Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0098_(-)_107597_108148
DateTue Jul 23 14:50:13 BST 2019
Unique Job IDfc9d1d8a9d4cd4bd
SequenceMSHTDLTPCT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.548 Y:48.492 Z:39.186
Model (left) based on template c2pfcA_
Top template information
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv0098/mt0107;
PDBTitle: structure of mycobacterium tuberculosis rv0098
Confidence and coverage
Confidence:100.0% Coverage: 87%
160 residues ( 87% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2pfcA_



100.0 100
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv0098/mt0107;
PDBTitle: structure of mycobacterium tuberculosis rv0098
2c5wsxA_



100.0 36
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of sav606
3c4k00A_



46.2 12
PDB header:hydrolase
Chain: A: PDB Molecule:1,4-dihydroxy-2-naphthoyl-coa hydrolase;
PDBTitle: crystal structure of slr0204, a 1,4-dihydroxy-2-naphthoyl-coa2 thioesterase from synechocystis
4d2hlja1



43.7 17
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:4HBT-like
5c4rmmA_



35.3 24
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the q7nvp2_chrvo protein from chromobacterium2 violaceum. northeast structural genomics consortium target cvr191
6c6b48K_



29.3 28
PDB header:immune system / rna
Chain: K: PDB Molecule:anti-crispr protein acrf10;
PDBTitle: cryo-em structure of type i-f crispr crrna-guided csy surveillance2 complex with bound anti-crispr protein acrf10
7c2lm0A_



25.4 53
PDB header:nuclear protein
Chain: A: PDB Molecule:af4/fmr2 family member 1/protein af-9 chimera;
PDBTitle: solution structure of the af4-af9 complex
8c3ck1B_



24.5 10
PDB header:hydrolase
Chain: B: PDB Molecule:putative thioesterase;
PDBTitle: crystal structure of a putative thioesterase (reut_a2179) from2 ralstonia eutropha jmp134 at 1.74 a resolution
9c5xk9F_



23.2 8
PDB header:transferase
Chain: F: PDB Molecule:undecaprenyl diphosphate synthase;
PDBTitle: crystal structure of isosesquilavandulyl diphosphate synthase from2 streptomyces sp. strain cnh-189 in complex with gspp and dmapp
10c5cajB_



22.5 16
PDB header:unknown function
Chain: B: PDB Molecule:upf0246 protein yaaa;
PDBTitle: crystal structure of e. coli yaaa, a member of the duf328/upf02462 family
11c3kspA_



20.1 5
PDB header:unknown function
Chain: A: PDB Molecule:calcium/calmodulin-dependent kinase ii association domain;
PDBTitle: crystal structure of a putative ca/calmodulin-dependent kinase ii2 association domain (exig_1688) from exiguobacterium sibiricum 255-153 at 2.59 a resolution
12c2egiE_



19.4 17
PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:hypothetical protein aq_1494;
PDBTitle: crystal structure of a hypothetical protein(aq1494) from aquifex2 aeolicus
13c3nv4A_



19.2 20
PDB header:sugar binding protein
Chain: A: PDB Molecule:galectin 9 short isoform variant;
PDBTitle: crystal structure of human galectin-9 c-terminal crd in complex with2 sialyllactose
14d1ntxa_



19.1 25
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
15d1iq9a_



18.2 38
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
16d1lcla_



17.6 15
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Galectin (animal S-lectin)
17c2w3xE_



16.9 18
PDB header:hydrolase
Chain: E: PDB Molecule:cale7;
PDBTitle: crystal structure of a bifunctional hotdog fold2 thioesterase in enediyne biosynthesis, cale7
18d1dfxa2



16.8 56
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Desulforedoxin
19d2dmda1



16.7 55
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
20c1w25B_



15.9 15
PDB header:signaling protein
Chain: B: PDB Molecule:stalked-cell differentiation controlling protein;
PDBTitle: response regulator pled in complex with c-digmp
21d1fsoa_



not modelled 15.8 16
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
22d3ebxa_



not modelled 15.2 38
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
23d1ut9a2



not modelled 14.9 33
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
24c4fr9A_



not modelled 14.9 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a blip-like protein (bf1215) from bacteroides2 fragilis nctc 9343 at 1.20 a resolution
25c3r87A_



not modelled 14.9 15
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of orf6 protein from photobacterium profundum
26d1rhoa_



not modelled 14.8 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
27d1vpya_



not modelled 14.5 38
Fold:TIM beta/alpha-barrel
Superfamily:TM1631-like
Family:TM1631-like
28d1z54a1



not modelled 14.2 11
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:4HBT-like
29c4g92C_



not modelled 13.9 25
PDB header:transcription/dna
Chain: C: PDB Molecule:hape;
PDBTitle: ccaat-binding complex from aspergillus nidulans with dna
30d1vzia2



not modelled 13.6 44
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Desulforedoxin
31d1vb0a_



not modelled 13.5 38
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
32c2kfvA_



not modelled 13.3 24
PDB header:isomerase
Chain: A: PDB Molecule:fk506-binding protein 3;
PDBTitle: structure of the amino-terminal domain of human fk506-2 binding protein 3 / northeast structural genomics3 consortium target ht99a
33d1v43a2



not modelled 13.1 12
Fold:OB-fold
Superfamily:MOP-like
Family:ABC-transporter additional domain
34d1tfsa_



not modelled 13.0 17
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
35d1v6pa_



not modelled 12.9 38
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
36c2kvfA_



not modelled 12.8 56
PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32;
PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein
37d1s5ua_



not modelled 12.7 13
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:4HBT-like
38d1vpqa_



not modelled 12.7 50
Fold:TIM beta/alpha-barrel
Superfamily:TM1631-like
Family:TM1631-like
39c2kimA_



not modelled 12.4 28
PDB header:transferase
Chain: A: PDB Molecule:o6-methylguanine-dna methyltransferase;
PDBTitle: 1.7-mm microcryoprobe solution nmr structure of an o6-methylguanine2 dna methyltransferase family protein from vibrio parahaemolyticus.3 northeast structural genomics consortium target vpr247.
40c3gx4X_



not modelled 12.4 50
PDB header:dna binding protein/dna
Chain: X: PDB Molecule:alkyltransferase-like protein 1;
PDBTitle: crystal structure analysis of s. pombe atl in complex with dna
41c2vg2C_



not modelled 11.8 15
PDB header:transferase
Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase;
PDBTitle: rv2361 with ipp
42d1g6ma_



not modelled 11.6 50
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
43c3kreA_



not modelled 11.2 18
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: crystal structure of phosphoribosylaminoimidazole-succinocarboxamide2 synthase from ehrlichia chaffeensis at 1.8a resolution
44d1doab_



not modelled 10.9 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
45c3nuaB_



not modelled 10.8 36
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: crystal structure of phosphoribosylaminoimidazole-succinocarboxamide2 synthase from clostridium perfringens
46d1ajwa_



not modelled 10.8 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
47c3gekA_



not modelled 10.8 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative thioesterase yhda;
PDBTitle: crystal structure of putative thioesterase yhda from lactococcus2 lactis. northeast structural genomics consortium target kr113
48d2owna2



not modelled 10.7 12
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:Acyl-ACP thioesterase-like
49c3btpA_



not modelled 10.7 40
PDB header:dna binding protein, chaperone
Chain: A: PDB Molecule:single-strand dna-binding protein;
PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding
50d1hh4e_



not modelled 10.5 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
51d1vh5a_



not modelled 10.4 18
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:PaaI/YdiI-like
52d1qm7a_



not modelled 10.4 17
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
53c2m83A_



not modelled 10.2 33
PDB header:hydrolase
Chain: A: PDB Molecule:protein phosphatase 1 regulatory subunit 3a;
PDBTitle: solution structure of the carbohydrate binding module of the muscle2 glycogen-targeting subunit of protein phosphatase-1
54d1ds6b_



not modelled 10.2 12
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
55c4mjgB_



not modelled 10.1 26
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a duf4853 family protein (actodo_00621) from2 actinomyces odontolyticus atcc 17982 at 2.65 a resolution
56d1sc0a_



not modelled 9.9 13
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:PaaI/YdiI-like
57d1sfea1



not modelled 9.8 42
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Family:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
58d1qnta1



not modelled 9.8 67
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Family:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
59d1ibxb_



not modelled 9.8 39
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:CAD domain
60c1ibxB_



not modelled 9.8 39
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:chimera of igg binding protein g and dna
PDBTitle: nmr structure of dff40 and dff45 n-terminal domain complex
61d2gjva1



not modelled 9.7 25
Fold:Phage tail protein-like
Superfamily:Phage tail protein-like
Family:STM4215-like
62c3lmbA_



not modelled 9.6 5
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of the protein olei01261 with unknown function2 from chlorobaculum tepidum tls
63c2pzhC_



not modelled 9.5 16
PDB header:hydrolase
Chain: C: PDB Molecule:hypothetical protein hp_0496;
PDBTitle: ybgc thioesterase (hp0496) from helicobacter pylori
64d1mgta1



not modelled 9.5 50
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Family:Methylated DNA-protein cysteine methyltransferase, C-terminal domain
65d1njka_



not modelled 9.5 13
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:4HBT-like
66c1zx3A_



not modelled 9.4 57
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ne0241;
PDBTitle: structure of ne0241 protein of unknown function from nitrosomonas2 europaea
67d1zx3a1



not modelled 9.4 57
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:NE0241-like
68c1geaA_



not modelled 9.4 31
PDB header:neuropeptide
Chain: A: PDB Molecule:pituitary adenylate cyclase activating
PDBTitle: receptor-bound conformation of pacap21
69d1lqva_



not modelled 9.3 18
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
70c3ulxA_



not modelled 9.2 31
PDB header:dna binding protein
Chain: A: PDB Molecule:stress-induced transcription factor nac1;
PDBTitle: crystal structural of the conserved domain of rice stress-responsive2 nac1
71c2z02A_



not modelled 9.1 18
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide
PDBTitle: crystal structure of2 phosphoribosylaminoimidazolesuccinocarboxamide synthase3 wit atp from methanocaldococcus jannaschii
72c2gqsA_



not modelled 8.9 18
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: saicar synthetase complexed with cair-mg2+ and adp
73c3r9rA_



not modelled 8.7 14
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: structure of a phosphoribosylaminoimidazole-succinocarboxamide2 synthase from mycobacterium abscessus atcc 19977 / dsm 44196
74c2eefA_



not modelled 8.4 28
PDB header:sugar binding protein
Chain: A: PDB Molecule:protein phosphatase 1, regulatory (inhibitor)
PDBTitle: solution structure of the cbm_21 domain from human protein2 phosphatase 1, regulatory (inhibitor) subunit 3b
75d1kmta_



not modelled 8.3 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
76c3e8pA_



not modelled 8.2 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the protein q8e9m7 from shewanella oneidensis2 related to thioesterase superfamily. northeast structural genomics3 consortium target sor246.
77c3dadA_



not modelled 8.2 23
PDB header:signaling protein
Chain: A: PDB Molecule:fh1/fh2 domain-containing protein 1;
PDBTitle: crystal structure of the n-terminal regulatory domains of2 the formin fhod1
78c5cfmA_



not modelled 8.1 11
PDB header:immune system
Chain: A: PDB Molecule:stimulator of interferon genes;
PDBTitle: crystal structure of anemone sting (nematostella vectensis) in complex2 with 3', 3' cgamp, c[g(3', 5')pa(3', 5')p]
79d1rxja_



not modelled 8.0 21
Fold:Streptavidin-like
Superfamily:Avidin/streptavidin
Family:Avidin/streptavidin
80c2gjvF_



not modelled 7.8 24
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative cytoplasmic protein;
PDBTitle: crystal structure of a protein of unknown function from salmonella2 typhimurium
81d1x3aa1



not modelled 7.8 0
Fold:BSD domain-like
Superfamily:BSD domain-like
Family:BSD domain
82c4i4jE_



not modelled 7.8 17
PDB header:hydrolase
Chain: E: PDB Molecule:acp-polyene thioesterase;
PDBTitle: the structure of sgce10, the acp-polyene thioesterase involved in c-2 1027 biosynthesis
83c3l7mC_



not modelled 7.7 42
PDB header:structural protein
Chain: C: PDB Molecule:teichoic acid biosynthesis protein f;
PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a
84c5ibxB_



not modelled 7.7 13
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: 1.65 angstrom crystal structure of triosephosphate isomerase (tim)2 from streptococcus pneumoniae
85c2djmA_



not modelled 7.7 33
PDB header:sugar binding protein
Chain: A: PDB Molecule:glucoamylase a;
PDBTitle: solution structure of n-terminal starch-binding domain of2 glucoamylase from rhizopus oryzae
86c4f5yA_



not modelled 7.6 0
PDB header:immune system
Chain: A: PDB Molecule:transmembrane protein 173;
PDBTitle: crystal structure of human sting ctd complex with c-di-gmp
87d2o5ua1



not modelled 7.4 20
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:4HBT-like
88d2c9aa1



not modelled 7.2 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
89d1ttja_



not modelled 7.1 17
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
90c2mphA_



not modelled 7.0 26
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp3;
PDBTitle: solution structure of human fk506 binding protein 25
91c4ef4B_



not modelled 6.8 0
PDB header:immune system
Chain: B: PDB Molecule:transmembrane protein 173;
PDBTitle: crystal structure of sting ctd complex with c-di-gmp
92c1jp3A_



not modelled 6.8 17
PDB header:transferase
Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase
93c2xglB_



not modelled 6.7 19
PDB header:antibiotic
Chain: B: PDB Molecule:colicin-m immunity protein;
PDBTitle: the x-ray structure of the escherichia coli colicin m immunity protein2 demonstrates the presence of a disulphide bridge, which is3 functionally essential
94c2xznB_



not modelled 6.6 22
PDB header:ribosome
Chain: B: PDB Molecule:rps0e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
95d2cnqa1



not modelled 6.3 29
Fold:SAICAR synthase-like
Superfamily:SAICAR synthase-like
Family:SAICAR synthase
96c1unhD_



not modelled 6.2 14
PDB header:cell cycle
Chain: D: PDB Molecule:cyclin-dependent kinase 5 activator 1;
PDBTitle: structural mechanism for the inhibition of cdk5-p25 by2 roscovitine, aloisine and indirubin.
97d1unld_



not modelled 6.2 14
Fold:Cyclin-like
Superfamily:Cyclin-like
Family:Cyclin
98c3ugsB_



not modelled 6.1 21
PDB header:transferase
Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni
99d1vh9a_



not modelled 6.1 18
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:PaaI/YdiI-like

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