Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0186Ac_(RVBD0186Ac)_218388_218549
DateTue Jul 23 14:50:24 BST 2019
Unique Job ID5580cb336215e297
SequenceMRVIRMTNYE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:21.538 Y:18.011 Z:16.676
Model (left) based on template c5xknE_
Top template information
PDB header:transferase/signaling protein
Chain: E: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
Confidence and coverage
Confidence: 60.7% Coverage: 21%
11 residues ( 21% of your sequence) have been modelled with 60.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xknE_



60.7 55
PDB header:transferase/signaling protein
Chain: E: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
2c5xknF_



60.7 55
PDB header:transferase/signaling protein
Chain: F: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
3c2mw0A_



27.8 60
PDB header:protein binding
Chain: A: PDB Molecule:kalata b7;
PDBTitle: kalata b7 ser mutant
4c2elnA_



27.4 50
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 11th c2h2 zinc finger of human2 zinc finger protein 406
5d1bx7a_



22.4 28
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Leech antihemostatic proteins
Family:Huristasin-like
6c3zxqA_



19.5 20
PDB header:transferase
Chain: A: PDB Molecule:hypoxia sensor histidine kinase response regulator dost;
PDBTitle: crystal structure of the atp-binding domain of mycobacterium2 tuberculosis dost
7d2j7ja2



19.0 60
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
8d1ddza2



16.9 40
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
9d1ddza1



16.4 60
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
10d1ejab_



16.2 45
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Leech antihemostatic proteins
Family:Huristasin-like
11c5ztpB_



15.4 27
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: carbonic anhydrase from glaciozyma antarctica
12c3lasA_



15.4 20
PDB header:lyase
Chain: A: PDB Molecule:putative carbonic anhydrase;
PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution
13c2a8cE_



15.1 40
PDB header:lyase
Chain: E: PDB Molecule:carbonic anhydrase 2;
PDBTitle: haemophilus influenzae beta-carbonic anhydrase
14c3j0cH_



15.0 32
PDB header:virus
Chain: H: PDB Molecule:e2 envelope glycoprotein;
PDBTitle: models of e1, e2 and cp of venezuelan equine encephalitis virus tc-832 strain restrained by a near atomic resolution cryo-em map
15c1ylkA_



14.9 20
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322;
PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate
16d1dx5i1



14.8 36
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:EGF-type module
17c4o1jB_



14.8 40
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structures of two tetrameric beta-carbonic anhydrases from the2 filamentous ascomycete sordaria macrospora.
18d1i6pa_



14.3 50
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
19c1ddzA_



14.1 60
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1
20c2w3nA_



13.8 40
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase 2;
PDBTitle: structure and inhibition of the co2-sensing carbonic anhydrase can22 from the pathogenic fungus cryptococcus neoformans
21c2a5vB_



not modelled 13.5 30
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic
PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form
22c2fynO_



not modelled 13.3 35
PDB header:oxidoreductase
Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur
PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex
23c5cxkG_



not modelled 13.3 50
PDB header:lyase
Chain: G: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structure of beta carbonic anhydrase from vibrio cholerae
24c3eyxB_



not modelled 13.1 40
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae
25c4o1kA_



not modelled 12.6 50
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structures of two tetrameric beta-carbonic anhydrases from the2 filamentous ascomycete sordaria macrospora.
26d1g5ca_



not modelled 12.5 27
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
27c3tenD_



not modelled 11.9 30
PDB header:hydrolase
Chain: D: PDB Molecule:cs2 hydrolase;
PDBTitle: holo form of carbon disulfide hydrolase
28c4biyD_



not modelled 11.8 25
PDB header:transferase
Chain: D: PDB Molecule:sensor protein cpxa;
PDBTitle: crystal structure of cpxahdc (monoclinic form 2)
29c3ucoB_



not modelled 11.8 50
PDB header:lyase/lyase inhibitor
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide
30d1ekja_



not modelled 11.6 27
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
31c5swcE_



not modelled 11.5 40
PDB header:lyase
Chain: E: PDB Molecule:carbonic anhydrase;
PDBTitle: the structure of the beta-carbonic anhydrase ccaa
32c3vrkA_



not modelled 11.1 27
PDB header:hydrolase
Chain: A: PDB Molecule:carbonyl sulfide hydrolase;
PDBTitle: crystal structutre of thiobacillus thioparus thi115 carbonyl sulfide2 hydrolase / thiocyanate complex
33c2xfbI_



