Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0190_(-)_221869_222159
DateTue Jul 23 14:50:24 BST 2019
Unique Job ID772340ab2de38c3e
SequenceMTAAHGYTQQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.545 Y:33.431 Z:52.202
Model (left) based on template c4adzA_
Top template information
PDB header:transcription
Chain: A: PDB Molecule:csor;
PDBTitle: crystal structure of the apo form of a copper-sensitive operon2 regulator (csor) protein from streptomyces lividans
Confidence and coverage
Confidence:100.0% Coverage: 94%
90 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4adzA_



100.0 58
PDB header:transcription
Chain: A: PDB Molecule:csor;
PDBTitle: crystal structure of the apo form of a copper-sensitive operon2 regulator (csor) protein from streptomyces lividans
2c5lbmD_



100.0 21
PDB header:transcription
Chain: D: PDB Molecule:transcriptional repressor frmr;
PDBTitle: the asymmetric tetrameric structure of the formaldehyde sensing2 transcriptional repressor frmr from escherichia coli
3c4m1pA_



100.0 42
PDB header:transcription repressor
Chain: A: PDB Molecule:copper-sensitive operon repressor (csor);
PDBTitle: crystal structure of the copper-sensing repressor csor with cu(i) from2 geobacillus thermodenitrificans ng80-2
4c5fmnB_



100.0 38
PDB header:dna binding protein
Chain: B: PDB Molecule:inrs;
PDBTitle: the nickel-responsive transcriptional regulator inrs
5c5lcyD_



100.0 23
PDB header:transcription
Chain: D: PDB Molecule:frmr;
PDBTitle: formaldehyde-responsive regulator frmr e64h variant from salmonella2 enterica serovar typhimurium
6c2hh7A_



100.0 39
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein csor;
PDBTitle: crystal structure of cu(i) bound csor from mycobacterium tuberculosis.
7c3aaiB_



99.9 34
PDB header:transcription
Chain: B: PDB Molecule:copper homeostasis operon regulatory protein;
PDBTitle: x-ray crystal structure of csor from thermus thermophilus hb8
8d1paqa_



52.0 8
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
9c1paqA_



52.0 8
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b epsilon
PDBTitle: crystal structure of the catalytic fragment of eukaryotic2 initiation factor 2b epsilon
10c4u8us_



44.9 2
PDB header:oxygen storage/transport
Chain: S: PDB Molecule:globin d chain;
PDBTitle: the crystallographic structure of the giant hemoglobin from2 glossoscolex paulistus at 3.2 a resolution.
11c5frhA_



38.9 9
PDB header:transcription
Chain: A: PDB Molecule:anti-sigma factor rsra;
PDBTitle: solution structure of oxidised rsra
12c4aj5M_



38.2 12
PDB header:cell cycle
Chain: M: PDB Molecule:spindle and kinetochore-associated protein 2;
PDBTitle: crystal structure of the ska core complex
13c2p5tA_



37.7 44
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcriptional regulator peza;
PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae
14c4n6jA_



23.7 11
PDB header:signaling protein
Chain: A: PDB Molecule:striatin-3;
PDBTitle: crystal structure of human striatin-3 coiled coil domain
15c4n6jB_



22.6 13
PDB header:signaling protein
Chain: B: PDB Molecule:striatin-3;
PDBTitle: crystal structure of human striatin-3 coiled coil domain
16c3juiA_



21.4 10
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon;
PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit
17c3fajA_



19.1 9
PDB header:structural protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of the structural protein p131 of the archaeal virus2 acidianus two-tailed virus (atv)
18c4fc9B_



19.0 27
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the c-terminal domain of the type iii effector xcv32202 (xopl)
19c4a1qB_



18.3 16
PDB header:viral protein
Chain: B: PDB Molecule:orf e73;
PDBTitle: solution structure of e73 protein from sulfolobus spindle-2 shaped virus ragged hills, a hyperthermophilic3 crenarchaeal virus from yellowstone national park
20c2nv2U_



17.7 29
PDB header:lyase/transferase
Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
21c3swyB_



not modelled 16.1 32
PDB header:transport protein
Chain: B: PDB Molecule:cyclic nucleotide-gated cation channel alpha-3;
PDBTitle: cnga3 626-672 containing clz domain
22c4yioB_



not modelled 16.1 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:superoxide dismutase;
PDBTitle: x-ray structure of the iron/manganese cambialistic superoxide2 dismutase from streptococcus thermophilus
23c4aaiB_



not modelled 16.1 15
PDB header:viral protein
Chain: B: PDB Molecule:orf e73;
PDBTitle: thermostable protein from hyperthermophilic virus ssv-rh
24c2n5xA_



not modelled 15.1 12
PDB header:chaperone
Chain: A: PDB Molecule:hsp90 co-chaperone cdc37;
PDBTitle: c-terminal domain of cdc37 cochaperone
25c5vf3Z_



