Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0182c_(sigG)_213026_214138
DateTue Jul 23 14:50:23 BST 2019
Unique Job ID564d0f37da8fa525
SequenceMRTSPMPAKF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.472 Y:39.428 Z:71.918
Model (left) based on template c5xe7A_
Top template information
PDB header:dna binding protein
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigj;
PDBTitle: crystal structure of mycobacterium tuberculosis extracytoplasmic2 function sigma factor sigj
Confidence and coverage
Confidence:100.0% Coverage: 72%
265 residues ( 72% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
333 residues ( 90%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xe7A_
100.0 29
PDB header:dna binding protein
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigj;
PDBTitle: crystal structure of mycobacterium tuberculosis extracytoplasmic2 function sigma factor sigj
2c5uxxC_
100.0 26
PDB header:dna binding protein/unknown function
Chain: C: PDB Molecule:rna polymerase sigma factor;
PDBTitle: co-crystal structure of the sigma factor rpoe in complex with the2 anti-sigma factor nepr from bartonella quintana
3c3t0yA_
100.0 22
PDB header:transcription regulator/protein binding
Chain: A: PDB Molecule:response regulator;
PDBTitle: structure of the phyr anti-anti-sigma domain bound to the anti-sigma2 factor, nepr
4c2lfwA_
100.0 22
PDB header:signaling protein
Chain: A: PDB Molecule:phyr sigma-like domain;
PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1
5c4cxfA_
99.9 28
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor cnrh;
PDBTitle: structure of cnrh in complex with the cytosolic domain of cnry
6c5wurB_
99.9 27
PDB header:metal binding protein
Chain: B: PDB Molecule:ecf rna polymerase sigma factor sigw;
PDBTitle: crystal structure of sigw in complex with its anti-sigma rsiw, an2 oxdized form
7c6dvdF_
99.9 29
PDB header:transferase/dna
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigl;
PDBTitle: crystal structure of mycobacterium tuberculosis transcription2 initiation complex(ecf sigma factor l) with 6 nt spacer and bromine3 labelled in position "-11
8c5zx3F_
99.9 27
PDB header:transcription
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigh;
PDBTitle: mycobacterium tuberculosis rna polymerase holoenzyme with ecf sigma2 factor sigma h
9c6c03A_
99.9 29
PDB header:transcription
Chain: A: PDB Molecule:putative rna polymerase ecf-subfamily sigma factor;
PDBTitle: the crystal structure streptomyces venezuelae rsbn-bldn complex
10c1or7A_
99.9 25
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
11c3vdoA_
99.9 19
PDB header:dna binding protein/protein binding
Chain: A: PDB Molecule:rna polymerase sigma factor sigk;
PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
12c5ipmF_
99.9 17
PDB header:transcription, transferase/dna/rna
Chain: F: PDB Molecule:rna polymerase sigma factor rpos;
PDBTitle: sigmas-transcription initiation complex with 4-nt nascent rna
13c2q1zA_
99.9 18
PDB header:transcription
Chain: A: PDB Molecule:rpoe, ecf sige;
PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr
14c1rp3G_
99.9 18
PDB header:transcription
Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia);
PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma complex, sigma-2 28/flgm
15c5tw1F_
99.8 19
PDB header:transcription activator/transferase/dna
Chain: F: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: crystal structure of a mycobacterium smegmatis transcription2 initiation complex with rbpa
16c3mzyA_
99.8 21
PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
17c6c05F_
99.8 18
PDB header:transcription
Chain: F: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: mycobacterium tuberculosis rnap holo/rbpa in relaxed state
18c3wodF_
99.8 19
PDB header:transferase/transcription
Chain: F: PDB Molecule:rna polymerase sigma factor;
PDBTitle: rna polymerase-gp39 complex
19d1h3la_
99.7 35
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
20d1or7b2
99.7 29
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
21d1or7a2
not modelled 99.7 27
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
22d1nwwa_
not modelled 99.7 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Limonene-1,2-epoxide hydrolase-like
23d3en8a1
not modelled 99.6 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
24c3wmdA_
not modelled 99.6 15
PDB header:isomerase
Chain: A: PDB Molecule:probable monensin biosynthesis isomerase;
PDBTitle: crystal structure of epoxide hydrolase monbi
25c3msoA_
not modelled 99.6 13
PDB header:isomerase
Chain: A: PDB Molecule:steroid delta-isomerase;
PDBTitle: crystal structure of a steroid delta-isomerase (np_250810.1) from2 pseudomonas aeruginosa at 2.57 a resolution
26c3n0rA_
not modelled 99.6 21
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator;
PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
27c2a6eF_
not modelled 99.6 19
PDB header:transferase
Chain: F: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme
28c5cxoA_
not modelled 99.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: intriguing role of epoxide hydrolase/cyclase-like enzyme salbiii in2 pyran ring formation in polyether salinomycin
29c3f8xD_
not modelled 99.6 11
PDB header:isomerase
Chain: D: PDB Molecule:putative delta-5-3-ketosteroid isomerase;
PDBTitle: crystal structure of a putative delta-5-3-ketosteroid isomerase2 (eca2236) from pectobacterium atrosepticum scri1043 at 1.55 a3 resolution
30c2o7gA_
not modelled 99.6 28
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the pribnow box recognition region of sigc from2 mycobacterium tuberculosis
31c1l9uH_
not modelled 99.6 20
PDB header:transcription
Chain: H: PDB Molecule:sigma factor siga;
PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
32c4h3uB_
not modelled 99.6 12
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of hypothetical protein with ketosteroid isomerase-2 like protein fold from catenulispora acidiphila dsm 44928
33c3f40A_
not modelled 99.6 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_677363.1) from cytophaga hutchinsonii atcc 33406 at 1.27 a3 resolution
34d2bnga1
not modelled 99.6 14
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Limonene-1,2-epoxide hydrolase-like
35c4lmiA_
not modelled 99.6 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of putative ketosteroid isomerase from kribbella2 flavida dsm 17836
36d2k54a1
not modelled 99.5 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Atu0742-like
37c3b4oB_
not modelled 99.5 11
PDB header:biosynthetic protein
Chain: B: PDB Molecule:phenazine biosynthesis protein a/b;
PDBTitle: crystal structure of phenazine biosynthesis protein phza/b2 from burkholderia cepacia r18194, apo form
38c3h3hA_
not modelled 99.5 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized snoal-like protein;
PDBTitle: crystal structure of a snoal-like protein of unknown function2 (bth_ii0226) from burkholderia thailandensis e264 at 1.60 a3 resolution
39d1ohpa1
not modelled 99.5 19
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
40c3fh1A_
not modelled 99.5 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (mll8193)2 from mesorhizobium loti at 1.60 a resolution
41d1oh0a_
not modelled 99.5 21
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
42c5evhA_
not modelled 99.5 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of known function protein from kribbella flavida dsm2 17836
43d3dm8a1
not modelled 99.5 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
44d3dmca1
not modelled 99.5 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
45c3ff2A_
not modelled 99.5 17
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized cystatin fold protein (yp_497570.1) from
PDBTitle: crystal structure of an uncharacterized cystatin fold protein2 (saro_2299) from novosphingobium aromaticivorans dsm at 1.90 a3 resolution
46c3ff0A_
not modelled 99.5 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:phenazine biosynthesis protein phzb 2;
PDBTitle: crystal structure of a phenazine biosynthesis-related protein (phzb2)2 from pseudomonas aeruginosa at 1.90 a resolution
47d2a15a1
not modelled 99.4 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
48c3k0zB_
not modelled 99.4 13
PDB header:lyase
Chain: B: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of putative polyketide cyclase (np_977253.1) from2 bacillus cereus atcc 10987 at 1.91 a resolution
49c6d34B_
not modelled 99.4 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:terc;
PDBTitle: apo crystal structure of terc, a terfestatin biosynthesis enzyme
50c3fljA_
not modelled 99.4 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a
PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution
51d3ebta1
not modelled 99.4 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
52c3rgaA_
not modelled 99.4 13
PDB header:isomerase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: crystal structure of epoxide hydrolase for polyether lasalocid a2 biosynthesis
53d3ec9a1
not modelled 99.4 18
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
54c4kvhA_
not modelled 99.4 10
PDB header:unknown function
Chain: A: PDB Molecule:ketosteroid isomerase fold protein hmuk_0747;
PDBTitle: crystal structure of ketosteroid isomerase fold protein hmuk_0747
55c1z1sA_
not modelled 99.4 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa3332;
PDBTitle: crystal structure of putative isomerase pa3332 from2 pseudomonas aeruginosa
56d1tuha_
not modelled 99.4 20
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Hypothetical protein egc068 from a soil-derived mobile gene cassette
57c1tuhA_
not modelled 99.4 20
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein egc068;
PDBTitle: structure of bal32a from a soil-derived mobile gene cassette
58c3f14A_
not modelled 99.4 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_680363.1) from cytophaga hutchinsonii atcc 33406 at 1.45 a3 resolution
59c5aigA_
not modelled 99.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:limonene-1,2-epoxide hydrolase;
PDBTitle: discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries. tomsk-sample-3 valpromide complex
60d1s5aa_
not modelled 99.4 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
61c4igcX_
not modelled 99.4 18
PDB header:transcription, transferase
Chain: X: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: x-ray crystal structure of escherichia coli sigma70 holoenzyme
62d1z1sa1
not modelled 99.4 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
63c3hk4B_
not modelled 99.4 8
PDB header:lyase
Chain: B: PDB Molecule:mlr7391 protein;
PDBTitle: crystal structure of a putative snoal-like polyketide cyclase2 [carbohydrate phosphatase] (mlr7391) from mesorhizobium loti at 1.963 a resolution
64c3hugA_
not modelled 99.4 24
PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
65c4u13B_
not modelled 99.4 19
PDB header:transferase
Chain: B: PDB Molecule:putative polyketide cyclase sma1630;
PDBTitle: crystal structure of putative polyketide cyclase (protein sma1630)2 from sinorhizobium meliloti at 2.3 a resolution
66c3fgyB_
not modelled 99.3 14
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein (bxe_b1094) from burkholderia2 xenovorans lb400 at 1.59 a resolution
67d3dxoa1
not modelled 99.3 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Atu0744-like
68d2f99a1
not modelled 99.3 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
69c5aiiP_
not modelled 99.3 13
PDB header:hydrolase
Chain: P: PDB Molecule:limonene-1,2-epoxide hydrolase;
PDBTitle: discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries.3 ch55-sample-peg complex
70c3vepA_
not modelled 99.3 32
PDB header:membrane protein/transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-d factor;
PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda
71d1rp3a2
not modelled 99.3 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
72c3f8hA_
not modelled 99.3 17
PDB header:unknown function
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (tm1040_3560) from2 silicibacter sp. tm1040 at 2.00 a resolution
73d1or7a1
not modelled 99.3 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
74d2gexa1
not modelled 99.3 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
75c2o8xA_
not modelled 99.3 26
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
76d1sjwa_
not modelled 99.3 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
77c6a5hB_
not modelled 99.3 17
PDB header:biosynthetic protein
Chain: B: PDB Molecule:101015d;
PDBTitle: the structure of [4+2] and [6+4] cyclase in the biosynthetic pathway2 of unidentified natural product
78c3i0yC_
not modelled 99.3 11
PDB header:isomerase
Chain: C: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (xcc0381) from2 xanthomonas campestris pv. campestris at 1.50 a resolution
79c3f7xA_
not modelled 99.2 14
PDB header:unknown function
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (pp0894) from2 pseudomonas putida kt2440 at 1.24 a resolution
80c3g8zA_
not modelled 99.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function with cystatin-like fold;
PDBTitle: crystal structure of protein of unknown function with cystatin-like2 fold (np_639274.1) from xanthomonas campestris at 1.90 a resolution
81d1s7oa_
not modelled 99.2 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
82d2geya1
not modelled 99.2 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
83c3g0kA_
not modelled 99.2 6
PDB header:ca-binding protein
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: crystal structure of a protein of unknown function with a cystatin-2 like fold (saro_2880) from novosphingobium aromaticivorans dsm at3 1.30 a resolution
84c3grdA_
not modelled 99.2 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-superfamily protein;
PDBTitle: crystal structure of ntf2-superfamily protein with unknown function2 (np_977240.1) from bacillus cereus atcc 10987 at 1.25 a resolution
85c3iydF_
not modelled 99.2 18
PDB header:transcription/dna
Chain: F: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
86d1xsva_
not modelled 99.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
87c3kkgA_
not modelled 99.2 10
PDB header:lyase
Chain: A: PDB Molecule:putative snoal-like polyketide cyclase;
PDBTitle: crystal structure of putative snoal-like polyketide cyclase2 (yp_509242.1) from jannaschia sp. ccs1 at 1.40 a resolution
88c5fgmA_
not modelled 99.2 34
PDB header:hydrolase
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigr;
PDBTitle: streptomyces coelicolor sigr region 4
