
not modelled
7.2
15
PDB header: ribosomeChain: S: PDB Molecule: 50s ribosomal protein l22p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
79 c2zkrr_
not modelled
7.1
8
PDB header: ribosomal protein/rnaChain: R: PDB Molecule: rna expansion segment es39 part i;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
80 c2pfiA_
not modelled
7.1
13
PDB header: transport proteinChain: A: PDB Molecule: chloride channel protein clc-ka;
PDBTitle: crystal structure of the cytoplasmic domain of the human2 chloride channel clc-ka
81 c4f8bE_
not modelled
7.0
20
PDB header: oxidoreductaseChain: E: PDB Molecule: nadph-dependent 7-cyano-7-deazaguanine reductase;
PDBTitle: crystal structure of the covalent thioimide intermediate of unimodular2 nitrile reductase quef
82 c3j20K_
not modelled
7.0
35
PDB header: ribosomeChain: K: PDB Molecule: 30s ribosomal protein s9p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
83 c3fwrB_
not modelled
6.9
12
PDB header: transcriptionChain: B: PDB Molecule: yqzb protein;
PDBTitle: crystal structure of the cbs domains from the bacillus subtilis ccpn2 repressor complexed with adp
84 d2odka1
not modelled
6.9
16
Fold: YefM-likeSuperfamily: YefM-likeFamily: YefM-like
85 d2fsra1
not modelled
6.9
21
Fold: Acyl-CoA N-acyltransferases (Nat)Superfamily: Acyl-CoA N-acyltransferases (Nat)Family: N-acetyl transferase, NAT
86 c2a7yA_
not modelled
6.8
31
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein rv2302/mt2359;
PDBTitle: solution structure of the conserved hypothetical protein2 rv2302 from the bacterium mycobacterium tuberculosis
87 d2a7ya1
not modelled
6.8
31
Fold: SH3-like barrelSuperfamily: Cell growth inhibitor/plasmid maintenance toxic componentFamily: Rv2302-like
88 c2nvgA_
not modelled
6.7
19
PDB header: oxidoreductaseChain: A: PDB Molecule: ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: soluble domain of rieske iron sulfur protein.
89 c4pr3A_
not modelled
6.7
26
PDB header: hydrolaseChain: A: PDB Molecule: 5'-methylthioadenosine nucleosidase / s-
PDBTitle: crystal structure of brucella melitensis 5'-methylthioadenosine/s-2 adenosylhomocysteine nucleosidase
90 c2m3vA_
not modelled
6.7
11
PDB header: hydrolaseChain: A: PDB Molecule: putative uncharacterized protein;
PDBTitle: solution structure of tyrosine phosphatase related to biofilm2 formation a (tpba) from pseudomonas aeruginosa
91 d1i4ja_
not modelled
6.6
11
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
92 c5fifD_
not modelled
6.5
24
PDB header: ligaseChain: D: PDB Molecule: carboxylase;
PDBTitle: carboxyltransferase domain of a single-chain bacterial carboxylase
93 d1vqor1
not modelled
6.5
23
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
94 c1on3E_
not modelled
6.5
24
PDB header: transferaseChain: E: PDB Molecule: methylmalonyl-coa carboxyltransferase 12s
PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound)
95 c4chfB_
not modelled
6.4
44
PDB header: viral proteinChain: B: PDB Molecule: polymerase basic protein 2;
PDBTitle: crystal structure of the putative cap-binding domain of the2 pb2 subunit of thogoto virus polymerase (form 2)
96 c2a7sD_
not modelled
6.4
22
PDB header: ligaseChain: D: PDB Molecule: probable propionyl-coa carboxylase beta chain 5;
PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis
97 c3j3wS_
not modelled
6.2
11
PDB header: ribosomeChain: S: PDB Molecule: 50s ribosomal protein l22;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 ii-a)
98 c5kc1H_
not modelled
6.2
31
PDB header: endocytosisChain: H: PDB Molecule: autophagy-related protein 38;
PDBTitle: structure of the c-terminal dimerization domain of atg38
99 c3ts3D_
not modelled
6.0
23
PDB header: viral proteinChain: D: PDB Molecule: capsid polyprotein;
PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution