Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0137c_(msrA)_164710_165258
DateTue Jul 23 14:50:18 BST 2019
Unique Job ID80bcbbdb1eae7785
SequenceMTSNQKAILA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.525 Y:39.771 Z:46.470
Model (left) based on template c1nwaA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: structure of mycobacterium tuberculosis methionine2 sulfoxide reductase a in complex with protein-bound3 methionine
Confidence and coverage
Confidence:100.0% Coverage: 91%
166 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1nwaA_



100.0 100
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: structure of mycobacterium tuberculosis methionine2 sulfoxide reductase a in complex with protein-bound3 methionine
2d1nwaa_



100.0 100
Fold:Ferredoxin-like
Superfamily:Peptide methionine sulfoxide reductase
Family:Peptide methionine sulfoxide reductase
3c3e0mB_



100.0 36
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb
PDBTitle: crystal structure of fusion protein of msra and msrb
4c3bqhA_



100.0 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb;
PDBTitle: structure of the central domain (msra) of neisseria meningitidis pilb2 (oxidized form)
5c2j89A_



100.0 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine sulfoxide reductase a;
PDBTitle: functional and structural aspects of poplar cytosolic and2 plastidial type a methionine sulfoxide reductases
6c1fvaA_



100.0 39
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: crystal structure of bovine methionine sulfoxide reductase
7c4d7lB_



100.0 41
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: methionine sulfoxide reductase a of corynebacterium diphtheriae
8c3pilA_



100.0 37
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: crystal structure of mxr1 from saccharomyces cerevisiae in reduced2 form
9d1fvga_



100.0 39
Fold:Ferredoxin-like
Superfamily:Peptide methionine sulfoxide reductase
Family:Peptide methionine sulfoxide reductase
10d1ff3a_



100.0 43
Fold:Ferredoxin-like
Superfamily:Peptide methionine sulfoxide reductase
Family:Peptide methionine sulfoxide reductase
11c5fa9B_



100.0 36
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: bifunctional methionine sulfoxide reductase ab (msrab) from treponema2 denticola
12d1ff3c_



100.0 43
Fold:Ferredoxin-like
Superfamily:Peptide methionine sulfoxide reductase
Family:Peptide methionine sulfoxide reductase
13c4lwlA_



100.0 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: crystal structure of methionine sulfoxide reductase u16c/e55a from2 clostridium oremlandii
14d1p6ta1



96.8 23
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
15d1kvja_



96.4 24
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
16c2ofgX_



96.4 22
PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
17d1cpza_



96.2 15
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
18d1q8la_



96.2 22
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
19d1afia_



96.0 18
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
20c2lqbA_



95.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: metal binding repeat 2 of the wilson disease protein (atp7b)
21c1yjrA_



not modelled 95.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the sixth soluble2 domain a69p mutant of menkes protein
22c2n7yA_



not modelled 95.8 20
PDB header:metal binding protein
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: nmr structure of metal-binding domain 1 of atp7b
23c2kkhA_



not modelled 95.8 13
PDB header:metal transport
Chain: A: PDB Molecule:putative heavy metal transporter;
PDBTitle: structure of the zinc binding domain of the atpase hma4
24c6ff2A_



not modelled 95.8 26
PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone copz;
PDBTitle: copz metallochaperone
25d1p6ta2



not modelled 95.7 21
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
26d1s6ua_



not modelled 95.6 22
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
27c2ldiA_



not modelled 95.5 21
PDB header:hydrolase
Chain: A: PDB Molecule:zinc-transporting atpase;
PDBTitle: nmr solution structure of ziaan sub mutant
28d2aw0a_



not modelled 95.5 32
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
29c4u9rA_



not modelled 95.3 18
PDB header:hydrolase
Chain: A: PDB Molecule:czcp cation efflux p1-atpase;
PDBTitle: structure of the n-terminal extension from cupriavidus metallidurans2 czcp
30c2ofhX_



not modelled 95.3 19
PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
31d2qifa1



not modelled 95.2 20
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
32c2rmlA_



not modelled 95.2 22
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting p-type atpase copa;
PDBTitle: solution structure of the n-terminal soluble domains of2 bacillus subtilis copa
33c2ga7A_



not modelled 95.1 11
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein)
34c2ropA_



not modelled 95.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of domains 3 and 4 of human atp7b
35c2l3mA_



not modelled 94.9 22
PDB header:metal binding protein
Chain: A: PDB Molecule:copper-ion-binding protein;
PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames
36c2ew9A_



not modelled 94.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of apowln5-6
37c2kt2A_



not modelled 94.8 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:mercuric reductase;
PDBTitle: structure of nmera, the n-terminal hma domain of tn501 mercuric2 reductase
38d1osda_



not modelled 94.7 24
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
39d2ggpb1



not modelled 94.4 18
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
40c3j09A_



not modelled 94.4 26
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
41c3dxsX_



not modelled 94.2 20
PDB header:hydrolase
Chain: X: PDB Molecule:copper-transporting atpase ran1;
PDBTitle: crystal structure of a copper binding domain from hma7, a p-2 type atpase
42c1y3kA_



not modelled 94.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the fifth domain of2 menkes protein
43d1mwza_



not modelled 91.7 20
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
44c1yg0A_



not modelled 91.6 18
PDB header:metal transport
Chain: A: PDB Molecule:cop associated protein;
PDBTitle: solution structure of apo-copp from helicobacter pylori
45c2aj1A_



not modelled 90.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:probable cadmium-transporting atpase;
PDBTitle: solution structure of apocada
46c2gcfA_



not modelled 90.5 23
PDB header:hydrolase
Chain: A: PDB Molecule:cation-transporting atpase pacs;
PDBTitle: solution structure of the n-terminal domain of the coppper(i) atpase2 pacs in its apo form
47d2phcb2



not modelled 90.2 21
Fold:DCoH-like
Superfamily:PH0987 N-terminal domain-like
Family:PH0987 N-terminal domain-like
48c4y2iA_



not modelled 82.6 19
PDB header:metal transport
Chain: A: PDB Molecule:putative metal-binding transport protein;
PDBTitle: gold ion bound to golb
49c5i8iD_



not modelled 81.7 21
PDB header:hydrolase
Chain: D: PDB Molecule:urea amidolyase;
PDBTitle: crystal structure of the k. lactis urea amidolyase
50c2rogA_



not modelled 78.4 13
PDB header:metal binding protein
Chain: A: PDB Molecule:heavy metal binding protein;
PDBTitle: solution structure of thermus thermophilus hb8 ttha17182 protein in living e. coli cells
51c2k2pA_



not modelled 78.2 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1203;
PDBTitle: solution nmr structure of protein atu1203 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att10, ontario center for structural proteomics target atc1183
52c2phcB_



not modelled 77.4 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein ph0987;
PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii
53c2kwaA_



not modelled 75.4 15
PDB header:transferase inhibitor
Chain: A: PDB Molecule:kinase a inhibitor;
PDBTitle: 1h, 13c and 15n backbone and side chain resonance assignments of the2 n-terminal domain of the histidine kinase inhibitor kipi from3 bacillus subtilis
54d1qupa2



not modelled 67.7 15
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
55c3oepA_



not modelled 67.3 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha0988;
PDBTitle: crystal structure of ttha0988 in space group p43212
56c5dudB_



not modelled 63.0 28
PDB header:unknown function
Chain: B: PDB Molecule:ybgj;
PDBTitle: crystal structure of e. coli ybgjk
57d1vsra_



not modelled 61.5 31
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
58c2f40A_



not modelled 57.8 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf1455;
PDBTitle: structure of a novel protein from backbone-centered nmr data and nmr-2 assisted structure prediction
59d1sb6a_



not modelled 50.8 16
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
60c2kyzA_



not modelled 49.6 14
PDB header:metal binding protein
Chain: A: PDB Molecule:heavy metal binding protein;
PDBTitle: nmr structure of heavy metal binding protein tm0320 from thermotoga2 maritima
61c1jk9D_



not modelled 40.3 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: heterodimer between h48f-ysod1 and yccs
62c3mmlD_



not modelled 39.4 15
PDB header:hydrolase
Chain: D: PDB Molecule:allophanate hydrolase subunit 1;
PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436
63c1ansA_



not modelled 38.4 83
PDB header:toxin
Chain: A: PDB Molecule:neurotoxin iii;
PDBTitle: three-dimensional structure in solution of neurotoxin iii from the sea2 anemone anemonia sulcata
64c3va7A_



not modelled 37.7 11
PDB header:ligase
Chain: A: PDB Molecule:klla0e08119p;
PDBTitle: crystal structure of the kluyveromyces lactis urea carboxylase
65c6nmiC_



not modelled 36.3 17
PDB header:transcription
Chain: C: PDB Molecule:general transcription factor iih subunit 1, p62;
PDBTitle: cryo-em structure of the human tfiih core complex
66c1qupA_



