Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0143c_(-)_168702_170180
DateTue Jul 23 14:50:18 BST 2019
Unique Job ID4e85f9d3a7d2c276
SequenceMAPGDWSVFA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:69.938 Y:54.431 Z:95.410
Model (left) based on template d1otsa_
Top template information
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel
Confidence and coverage
Confidence:100.0% Coverage: 89%
437 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1otsa_



100.0 23
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel
2c2ht2B_



100.0 23
PDB header:membrane protein
Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca;
PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex
3d1kpla_



100.0 25
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel
4c3nd0A_



100.0 23
PDB header:transport protein
Chain: A: PDB Molecule:sll0855 protein;
PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter
5c6coyB_



100.0 19
PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: human clc-1 chloride ion channel, transmembrane domain
6c6qvcB_



100.0 18
PDB header:membrane protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: cryoem structure of the human clc-1 chloride channel, cbs state 1
7c5tr1A_



100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:chloride channel protein;
PDBTitle: cryo-electron microscopy structure of a bovine clc-k chloride channel,2 alternate (class 2) conformation
8c3orgB_



100.0 22
PDB header:transport protein
Chain: B: PDB Molecule:cmclc;
PDBTitle: crystal structure of a eukaryotic clc transporter
9c6d0nA_



100.0 23
PDB header:transport protein
Chain: A: PDB Molecule:clc-type fluoride/proton antiporter;
PDBTitle: crystal structure of a clc-type fluoride/proton antiporter, v319g2 mutant
10c3qe7A_



24.4 13
PDB header:transport protein
Chain: A: PDB Molecule:uracil permease;
PDBTitle: crystal structure of uracil transporter--uraa
11c2inpE_



15.9 15
PDB header:oxidoreductase
Chain: E: PDB Molecule:phenol hydroxylase component pho;
PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex
12c5xyie_



12.2 10
PDB header:ribosome
Chain: E: PDB Molecule:40s ribosomal protein s4;
PDBTitle: small subunit of trichomonas vaginalis ribosome
13c3m9hB_



10.9 38
PDB header:chaperone
Chain: B: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain of the2 mycobacterium tuberculosis proteasomal atpase mpa
14c3d9sB_



10.4 18
PDB header:membrane protein
Chain: B: PDB Molecule:aquaporin-5;
PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure
15c2kjfA_



9.4 24
PDB header:antimicrobial protein
Chain: A: PDB Molecule:carnocyclin-a;
PDBTitle: the solution structure of the circular bacteriocin2 carnocyclin a (ccla)
16c6m97A_



9.2 13
PDB header:transport protein
Chain: A: PDB Molecule:chimera protein of high affinity copper uptake protein 1
PDBTitle: crystal structure of the high-affinity copper transporter ctr1
17c2kncA_



9.1 14
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
18c5cehA_



8.1 40
PDB header:oxidoreductase/inhibitor
Chain: A: PDB Molecule:lysine-specific demethylase 5a;
PDBTitle: structure of histone lysine demethylase kdm5a in complex with2 selective inhibitor
19d1j4na_



7.8 19
Fold:Aquaporin-like
Superfamily:Aquaporin-like
Family:Aquaporin-like
20c2mgyA_



7.8 11
PDB header:membrane protein
Chain: A: PDB Molecule:translocator protein;
PDBTitle: solution structure of the mitochondrial translocator protein (tspo) in2 complex with its high-affinity ligand pk11195
21c3fhkF_



not modelled 7.4 38
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:upf0403 protein yphp;
PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide isomerase
22c4igpA_



not modelled 7.1 40
PDB header:structural protein
Chain: A: PDB Molecule:os05g0196500 protein;
PDBTitle: histone h3 lysine 4 demethylating rice jmj703 apo enzyme
23c3opwA_



not modelled 7.0 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:dna damage-responsive transcriptional repressor rph1;
PDBTitle: crystal structure of the rph1 catalytic core
24c5yknA_



not modelled 6.7 40
PDB header:gene regulation
Chain: A: PDB Molecule:probable lysine-specific demethylase jmj14;
PDBTitle: crystal structure of arabidopsis thaliana jmj14 catalytic domain
25d2qtva4



not modelled 6.7 11
Fold:Gelsolin-like
Superfamily:C-terminal, gelsolin-like domain of Sec23/24
Family:C-terminal, gelsolin-like domain of Sec23/24
26c5a1fA_



not modelled 6.6 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 5b, lysine-specific
PDBTitle: crystal structure of the catalytic domain of plu1 in complex with2 n-oxalylglycine.
27c6ip4A_



not modelled 6.5 50
PDB header:gene regulation
Chain: A: PDB Molecule:arabidopsis jmj13;
PDBTitle: crystal structure of arabidopsis thaliana jmj13 catalytic domain in2 complex with nog and an h3k27me3 peptide
28c5a1sB_



not modelled 6.5 16
PDB header:transport protein
Chain: B: PDB Molecule:citrate-sodium symporter;
PDBTitle: crystal structure of the sodium-dependent citrate symporter secits2 form salmonella enterica.
29c4k1cB_



not modelled 6.4 20
PDB header:membrane protein/metal transport
Chain: B: PDB Molecule:vacuolar calcium ion transporter;
PDBTitle: vcx1 calcium/proton exchanger
30c3twkB_



not modelled 6.4 25
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
31c2w2iC_



not modelled 6.3 40
PDB header:oxidoreductase
Chain: C: PDB Molecule:2-oxoglutarate oxygenase;
PDBTitle: crystal structure of the human 2-oxoglutarate oxygenase2 loc390245
32c4k1cA_



not modelled 6.1 19
PDB header:membrane protein/metal transport
Chain: A: PDB Molecule:vacuolar calcium ion transporter;
PDBTitle: vcx1 calcium/proton exchanger
33c5sv9B_



not modelled 5.9 15
PDB header:transport protein
Chain: B: PDB Molecule:bor1p boron transporter;
PDBTitle: structure of the slc4 transporter bor1p in an inward-facing2 conformation
34c2os2A_



not modelled 5.5 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 3a;
PDBTitle: crystal structure of jmjd2a complexed with histone h3 peptide2 trimethylated at lys36
35c3iz6Z_



not modelled 5.3 14
PDB header:ribosome
Chain: Z: PDB Molecule:40s ribosomal protein s30 (s30e);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
36c2q8eB_



not modelled 5.3 40
PDB header:oxidoreductase
Chain: B: PDB Molecule:jmjc domain-containing histone demethylation protein 3a;
PDBTitle: specificity and mechanism of jmjd2a, a trimethyllysine-specific2 histone demethylase
37c6hu9l_



not modelled 5.1 25
PDB header:oxidoreductase/electron transport
Chain: L: PDB Molecule:cytochrome b-c1 complex subunit 1, mitochondrial;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
38c6hu9x_



not modelled 5.1 25
PDB header:oxidoreductase/electron transport
Chain: X: PDB Molecule:
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
39c5x1gC_



not modelled 5.0 6
PDB header:structural protein
Chain: C: PDB Molecule:wasp homolog-associated protein with actin, membranes and
PDBTitle: whamm's microtubule binding motif

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below