89c5x9jB_
not modelled 99.2 13
PDB header:isomerase
Chain: B: PDB Molecule:prhc;
PDBTitle: strucutre of prhc from penicillium brasilianum nbrc 6234
90c3f9sB_
not modelled 99.1 12
PDB header:lyase
Chain: B: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (lferr_0659) from2 acidithiobacillus ferrooxidans atcc at 1.76 a resolution
91c4lgqA_
not modelled 99.1 12
PDB header:lyase
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (cv_0247) from2 chromobacterium violaceum atcc 12472 at 2.72 a resolution
92c3ehcA_
not modelled 99.1 13
PDB header:unknown function
Chain: A: PDB Molecule:snoal-like polyketide cyclase;
PDBTitle: crystal structure of a snoal-like polyketide cyclase (atu3018) from2 agrobacterium tumefaciens str. c58 at 2.12 a resolution
93c5x7lA_
not modelled 99.1 17
PDB header:isomerase
Chain: A: PDB Molecule:tsrd;
PDBTitle: structure of tsrd from streptomyces laurentii
94d1smyf2
not modelled 99.1 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
95c4qicC_
not modelled 99.1 19
PDB header:signaling protein/dna binding protein
Chain: C: PDB Molecule:sensory transduction regulatory protein, anti-anti-sigma
PDBTitle: co-crystal structure of anti-anti-sigma factor phyr complexed with2 anti-sigma factor nepr from bartonella quintana
96d1m98a2
not modelled 99.1 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Orange carotenoid protein, C-terminal domain
97d1ttya_
not modelled 98.9 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
98d1rp3a3
not modelled 98.9 11
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
99c6fejA_
not modelled 98.9 13
PDB header:photosynthesis
Chain: A: PDB Molecule:all4940 protein;
PDBTitle: anabaena apo-c-terminal domain homolog protein
100c5x9kA_
not modelled 98.9 9
PDB header:isomerase
Chain: A: PDB Molecule:austinol synthesis protein h;
PDBTitle: strucutre of aush from aspergillus nidulans
101c3ke7A_
not modelled 98.9 12
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (yp_001303366.1)2 from parabacteroides distasonis atcc 8503 at 1.45 a resolution
102c5wqhE_
not modelled 98.9 11
PDB header:isomerase
Chain: E: PDB Molecule:isomerase trt14;
PDBTitle: structure of fungal meroterpenoid isomerase trt14 complexed with2 substrate analog and endo-terretonin d
103d1ku7a_
not modelled 98.8 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
104d1ku3a_
not modelled 98.8 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
105c3t72o_
not modelled 98.7 23
PDB header:transcription/dna
Chain: O: PDB Molecule:pho box dna (strand 1);
PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex
106d2p7vb1
not modelled 98.6 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
107c3h51A_
not modelled 98.5 8
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin dependent protein kinase ii
PDBTitle: crystal structure of putative calcium/calmodulin dependent protein2 kinase ii association domain (np_636218.1) from xanthomonas3 campestris at 1.70 a resolution
108d2rcda1
not modelled 98.5 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BxeB1374-like
109d2gxfa1
not modelled 98.4 14
Fold:Cystatin-like
Superfamily:NTF2-like
Family:YybH-like
110c3gwrA_
not modelled 98.3 16
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin-dependent protein kinase type
PDBTitle: crystal structure of putative calcium/calmodulin-dependent protein2 kinase type ii association domain (yp_315894.1) from thiobacillus3 denitrificans atcc 25259 at 2.00 a resolution
111d1yioa1
not modelled 98.3 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
112c3f7sA_
not modelled 98.2 13
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution
113c3robC_
not modelled 98.2 10
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved protein from planctomyces2 limnophilus dsm 3776
114c3qp5C_
not modelled 98.2 14
PDB header:transcription
Chain: C: PDB Molecule:cvir transcriptional regulator;
PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl)
115d3cnxa1
not modelled 98.2 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SAV4671-like
116c4lfuA_
not modelled 98.1 23
PDB header:dna binding protein
Chain: A: PDB Molecule:regulatory protein sdia;
PDBTitle: crystal structure of escherichia coli sdia in the space group c2
117c3sztB_
not modelled 98.1 11
PDB header:transcription
Chain: B: PDB Molecule:quorum-sensing control repressor;
PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
118d3b7ca1
not modelled 98.1 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SO0125-like
119c4ovmE_
not modelled 98.1 14
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein sgcj;
PDBTitle: crystal structure of sgcj protein from streptomyces carzinostaticus
120c2q0oA_
not modelled 98.1 28
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional activator protein trar;
PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite