Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0188_(-)_219484_219915
DateTue Jul 23 14:50:24 BST 2019
Unique Job ID31da74e445ce9e5c
SequenceMSTVHSSIDQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.642 Y:14.692 Z:25.060
Model (left) based on template d1qgia_
Top template information
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Chitosanase
Confidence and coverage
Confidence: 26.0% Coverage: 15%
22 residues ( 15% of your sequence) have been modelled with 26.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1qgia_



26.0 41
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Chitosanase
2c3kltB_



18.8 16
PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment
3c2yy0D_



18.0 14
PDB header:transcription
Chain: D: PDB Molecule:c-myc-binding protein;
PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens
4c6iu3A_



16.5 11
PDB header:metal transport
Chain: A: PDB Molecule:vit1;
PDBTitle: crystal structure of iron transporter vit1 with zinc ions
5c2ks1B_



12.6 20
PDB header:transferase
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
6d2imha1



12.5 33
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:SPO2555-like
7c4b1yM_



9.7 31
PDB header:structural protein
Chain: M: PDB Molecule:phosphatase and actin regulator 1;
PDBTitle: structure of the phactr1 rpel-3 bound to g-actin
8c2kmuA_



9.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent dna helicase q4;
PDBTitle: recql4 amino-terminal domain
9c4ph6A_



9.2 9
PDB header:lyase
Chain: A: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: structure of 3-dehydroquinate dehydratase from enterococcus faecalis
10d2imra1



9.1 44
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:DR0824-like
11c5kbhB_



8.4 27
PDB header:transcription
Chain: B: PDB Molecule:mopr;
PDBTitle: crystal structure of the aromatic sensor domain of mopr in complex2 with 3-chloro-phenol
12c3js3C_



8.3 13
PDB header:lyase
Chain: C: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate
13c2yr1B_



7.4 22
PDB header:lyase
Chain: B: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426
14c6b4gG_



7.2 16
PDB header:transport protein
Chain: G: PDB Molecule:nucleoporin gle1;
PDBTitle: crystal structure of chaetomium thermophilum gle1 ctd-nup42 gbm2 complex
15c3l2iB_



7.2 9
PDB header:lyase
Chain: B: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.
16c2mmuA_



7.1 19
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein crga;
PDBTitle: structure of crga, a cell division structural and regulatory protein2 from mycobacterium tuberculosis, in lipid bilayers
17c3odmE_



7.1 46
PDB header:lyase
Chain: E: PDB Molecule:phosphoenolpyruvate carboxylase;
PDBTitle: archaeal-type phosphoenolpyruvate carboxylase
18d1sfla_



6.9 22
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
19c3sjrB_



6.6 29
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
20d2vv5a3



6.5 20
Fold:Mechanosensitive channel protein MscS (YggB), transmembrane region
Superfamily:Mechanosensitive channel protein MscS (YggB), transmembrane region
Family:Mechanosensitive channel protein MscS (YggB), transmembrane region
21c2n2aA_



not modelled 6.3 27
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains
22c4kunB_



not modelled 6.2 0
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein lpp1115;
PDBTitle: crystal structure of legionella pneumophila lpp1115 / kaib
23c5wl0A_



not modelled 5.8 8
PDB header:viral protein/inhibitor
Chain: A: PDB Molecule:polymerase basic protein 2;
PDBTitle: co-crystal structure of influenza a h3n2 pb2 (241-741) bound to vx-787

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below