Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0097_(-)_106731_107600
DateTue Jul 23 14:50:13 BST 2019
Unique Job IDf2fcba00809b7601
SequenceMTLKVKGEGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.914 Y:55.393 Z:47.335
Model (left) based on template c6dchA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:scoe protein;
PDBTitle: structure of isonitrile biosynthesis enzyme scoe
Confidence and coverage
Confidence:100.0% Coverage: 98%
282 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6dchA_



100.0 45
PDB header:oxidoreductase
Chain: A: PDB Molecule:scoe protein;
PDBTitle: structure of isonitrile biosynthesis enzyme scoe
2c3pvjB_



100.0 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440
3d1otja_



100.0 22
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:TauD/TfdA-like
4c5hsxB_



100.0 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of a putative alpha-ketoglutarate-dependent taurine2 dioxygenase from burkholderia xenovorans
5c6d1oD_



100.0 23
PDB header:oxidoreductase
Chain: D: PDB Molecule:(r)-phenoxypropionate/alpha-ketoglutarate-dioxygenase;
PDBTitle: ft_5 dioxygenase apoenzyme
6c5vn6B_



100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:taurine dioxygenase;
PDBTitle: crystal structure of taurine dioxygenase from burkholderia ambifaria
7c4y0eB_



100.0 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative dioxygenase;
PDBTitle: x-ray crystal structure of a putative dioxygenase from mycobacterium2 abscessus
8c5bkeF_



100.0 21
PDB header:oxidoreductase
Chain: F: PDB Molecule:alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate
PDBTitle: crystal structure of aad-2 in complex with mn(ii) and n-oxalylglycine
9c3r1jB_



100.0 26
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form
10c5j92B_



100.0 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative alpha kg dependent 2,4-d dioxygenase;
PDBTitle: crystal structure of a putative alpha-ketoglutarate dependent 2,4-d2 dioxygenase from burkholderia xenovorans
11d1oiha_



100.0 20
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:TauD/TfdA-like
12c4j5iH_



100.0 20
PDB header:oxidoreductase
Chain: H: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of an alpha-ketoglutarate-dependent taurine2 dioxygenase from mycobacterium smegmatis
13c3eatX_



100.0 18
PDB header:oxidoreductase
Chain: X: PDB Molecule:pyoverdine biosynthesis protein pvcb;
PDBTitle: crystal structure of the pvcb (pa2255) protein from2 pseudomonas aeruginosa
14d1nx4a_



100.0 17
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:gamma-Butyrobetaine hydroxylase
15d1y0za_



100.0 13
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:gamma-Butyrobetaine hydroxylase
16c3ms5A_



100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase;
PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1)
17c6npcB_



100.0 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:tmpa, 2-trimethylaminoethylphosphonate hydroxylase;
PDBTitle: x-ray crystal structure of tmpa, 2-trimethylaminoethylphosphonate2 hydroxylase, with fe, 2og, and 2-trimethylaminoethylphosphonate
18c6f6jC_



100.0 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:l-lysine 3-hydroxylase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo1 with fe(ii)/succinate/(3s)-3-hydroxy-l-lysine
19d1ds1a_



100.0 15
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Clavaminate synthase
20c2og5A_



100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of asparagine oxygenase (asno)
21d1jr7a_



not modelled 100.0 13
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Gab protein (hypothetical protein YgaT)
22c4ne0A_



not modelled 99.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
23c2wbqA_



not modelled 99.9 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of vioc in complex with (2s,3s)-2 hydroxyarginine
24c6dawA_



not modelled 99.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:non-heme iron hydroxylase;
PDBTitle: x-ray crystal structure of napi l-arginine desaturase bound to fe(ii),2 l-arginine, and acetate
25c4ne0B_



not modelled 99.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
26c5eqnA_



not modelled 99.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:frbj;
PDBTitle: structure of phosphonate hydroxylase
27c6exhA_



not modelled 99.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-lysine 4-hydroxylase;
PDBTitle: crystal structure of the complex fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo5 with fe(ii)/succinate/(4r)-4-hydroxy-l-lysine
28c2opwA_



not modelled 98.1 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:phyhd1 protein;
PDBTitle: crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo)
29c4xaaA_



not modelled 97.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of avio1 from streptomyces viridochromogenes tue57
30c5erlD_



not modelled 97.7 23
PDB header:isomerase
Chain: D: PDB Molecule:snon,snon;
PDBTitle: crystal structure of the epimerase snon in complex with ni2+,2 succinate and nogalamycin ro
31c4xabA_