not modelled 13.7 38
PDB header:virus
Chain: Z: PDB Molecule:highly immunogenic outer capsid protein;
PDBTitle: bacteriophage t4 isometric capsid
26c2gtlO_



not modelled 12.9 4
PDB header:oxygen storage/transport
Chain: O: PDB Molecule:extracellular hemoglobin linker l3 subunit;
PDBTitle: lumbricus erythrocruorin at 3.5a resolution
27d2igsa1



not modelled 11.6 18
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:PA2222-like
28d1ivsa1



not modelled 11.5 13
Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Valyl-tRNA synthetase (ValRS) C-terminal domain
29c2mhwA_



not modelled 9.3 32
PDB header:antimicrobial protein, membrane protein
Chain: A: PDB Molecule:antimicrobial peptide;
PDBTitle: the solution nmr structure of maximin-4 in sds micelles
30d1sr2a_



not modelled 9.1 8
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Sensor-like histidine kinase YojN, C-terminal domain
31c4n5bF_



not modelled 8.9 23
PDB header:viral protein
Chain: F: PDB Molecule:phosphoprotein;
PDBTitle: crystal structure of the nipah virus phosphoprotein tetramerization2 domain
32c6hxgE_



not modelled 8.4 24
PDB header:plant protein
Chain: E: PDB Molecule:pyridoxal 5'-phosphate synthase-like subunit pdx1.2;
PDBTitle: pdx1.2/pdx1.3 complex (intermediate)
33c2ovcA_



not modelled 8.4 30
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily kqt member 4;
PDBTitle: crystal structure of a coiled-coil tetramerization domain from kv7.42 channels
34d1up7a2



not modelled 8.0 18
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:AglA-like glucosidase
35c3cveC_



not modelled 7.5 22
PDB header:signaling protein
Chain: C: PDB Molecule:homer protein homolog 1;
PDBTitle: crystal structure of the carboxy terminus of homer1
36c3zs9D_



not modelled 7.4 40
PDB header:hydrolase/transport protein
Chain: D: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment
37c3rkgA_



not modelled 7.2 18
PDB header:metal transport
Chain: A: PDB Molecule:magnesium transporter mrs2, mitochondrial;
PDBTitle: structural and functional characterization of the yeast mg2+ channel2 mrs2
38c6hyeF_



not modelled 6.7 21
PDB header:plant protein
Chain: F: PDB Molecule:pyridoxal 5'-phosphate synthase subunit pdx1.3;
PDBTitle: pdx1.2/pdx1.3 complex (pdx1.3:k97a)
39d2a0ba_



not modelled 6.4 12
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Aerobic respiration control sensor protein, ArcB
40c5dolB_



not modelled 6.4 16
PDB header:replication
Chain: B: PDB Molecule:initiation-control protein yaba;
PDBTitle: crystal structure of yaba amino-terminal domain from bacillus subtilis
41c2qycA_



not modelled 6.0 10
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
42c4p3gC_



not modelled 5.7 11
PDB header:rna binding protein
Chain: C: PDB Molecule:signal recognition particle subunit srp68;
PDBTitle: structure of the srp68-rbd from chaetomium thermophilum
43c4zmkA_



not modelled 5.6 30
PDB header:dna binding protein
Chain: A: PDB Molecule:telomere length regulator taz1;
PDBTitle: crystal structure of the dimerization domain of s. pombe taz1
44c5an5J_



not modelled 5.6 38
PDB header:cell cycle
Chain: J: PDB Molecule:cell cycle protein gpsb;
PDBTitle: b. subtilis gpsb c-terminal domain
45c3swfA_



not modelled 5.6 22
PDB header:transport protein
Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1;
PDBTitle: cnga1 621-690 containing clz domain
46c6od2A_



not modelled 5.3 40
PDB header:structural protein
Chain: A: PDB Molecule:spindle pole body component spc42;
PDBTitle: yeast spc42 c-terminal antiparallel coiled-coil
47c3nyiA_



not modelled 5.3 11
PDB header:lipid binding protein
Chain: A: PDB Molecule:fat acid-binding protein;
PDBTitle: the crystal structure of a fat acid (stearic acid)-binding protein2 from eubacterium ventriosum atcc 27560.
48d1wn0a1



not modelled 5.2 11
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Phosphorelay protein-like
49d1ev0a_



not modelled 5.2 17
Fold:Cell division protein MinE topological specificity domain
Superfamily:Cell division protein MinE topological specificity domain
Family:Cell division protein MinE topological specificity domain
50c4hjdB_



not modelled 5.1 33
PDB header:unknown function
Chain: B: PDB Molecule:gcn4pli(alpha/beta/acyclic gamma);
PDBTitle: gcn4pli derivative with alpha/beta/acyclic-gamma amino acid2 substitution pattern
51c4hjdA_



not modelled 5.1 33
PDB header:unknown function
Chain: A: PDB Molecule:gcn4pli(alpha/beta/acyclic gamma);
PDBTitle: gcn4pli derivative with alpha/beta/acyclic-gamma amino acid2 substitution pattern

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