not modelled 11.0 32
PDB header:virus
Chain: I: PDB Molecule:e2 envelope glycoprotein;
PDBTitle: the chikungunya e1 e2 envelope glycoprotein complex fit into2 the sindbis virus cryo-em map
34c3n43B_



not modelled 10.9 32
PDB header:viral protein
Chain: B: PDB Molecule:e2 envelope glycoprotein;
PDBTitle: crystal structures of the mature envelope glycoprotein complex2 (trypsin cleavage) of chikungunya virus.
35c6gwuB_



not modelled 10.9 36
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: carbonic anhydrase cance103p from candida albicans
36c2e76D_



not modelled 10.9 35
PDB header:photosynthesis
Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
37c6avjB_



not modelled 10.5 70
PDB header:metal binding protein
Chain: B: PDB Molecule:cdgsh iron-sulfur domain-containing protein 3,
PDBTitle: crystal structure of human mitochondrial inner neet protein (mint)2 /cisd3
38d2i9wa3



not modelled 10.5 47
Fold:Sec-C motif
Superfamily:Sec-C motif
Family:Sec-C motif
39c4rxyA_



not modelled 10.5 50
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structure of the beta carbonic anhydrase psca3 isolated from2 pseudomonas aeruginosa
40c3q7tB_



not modelled 10.1 42
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulatory protein;
PDBTitle: 2.15a resolution structure (i41 form) of the chxr receiver domain from2 chlamydia trachomatis
41c6atyA_



not modelled 9.6 80
PDB header:toxin
Chain: A: PDB Molecule:venom protein 51.1;
PDBTitle: exploring cystine dense peptide space to open a unique molecular2 toolbox
42c6hwhB_



not modelled 9.3 53
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
43c5xjoF_



not modelled 9.2 46
PDB header:transferase/membrane protein
Chain: F: PDB Molecule:protein epidermal patterning factor 1;
PDBTitle: plant receptor erl1-tmm in complex with peptide epf1
44d2akla2



not modelled 9.0 55
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:PhnA zinc-binding domain
45c2xpoB_



not modelled 8.9 57
PDB header:transcription
Chain: B: PDB Molecule:chromatin structure modulator;
PDBTitle: crystal structure of a spt6-iws1(spn1) complex from2 encephalitozoon cuniculi, form ii
46c2xpoD_



not modelled 8.8 57
PDB header:transcription
Chain: D: PDB Molecule:chromatin structure modulator;
PDBTitle: crystal structure of a spt6-iws1(spn1) complex from2 encephalitozoon cuniculi, form ii
47c5xkjF_



not modelled 8.6 46
PDB header:transferase/membrane protein/hormone
Chain: F: PDB Molecule:protein epidermal patterning factor 2;
PDBTitle: crystal structure of plant receptor erl1-tmm in complexe with epf2
48d1omba_



not modelled 8.4 43
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
49d2bz1a1



not modelled 8.0 33
Fold:RibA-like
Superfamily:RibA-like
Family:RibA-like
50d2g45a1



not modelled 7.9 44
Fold:RING/U-box
Superfamily:RING/U-box
Family:Zf-UBP
51c1g9iI_



not modelled 7.8 44
PDB header:hydrolase/hydrolase inhibitor
Chain: I: PDB Molecule:bowman-birk type trypsin inhibitor;
PDBTitle: crystal structure of beta-trysin complex in cyclohexane
52c1p84E_



not modelled 7.6 35
PDB header:oxidoreductase
Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
53c2jr7A_



not modelled 7.5 50
PDB header:metal binding protein
Chain: A: PDB Molecule:dph3 homolog;
PDBTitle: solution structure of human desr1
54d1agga_



not modelled 7.3 43
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
55d1ywsa1



not modelled 7.3 71
Fold:Rubredoxin-like
Superfamily:CSL zinc finger
Family:CSL zinc finger
56c3n40P_



not modelled 7.1 32
PDB header:viral protein
Chain: P: PDB Molecule:p62 envelope glycoprotein;
PDBTitle: crystal structure of the immature envelope glycoprotein complex of2 chikungunya virus.
57d3cx5e1



not modelled 7.1 27
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
58c3zxoB_



not modelled 7.0 30
PDB header:transferase
Chain: B: PDB Molecule:redox sensor histidine kinase response regulator devs;
PDBTitle: crystal structure of the mutant atp-binding domain of2 mycobacterium tuberculosis doss
59c2xppB_



not modelled 6.9 57
PDB header:transcription
Chain: B: PDB Molecule:chromatin structure modulator;
PDBTitle: crystal structure of a spt6-iws1(spn1) complex from2 encephalitozoon cuniculi, form iii
60c2xpnB_