not modelled 97.7 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:evdo2;
PDBTitle: crystal structure of evdo2 from micromonospora carbonacea var.2 aurantiaca
32c4naoA_



not modelled 97.6 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of eash
33c5m0tA_



not modelled 97.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-ketoglutarate-dependent non-heme iron oxygenase eash;
PDBTitle: alpha-ketoglutarate-dependent non-heme iron oxygenase eash
34c5zm4B_



not modelled 97.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:dioxygenase anda;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase anda with2 preandiloid c
35c5yboA_



not modelled 97.2 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:prha;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha in complex with2 preaustinoid a1
36c2rdsA_



not modelled 97.2 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxypentalenic acid 11-beta hydroxylase; fe(ii)/alpha-
PDBTitle: crystal structure of ptlh with fe/oxalylglycine and ent-1-2 deoxypentalenic acid bound
37c4zonB_



not modelled 97.2 22
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:verruculogen synthase;
PDBTitle: structure of ftmox1 with fumitremorgen b complex
38c5daqA_



not modelled 97.2 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:phytanoyl-coa dioxygenase family protein (afu_orthologue
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase asqj in complex with2 4-methoxycyclopeptin
39c5epaE_



not modelled 96.8 11
PDB header:lyase
Chain: E: PDB Molecule:snok;
PDBTitle: crystal structure of non-heme alpha ketoglutarate dependent2 carbocyclase snok from nogalamycin biosynthesis
40d2a1xa1



not modelled 96.5 11
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:PhyH-like
41c4xbzB_



not modelled 95.7 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:evdo1;
PDBTitle: crystal structure of evdo1 from micromonospora carbonacea var.2 aurantiaca
42c3emrA_



not modelled 94.9 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:ectd;
PDBTitle: crystal structure analysis of the ectoine hydroxylase ectd from2 salibacillus salexigens
43c4xc9B_



not modelled 94.3 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidase/hydroxylase;
PDBTitle: crystal structure of apo hygx from streptomyces hygroscopicus
44c3gjbA_



not modelled 93.3 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cytc3;
PDBTitle: cytc3 with fe(ii) and alpha-ketoglutarate
45c5ncjB_



not modelled 91.3 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:leucine hydroxylase;
PDBTitle: grie in complex with manganese, succinate and (2s,4r)-5-hydroxyleucine
46c3nnlB_



not modelled 90.6 12
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cura;
PDBTitle: halogenase domain from cura module (crystal form iii)
47d2fcta1



not modelled 88.3 18
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:PhyH-like
48c4mhuB_



not modelled 86.6 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:ectoine hydroxylase;
PDBTitle: crystal structure of ectd from s. alaskensis with bound fe
49c1yy3A_



not modelled 80.1 16
PDB header:isomerase
Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase-
PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea)
50c4iw3J_



not modelled 78.2 14
PDB header:metal binding protein/translation
Chain: J: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a pseudomonas putida prolyl-4-hydroxylase (p4h)2 in complex with elongation factor tu (ef-tu)
51d1wdia_



not modelled 75.6 11
Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
52d1vkya_



not modelled 72.7 11
Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
53c6ec3C_



not modelled 68.1 23
PDB header:transferase, oxidoreductase
Chain: C: PDB Molecule:methyltransferase domain-containing protein;
PDBTitle: crystal structure of evdmo1
54c6ax6B_



not modelled 58.1 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:procollagen lysyl hydroxylase and glycosyltransferase;
PDBTitle: the crystal structure of a lysyl hydroxylase from acanthamoeba2 polyphaga mimivirus
55c3rcqA_



not modelled 56.8 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:aspartyl/asparaginyl beta-hydroxylase;
PDBTitle: crystal structure of human aspartate beta-hydroxylase isoform a
56c2g19A_



not modelled 51.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:egl nine homolog 1;
PDBTitle: cellular oxygen sensing: crystal structure of hypoxia-inducible factor2 prolyl hydroxylase (phd2)
57c3pl0B_



not modelled 44.7 22
PDB header:biosynthetic protein
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a bsma homolog (mpe_a2762) from methylobium2 petroleophilum pm1 at 1.91 a resolution
58c3ouiA_



not modelled 44.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:egl nine homolog 1;
PDBTitle: phd2-r717 with 40787422
59d1e5ra_



not modelled 43.2 20
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Type II Proline 3-hydroxylase (proline oxidase)
60c3dkqB_



not modelled 41.8 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634;
PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution
61c5jqyA_



not modelled 37.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:aspartyl/asparaginyl beta-hydroxylase;
PDBTitle: aspartyl/asparaginyl beta-hydroxylase (asph)oxygenase and tpr domains2 in complex with manganese, n-oxalylglycine and factor x substrate3 peptide fragment(39mer-4ser)
62c3itqB_