not modelled 32.8 15
PDB header:chaperone
Chain: A: PDB Molecule:superoxide dismutase 1 copper chaperone;
PDBTitle: crystal structure of the copper chaperone for superoxide dismutase
67d1cw0a_



not modelled 30.9 42
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
68c6o9l1_



not modelled 29.1 18
PDB header:transcription/dna
Chain: 1: PDB Molecule:general transcription factor iih subunit 1;
PDBTitle: human holo-pic in the closed state
69d2nn6b2



not modelled 25.6 11
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
70d2gz1a2



not modelled 23.8 22
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
71c2crlA_



not modelled 23.8 13
PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase
72d2je6b2



not modelled 23.0 17
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
73c3fryB_



not modelled 22.9 12
PDB header:hydrolase
Chain: B: PDB Molecule:probable copper-exporting p-type atpase a;
PDBTitle: crystal structure of the copa c-terminal metal binding domain
74c6fp6X_



not modelled 22.3 10
PDB header:metal binding protein
Chain: X: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: complex of human cu,zn sod1 with the human copper chaperone for sod12 in a compact conformation
75d1cc8a_



not modelled 20.9 21
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
76c3md1B_



not modelled 20.2 12
PDB header:rna binding protein
Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein
PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1)
77d2br2b2



not modelled 19.9 17
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
78c4cwcC_



not modelled 18.1 21
PDB header:isomerase
Chain: C: PDB Molecule:replication initiation protein, replication initiation
PDBTitle: structure of rolling circle replication initiator protein (2 repde) from staphylococcus aureus
79d1leha2



not modelled 16.1 20
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Aminoacid dehydrogenases
80d1fxla1



not modelled 16.0 12
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
81d1uala_



not modelled 15.7 25
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:tRNA(m1G37)-methyltransferase TrmD
82c5gmkS_



not modelled 15.4 30
PDB header:rna binding protein/rna
Chain: S: PDB Molecule:pre-mrna-splicing factor cwc15;
PDBTitle: cryo-em structure of the catalytic step i spliceosome (c complex) at2 3.4 angstrom resolution
83c4k6lG_



not modelled 15.3 12
PDB header:toxin
Chain: G: PDB Molecule:putative pertussis-like toxin subunit;
PDBTitle: structure of typhoid toxin
84c6gq9A_



not modelled 15.2 33
PDB header:allergen
Chain: A: PDB Molecule:major allergen cor a 1.0401;
PDBTitle: solution structure of the hazel allergen cor a 1.0401
85c5ensA_



not modelled 14.7 24
PDB header:transport protein
Chain: A: PDB Molecule:multidrug efflux pump subunit acrb,multidrug efflux pump
PDBTitle: rhodamine bound structure of bacterial efflux pump.
86c4z9cA_



not modelled 14.4 16
PDB header:transferase
Chain: A: PDB Molecule:pertussis toxin-like subunit arta;
PDBTitle: ecpltab oxidized
87d2cq3a1



not modelled 13.9 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
88d2nn6f2



not modelled 13.1 17
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
89d2cqpa1



not modelled 12.6 11
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
90d1u7ka_



not modelled 12.5 37
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
91d1t4ba2



not modelled 12.4 22
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
92d1e3ha5



not modelled 12.4 19
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
93d1fe0a_



not modelled 12.3 33
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
94d1sl8a_



not modelled 12.3 19
Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
95d1pqua2



not modelled 11.6 9
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
96c4f26A_



not modelled 11.1 14
PDB header:translation
Chain: A: PDB Molecule:polyadenylate-binding protein 1;
PDBTitle: crystal structure of the second rrm domain of human pabpc1 a ph 9.0
97c2d9pA_



not modelled 10.9 8
PDB header:rna binding protein
Chain: A: PDB Molecule:polyadenylate-binding protein 3;
PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3
98c6hwwA_



not modelled 10.7 37
PDB header:viral protein
Chain: A: PDB Molecule:putative gag polyprotein;
PDBTitle: immature mlv capsid hexamer structure in intact virus particles
99c2k2bA_



not modelled 10.6 26
PDB header:transport protein
Chain: A: PDB Molecule:degenerin mec-4;
PDBTitle: sparse-constraint solution nmr structure of micelle-2 solublized cytosolic amino terminal domain of c. elegans3 mechanosensory ion channel subunit mec-4. new york4 consortium on membrane protein structure (nycomps) (casp5 target)

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