Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0174_(mce1F)_205229_206776
DateTue Jul 23 14:50:22 BST 2019
Unique Job IDa10e320af6aad4cd
SequenceVLTRFIRRQL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.045 Y:40.714 Z:66.213
Model (left) based on template c6ic4C_
Top template information
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence: 99.9% Coverage: 25%
131 residues ( 25% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
287 residues ( 56%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4C_
99.9 28
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5uw8C_
99.8 23
PDB header:transport protein
Chain: C: PDB Molecule:probable phospholipid abc transporter-binding protein mlad;
PDBTitle: structure of e. coli mce protein mlad, core mce domain
3c5uvnD_
99.3 19
PDB header:transport protein
Chain: D: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
4c5uvnE_
99.3 19
PDB header:transport protein
Chain: E: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
5c5uvnB_
99.3 19
PDB header:transport protein
Chain: B: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
6c5uvnA_
99.3 19
PDB header:transport protein
Chain: A: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
7c5uvnF_
99.3 19
PDB header:transport protein
Chain: F: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
8c5uvnC_
99.3 19
PDB header:transport protein
Chain: C: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
9c1qu7A_
96.0 11
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
10c3g67A_
93.7 9
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
11c5xbjA_
93.0 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar hook-associated protein flgk;
PDBTitle: the structure of the flagellar hook junction protein hap1 (flgk) from2 campylobacter jejuni
12c1wyyB_
91.5 10
PDB header:viral protein
Chain: B: PDB Molecule:e2 glycoprotein;
PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
13c3cwgA_
90.2 12
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
14c2ch7A_
90.0 11
PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
15c4ut1A_
88.0 14
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook-associated protein;
PDBTitle: the structure of the flagellar hook junction protein flgk2 from burkholderia pseudomallei
16c3zx6A_
86.9 12
PDB header:signaling
Chain: A: PDB Molecule:hamp, methyl-accepting chemotaxis protein i;
PDBTitle: structure of hamp(af1503)-tsr fusion - hamp (a291v) mutant
17c2d4yA_
84.5 15
PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
18c2j5uB_
84.1 29
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
19c6e6aB_
83.7 17
PDB header:protein binding
Chain: B: PDB Molecule:inclusion membrane protein a;
PDBTitle: triclinic crystal form of inca g144a point mutant
20c5u0pU_
82.2 9
PDB header:transcription
Chain: U: PDB Molecule:mediator complex subunit 21;
PDBTitle: cryo-em structure of the transcriptional mediator
21c2wpqA_
not modelled 80.9 8
PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in-2 register fusion)
22c2yfaA_
not modelled 80.9 12
PDB header:receptor
Chain: A: PDB Molecule:methyl-accepting chemotaxis transducer;
PDBTitle: x-ray structure of mcps ligand binding domain in complex with malate
23c3lnrA_
not modelled 77.6 15
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
24c2vs0B_
not modelled 76.5 13
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
25c1deqF_
not modelled 74.9 8
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
26c2qf4A_
not modelled 69.4 17
PDB header:structural protein
Chain: A: PDB Molecule:cell shape determining protein mrec;
PDBTitle: high resolution structure of the major periplasmic domain from the2 cell shape-determining filament mrec (orthorhombic form)
27c2nrjA_
not modelled 68.9 10
PDB header:toxin
Chain: A: PDB Molecule:hbl b protein;
PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus
28c6b7nC_
not modelled 68.0 12
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
29d1ykhb1
not modelled 67.9 10
Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
30d1st6a4
not modelled 66.7 14
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
31c4iogD_
not modelled 66.2 19
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
32c4abxB_
not modelled 65.9 12
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair protein recn;