not modelled 35.5 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:prolyl 4-hydroxylase, alpha subunit domain protein;
PDBTitle: crystal structure of a prolyl 4-hydroxylase from bacillus anthracis
63d2evra2



not modelled 35.3 18
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:NlpC/P60
64c4p7xA_



not modelled 32.3 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-proline cis-4-hydroxylase;
PDBTitle: l-pipecolic acid-bound l-proline cis-4-hydroxylase
65c6f0wA_



not modelled 32.0 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:hif prolyl hydroxylase;
PDBTitle: prolyl hydroxylase in complex with hypoxia inducible factor oxygen2 degradation domain peptide fragment from trichoplax adhaerens
66d1w9ya1



not modelled 28.8 10
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
67c4xaeB_



not modelled 27.1 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:feruloyl coa ortho-hydroxylase 1;
PDBTitle: structure of feruloyl-coa 6-hydroxylase (f6h) from arabidopsis2 thaliana
68c2xivA_



not modelled 26.3 25
PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis
69d16pka_



not modelled 25.6 27
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
70c3gt2A_



not modelled 25.1 19
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the p60 domain from m. avium paratuberculosis2 antigen map1272c
71c3on7C_



not modelled 24.3 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family;
PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution
72c3npfB_



not modelled 22.8 18
PDB header:hydrolase
Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi;
PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
73c3pbiA_



not modelled 21.2 25
PDB header:hydrolase
Chain: A: PDB Molecule:invasion protein;
PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
74c1zmrA_



not modelled 20.6 14
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of the e. coli phosphoglycerate kinase
75c5c5tB_



not modelled 20.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:prolyl 4-hydroxylase;
PDBTitle: the crystal structure of viral collagen prolyl hydroxylase vcph from2 paramecium bursaria chlorella virus-1 - 2og complex
76c2c5sA_



not modelled 20.1 23
PDB header:rna-binding protein
Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii;
PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain
77d1hdia_



not modelled 20.1 27
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
78d1phpa_



not modelled 19.9 27
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
79c6b8cA_



not modelled 19.1 27
PDB header:hydrolase
Chain: A: PDB Molecule:nlp/p60;
PDBTitle: crystal structure of nlpc/p60 domain of peptidoglycan hydrolase saga
80d1ftra2



not modelled 19.0 10
Fold:Ferredoxin-like
Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase
Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase
81d1gp6a_



not modelled 18.7 6
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
82d1ltka_



not modelled 18.5 20
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
83c6biqA_



not modelled 18.2 36
PDB header:hydrolase
Chain: A: PDB Molecule:clan ca, family c40, nlpc/p60 superfamily cysteine
PDBTitle: structure of nlpc2 from trichomonas vaginalis
84d1vpea_



not modelled 18.2 20
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
85d1odma_



not modelled 18.1 3
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
86c3ghfA_



not modelled 17.9 14
PDB header:cell cycle
Chain: A: PDB Molecule:septum site-determining protein minc;
PDBTitle: crystal structure of the septum site-determining protein minc from2 salmonella typhimurium
87c3zlbA_



not modelled 17.7 21
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from streptococcus2 pneumoniae
88c1vbkA_



not modelled 17.4 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1313;
PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3
89d1fw8a_



not modelled 16.7 29
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
90d1f1ja_



not modelled 16.3 11
Fold:Caspase-like
Superfamily:Caspase-like
Family:Caspase catalytic domain
91c2cunA_



not modelled 15.8 15
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from pyrococcus2 horikoshii ot3
92d1v6sa_



not modelled 15.8 21
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
93d1m5sa2



not modelled 15.4 13
Fold:Ferredoxin-like
Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase
Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase
94c2fg0B_



not modelled 15.0 14
PDB header:hydrolase
Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion-
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
95c4dg5A_



not modelled 14.7 29
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of staphylococcal phosphoglycerate kinase
96c3q3vA_



not modelled 14.6 27
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni.
97d1un7a2



not modelled 14.0 15
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
98c4hpeA_



not modelled 13.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:putative cell wall hydrolase tn916-like,ctn1-orf17;
PDBTitle: crystal structure of a putative cell wall hydrolase (cd630_03720) from2 clostridium difficile 630 at 2.38 a resolution
99c3bu7A_



not modelled 13.8 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:gentisate 1,2-dioxygenase;
PDBTitle: crystal structure and biochemical characterization of gdosp, a2 gentisate 1,2-dioxygenase from silicibacter pomeroyi

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