not modelled 6.8 57
PDB header:transcription
Chain: B: PDB Molecule:chromatin structure modulator;
PDBTitle: crystal structure of a spt6-iws1(spn1) complex from2 encephalitozoon cuniculi, form i
61d2glia3



not modelled 6.8 57
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
62c4rl4B_



not modelled 6.6 33
PDB header:hydrolase
Chain: B: PDB Molecule:gtp cyclohydrolase-2;
PDBTitle: crystal structure of gtp cyclohydrolase ii from helicobacter pylori2 26695
63d1wgea1



not modelled 6.5 71
Fold:Rubredoxin-like
Superfamily:CSL zinc finger
Family:CSL zinc finger
64c2yrtA_



not modelled 6.3 46
PDB header:transcription
Chain: A: PDB Molecule:chord containing protein-1;
PDBTitle: solution structure of the chord domain of human chord-2 containing protein 1
65c1bi6H_



not modelled 6.2 44
PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr structure of bromelain inhibitor vi from pineapple stem
66c2bi6H_



not modelled 6.0 44
PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr study of bromelain inhibitor vi from pineapple stem
67d1x3ca1



not modelled 6.0 67
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
68d1a1ia1



not modelled 5.8 33
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
69d1jm1a_



not modelled 5.8 45
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
70c1sx0A_



not modelled 5.8 47
PDB header:protein transport
Chain: A: PDB Molecule:seca;
PDBTitle: solution nmr structure and x-ray absorption analysis of the2 c-terminal zinc-binding domain of the seca atpase
71c1sx1A_



not modelled 5.7 47
PDB header:protein transport
Chain: A: PDB Molecule:seca;
PDBTitle: solution nmr structure and x-ray absorption analysis of the2 c-terminal zinc-binding domain of the seca atpase
72d1bdsa_



not modelled 5.6 67
Fold:Defensin-like
Superfamily:Defensin-like
Family:Defensin
73c1bdsA_



not modelled 5.6 67
PDB header:anti-hypertensive, anti-viral protein
Chain: A: PDB Molecule:bds-i;
PDBTitle: determination of the three-dimensional solution structure of the2 antihypertensive and antiviral protein bds-i from the sea anemone3 anemonia sulcata. a study using nuclear magnetic resonance and hybrid4 distance geometry-dynamical simulated annealing
74c4mi0A_



not modelled 5.6 25
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase ezh2;
PDBTitle: human enhancer of zeste (drosophila) homolog 2(ezh2)
75d1gtra2



not modelled 5.5 33
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain
76d1nzja_



not modelled 5.5 42
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain
77c1sbwI_



not modelled 5.3 30
PDB header:hydrolase/hydrolase inhibitor
Chain: I: PDB Molecule:protein (mung bean inhibitor lysin active
PDBTitle: crystal structure of mung bean inhibitor lysine active2 fragment complex with bovine beta-trypsin at 1.8a3 resolution
78d1tf3a2



not modelled 5.3 44
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
79c2odxA_



not modelled 5.3 44
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c oxidase polypeptide iv;
PDBTitle: solution structure of zn(ii)cox4
80c6mwcN_



not modelled 5.3 46
PDB header:virus/immune system
Chain: N: PDB Molecule:e2;
PDBTitle: cryoem structure of chimeric eastern equine encephalitis virus with2 fab of eeev-5 antibody
81d1ozbi_



not modelled 5.3 38
Fold:Sec-C motif
Superfamily:Sec-C motif
Family:Sec-C motif
82c1ozbI_



not modelled 5.3 38
PDB header:protein transport
Chain: I: PDB Molecule:preprotein translocase seca subunit;
PDBTitle: crystal structure of secb complexed with seca c-terminus
83c1ozbJ_



not modelled 5.2 38
PDB header:protein transport
Chain: J: PDB Molecule:preprotein translocase seca subunit;
PDBTitle: crystal structure of secb complexed with seca c-terminus
84d1iarb1



not modelled 5.1 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
85c4g6zA_



not modelled 5.1 25
PDB header:ligase
Chain: A: PDB Molecule:glutamate-trna ligase;
PDBTitle: crystal structure of a glutamyl-trna synthetase glurs from2 burkholderia thailandensis bound to l-glutamate
86c4kp4B_



not modelled 5.1 30
PDB header:transferase/signaling protein
Chain: B: PDB Molecule:osmolarity sensor protein envz, histidine kinase;
PDBTitle: deciphering cis-trans directionality and visualizing2 autophosphorylation in histidine kinases.

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