PDBTitle: crystal structure of deinococcus radiodurans recn coiled-2 coil domain
33c3euhB_
not modelled 64.4 12
PDB header:cell cycle
Chain: B: PDB Molecule:chromosome partition protein mukf;
PDBTitle: crystal structure of the muke-mukf complex
34c2ieqC_
not modelled 64.1 10
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
35c2qihA_
not modelled 64.0 7
PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from moraxella2 catarrhalis
36d1eq1a_
not modelled 63.9 10
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
37c6gajA_
not modelled 62.2 9
PDB header:viral protein
Chain: A: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail (iodide)
38c1kmiZ_
not modelled 62.1 16
PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
39c3gvmA_
not modelled 61.4 11
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
40c2l81A_
not modelled 61.4 13
PDB header:cell adhesion
Chain: A: PDB Molecule:enhancer of filamentation 1;
PDBTitle: solution nmr structure of the serine-rich domain of hef1 (enhancer of2 filamentation 1) from homo sapiens, northeast structural genomics3 consortium target hr5554a
41c3ojaB_
not modelled 60.3 11
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
42c5wwlN_
not modelled 59.7 12
PDB header:cell cycle
Chain: N: PDB Molecule:kinetochore protein nnf1;
PDBTitle: crystal structure of the schizogenesis pombe kinetochore mis12c2 subcomplex
43c1ei3E_
not modelled 59.6 8
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
44c3ur1C_
not modelled 58.8 10
PDB header:immune system
Chain: C: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: the structure of a ternary complex between chea domains p4 and p5 with2 chew and with a truncated fragment of tm14, a chemoreceptor analog3 from thermotoga maritima.
45c5szsC_
not modelled 58.2 11
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: glycan shield and epitope masking of a coronavirus spike protein2 observed by cryo-electron microscopy
46c2p22A_
not modelled 56.7 16
PDB header:transport protein
Chain: A: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: structure of the yeast escrt-i heterotetramer core
47c6gy6Q_
not modelled 56.7 11
PDB header:toxin
Chain: Q: PDB Molecule:xaxa;
PDBTitle: xaxab pore complex from xenorhabdus nematophila
48c4rh7A_
not modelled 55.8 3
PDB header:motor protein
Chain: A: PDB Molecule:green fluorescent protein/cytoplasmic dynein 2 heavy chain
PDBTitle: crystal structure of human cytoplasmic dynein 2 motor domain in2 complex with adp.vi
49c5zhyA_
not modelled 55.2 10
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, spike glycoprotein;
PDBTitle: structural characterization of the hcov-229e fusion core
50c3zbhC_
not modelled 55.0 13
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
51c1deqO_
not modelled 54.1 14
PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
52c2j9wB_
not modelled 53.7 13
PDB header:protein transport
Chain: B: PDB Molecule:vps28-prov protein;
PDBTitle: structural insight into the escrt-i-ii link and its role in mvb2 trafficking
53d1st6a3
not modelled 53.2 12
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
54c6o7xa_
not modelled 51.3 11
PDB header:membrane protein
Chain: A: PDB Molecule:vacuolar atp synthase catalytic subunit a;
PDBTitle: saccharomyces cerevisiae v-atpase stv1-v1vo state 3
55c5lp5F_
not modelled 50.7 13
PDB header:hydrolase/antibiotic
Chain: F: PDB Molecule:rod shape-determining protein (mrec);
PDBTitle: complex between penicillin-binding protein (pbp2) and mrec from2 helicobacter pylori
56d2j9ua1
not modelled 50.5 10
Fold:Four-helical up-and-down bundle
Superfamily:VPS28 C-terminal domain-like
Family:VPS28 C-terminal domain-like
57c4lwsA_
not modelled 48.8 8
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
58c5y2gA_
not modelled 48.2 13
PDB header:toxin
Chain: A: PDB Molecule:maltose-binding periplasmic protein,protein b;
PDBTitle: structure of mbp tagged gbs camp
59d1h9ra2
not modelled 46.8 16
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
60d1quua1
not modelled 46.7 12
Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
61c5j65A_
not modelled 45.8 10
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry6aa;
PDBTitle: crystal structure of trypsin activated cry6aa
62c5x5bB_
not modelled 44.9 13
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: prefusion structure of sars-cov spike glycoprotein, conformation 2
63c6gapB_
not modelled 44.3 10
PDB header:viral protein
Chain: B: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t3d reovirus sigma1 coiled coil tail and body
64c4lwsB_
not modelled 44.1 9
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
65c1ei3C_
not modelled 43.6 9
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
66c5i08A_
not modelled 42.9 14
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, envelope glycoprotein chimera;
PDBTitle: prefusion structure of a human coronavirus spike protein
67d1guta_
not modelled 42.0 36
Fold:OB-fold
Superfamily:MOP-like
Family:Molybdate/tungstate binding protein MOP
68c5n76C_
not modelled 41.0 28
PDB header:nickel-binding protein
Chain: C: PDB Molecule:coot;
PDBTitle: crystal structure of the apo-form of the co dehydrogenase accessory2 protein coot from rhodospirillum rubrum
69d1h9ma2
not modelled 40.7 28
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
70c4nl6C_
not modelled 40.4 7
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
71c3j6vL_
not modelled 39.7 22
PDB header:ribosome
Chain: L: PDB Molecule:28s ribosomal protein s12, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
72c5zuvB_
not modelled 38.8 10
PDB header:viral protein, inhibitor
Chain: B: PDB Molecule:spike glycoprotein,spike glycoprotein,inhibitor ek1;
PDBTitle: crystal structure of the human coronavirus 229e hr1 motif in complex2 with pan-covs inhibitor ek1
73c3c12A_
not modelled 38.7 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar protein;
PDBTitle: crystal structure of flgd from xanthomonas campestris:2 insights into the hook capping essential for flagellar3 assembly
74d2uubl1
not modelled 38.4 32
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
75c5xlrC_
not modelled 38.4 13
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: structure of sars-cov spike glycoprotein
76c5tgyA_
not modelled 38.2 16
PDB header:unknown function
Chain: A: PDB Molecule:ps1;
PDBTitle: nmr structure of holo-ps1
77c3nwiC_
not modelled 38.1 13
PDB header:transport protein
Chain: C: PDB Molecule:zinc transport protein zntb;
PDBTitle: the soluble domain structure of the zntb zn2+ efflux system
78c6grjG_
not modelled 37.9 7
PDB header:toxin
Chain: G: PDB Molecule:ahlb;
PDBTitle: structure of the ahlb pore of the tripartite alpha-pore forming toxin,2 ahl, from aeromonas hydrophila.
79c1zn1L_
not modelled 37.4 21
PDB header:biosynthetic/structural protein/rna
Chain: L: PDB Molecule:30s ribosomal protein s12;
PDBTitle: coordinates of rrf fitted into cryo-em map of the 70s post-termination2 complex
80c6cv0C_
not modelled 37.2 7
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of infectious bronchitis2 coronavirus spike protein
81c1bf5A_
not modelled 37.1 9
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription 1-
PDBTitle: tyrosine phosphorylated stat-1/dna complex
82c5wrgB_
not modelled 37.1 13
PDB header:virus like particle
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: sars-cov spike glycoprotein
83c1quuA_
not modelled 36.8 11
PDB header:contractile protein
Chain: A: PDB Molecule:human skeletal muscle alpha-actinin 2;
PDBTitle: crystal structure of two central spectrin-like repeats from alpha-2 actinin
84c6o7ua_
not modelled 35.3 10
PDB header:membrane protein
Chain: A: PDB Molecule:
PDBTitle: saccharomyces cerevisiae v-atpase stv1-vo
85c3dyjA_
not modelled 35.3 9
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: crystal structure a talin rod fragment
86d1h9ma1
not modelled 34.4 24
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
87c5x5fC_
not modelled 33.5 12
PDB header:viral protein
Chain: C: PDB Molecule:s protein;
PDBTitle: prefusion structure of mers-cov spike glycoprotein, conformation 2
88c5cwsC_
not modelled 32.9 7
PDB header:protein transport
Chain: C: PDB Molecule:nucleoporin nsp1;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
89c6gaoC_
not modelled 32.7 8
PDB header:viral protein
Chain: C: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail and body
90c6cs2A_
not modelled 32.6 13
PDB header:viral protein/hydrolase
Chain: A: PDB Molecule:spike glycoprotein,fibritin;
PDBTitle: sars spike glycoprotein - human ace2 complex, stabilized variant, all2 ace2-bound particles
91c6nzkB_
not modelled 32.5 14
PDB header:viral protein
Chain: B: PDB Molecule:spike surface glycoprotein;
PDBTitle: structural basis for human coronavirus attachment to sialic acid2 receptors
92c1yvlB_
not modelled 32.5 9
PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1
93c5gasN_
not modelled 31.9 9
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
94c4f7gB_
not modelled 31.7 14
PDB header:cell adhesion
Chain: B: PDB Molecule:talin-1;
PDBTitle: crystal structure of talin autoinhibition complex
95d1k0ha_
not modelled 31.6 22
Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:gpFII-like
96c5dfzA_
not modelled 31.2 8
PDB header:transferase
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 38;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
97c3ghgI_
not modelled 31.0 8
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
98c6iiuA_
not modelled 30.7 13
PDB header:signaling protein
Chain: A: PDB Molecule:soluble cytochrome b562,thromboxane a2 receptor,rubredoxin,
PDBTitle: crystal structure of the human thromboxane a2 receptor bound to2 ramatroban
99c4n21E_
not modelled 30.4 6
PDB header:viral protein
Chain: E: PDB Molecule:gp2 ectodomain;
PDBTitle: crystal structure of the gp2 core domain from the california academy2 of science virus
100c4jrbA_
not modelled 30.2 17
PDB header:lipid binding protein
Chain: A: PDB Molecule:green fluorescent protein;
PDBTitle: structure of cockroach allergen bla g 1 tandem repeat as a egfp fusion
101d1wa8a1
not modelled 30.1 8
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
102d1yvia1
not modelled 30.0 17
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Phosphorelay protein-like
103c3vkhA_
not modelled 29.8 11
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
104c2kg7B_
not modelled 29.7 8
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
105d2qall1
not modelled 29.7 22
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
106d1i94l_
not modelled 29.2 32
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
107c3jclC_
not modelled 29.1 9
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of a coronavirus spike glycoprotein2 trimer
108c2dq3A_
not modelled 29.1 9
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of aq_298
109d1hcia4
not modelled 28.6 9
Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
110c2iakA_
not modelled 27.7 7
PDB header:cell adhesion
Chain: A: PDB Molecule:bullous pemphigoid antigen 1, isoform 5;
PDBTitle: crystal structure of a protease resistant fragment of the plakin2 domain of bullous pemphigoid antigen1 (bpag1)
111c6nb3B_
not modelled 27.6 15
PDB header:virus
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: mers-cov complex with human neutralizing lca60 antibody fab fragment2 (state 1)
112c2gl2B_
not modelled 27.5 15
PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,y69g) of2 bacterial adhesin fada
113c6ezvX_
not modelled 26.6 12
PDB header:toxin
Chain: X: PDB Molecule:non-hemolytic enterotoxin lytic component l1;
PDBTitle: the cytotoxin maka from vibrio cholerae
114d1v5va1
not modelled 26.6 20
Fold:Elongation factor/aminomethyltransferase common domain
Superfamily:Aminomethyltransferase beta-barrel domain
Family:Aminomethyltransferase beta-barrel domain
115c2mpnA_
not modelled 26.3 17
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
116c3ck6E_
not modelled 26.2 8
PDB header:structural protein
Chain: E: PDB Molecule:putative membrane transport protein;
PDBTitle: crystal structure of zntb cytoplasmic domain from vibrio2 parahaemolyticus rimd 2210633
117d2cu6a1
not modelled 25.9 14
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
118c5tvbB_
not modelled 25.1 13
PDB header:transferase
Chain: B: PDB Molecule:nucleoprotein tpr;
PDBTitle: structure of the tpr oligomerization domain
119c2odvA_
not modelled 24.9 8
PDB header:structural protein
Chain: A: PDB Molecule:plectin 1;
PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant.
120c1wncE_
not modelled 24.1 13
PDB header:viral protein
Chain: E: PDB Molecule:e2 glycoprotein;
PDBTitle: crystal structure of the sars-cov spike protein fusion core

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below