Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0198c_(-)_234516_236507
DateTue Jul 23 14:50:25 BST 2019
Unique Job ID5f5f4f430c0b6dbf
SequenceVTLAIPSGID ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:73.873 Y:63.551 Z:73.853
Model (left) based on template c3zukB_
Top template information
PDB header:hydrolase/inhibitor
Chain: B: PDB Molecule:endopeptidase, peptidase family m13;
PDBTitle: crystal structure of mycobacterium tuberculosis zinc metalloprotease2 zmp1 in complex with inhibitor
Confidence and coverage
Confidence:100.0% Coverage: 99%
657 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3zukB_



100.0 100
PDB header:hydrolase/inhibitor
Chain: B: PDB Molecule:endopeptidase, peptidase family m13;
PDBTitle: crystal structure of mycobacterium tuberculosis zinc metalloprotease2 zmp1 in complex with inhibitor
2d1dmta_



100.0 32
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Neutral endopeptidase (neprilysin)
3c3dwbA_



100.0 31
PDB header:hydrolase
Chain: A: PDB Molecule:endothelin-converting enzyme 1;
PDBTitle: structure of human ece-1 complexed with phosphoramidon
4c4iuwA_



100.0 30
PDB header:hydrolase
Chain: A: PDB Molecule:neutral endopeptidase;
PDBTitle: crystal structure of pepo from lactobacillus rhamnosis hn001 (dr20)
5d1bswa_



83.2 22
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
6d1wnia_



82.1 19
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
7c3k7lA_



82.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:atragin;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
8c2dw1B_



67.2 16
PDB header:apoptosis, toxin
Chain: B: PDB Molecule:catrocollastatin;
PDBTitle: crystal structure of vap2 from crotalus atrox venom (form 2-2 crystal)
9d1r55a_



66.0 42
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
10d1atla_



66.0 32
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
11c1yp1A_



64.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:fii;
PDBTitle: crystal structure of a non-hemorrhagic fibrin(ogen)olytic2 metalloproteinase from venom of agkistrodon acutus
12d1nd1a_



64.9 28
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
13d1kufa_



62.5 20
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
14c4dd8B_



59.3 31
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam-8 metalloproteinase domain with bound batimastat
15c6be6D_



57.9 23
PDB header:membrane protein
Chain: D: PDB Molecule:disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam10 extracellular domain
16d4aiga_



57.3 28
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
17c3cqbB_



55.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:probable protease htpx homolog;
PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
18d2i47a1



55.8 44
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:TNF-alpha converting enzyme, TACE, catalytic domain
19c3k7nA_



54.5 20
PDB header:hydrolase
Chain: A: PDB Molecule:k-like;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
20c2e3xA_



54.0 14
PDB header:hydrolase, blood clotting, toxin
Chain: A: PDB Molecule:coagulation factor x-activating enzyme heavy chain;
PDBTitle: crystal structure of russell's viper venom metalloproteinase
21c2i47A_



not modelled 52.9 44
PDB header:hydrolase
Chain: A: PDB Molecule:adam 17;
PDBTitle: crystal structure of catalytic domain of tace with inhibitor
22c3nqzB_



not modelled 52.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:secreted metalloprotease mcp02;
PDBTitle: crystal structure of the autoprocessed vibriolysin mcp-02 with e369a2 mutation
23c3nqxA_



not modelled 48.7 26
PDB header:hydrolase
Chain: A: PDB Molecule:secreted metalloprotease mcp02;
PDBTitle: crystal structure of vibriolysin mcp-02 mature enzyme, a zinc2 metalloprotease from m4 family
24c2erpA_



not modelled 43.8 13
PDB header:toxin
Chain: A: PDB Molecule:vascular apoptosis-inducing protein 1;
PDBTitle: crystal structure of vascular apoptosis-inducing protein-1(inhibitor-2 bound form)
25c2vqxA_



not modelled 40.7 33
PDB header:hydrolase
Chain: A: PDB Molecule:metalloproteinase;
PDBTitle: precursor of protealysin, metalloproteinase from serratia2 proteamaculans.
26d1quaa_



not modelled 38.9 20
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
27d1u4ga_



not modelled 38.6 26
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
28c3b8zB_



not modelled 37.3 42
PDB header:hydrolase
Chain: B: PDB Molecule:protein adamts-5;
PDBTitle: high resolution crystal structure of the catalytic domain of adamts-52 (aggrecanase-2)
29c2v4bB_



not modelled 36.9 36
PDB header:hydrolase
Chain: B: PDB Molecule:adamts-1;
PDBTitle: crystal structure of human adamts-1 catalytic domain and cysteine-2 rich domain (apo-form)
30d1npca_



not modelled 28.1 60
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
31d1bqba_



not modelled 26.5 54
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
32c4gerB_



not modelled 26.2 60
PDB header:hydrolase
Chain: B: PDB Molecule:gentlyase metalloprotease;
PDBTitle: crystal structure of gentlyase, the neutral metalloprotease of2 paenibacillus polymyxa
33c2rjpC_



not modelled 26.0 29
PDB header:hydrolase
Chain: C: PDB Molecule:adamts-4;
PDBTitle: crystal structure of adamts4 with inhibitor bound
34d1kjpa_



not modelled 25.7 36
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
35c3c37B_



not modelled 23.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase, m48 family;
PDBTitle: x-ray structure of the putative zn-dependent peptidase q74d82 at the2 resolution 1.7 a. northeast structural genomics consortium target3 gsr143a
36c1vzmB_



not modelled 19.4 27
PDB header:calcium-binding protein
Chain: B: PDB Molecule:osteocalcin;
PDBTitle: osteocalcin from fish argyrosomus regius
37c2qr4B_



not modelled 18.1 36
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase m3b, oligoendopeptidase f;
PDBTitle: crystal structure of oligoendopeptidase-f from enterococcus faecium
38c3g5cA_



not modelled 17.2 15
PDB header:membrane protein
Chain: A: PDB Molecule:adam 22;
PDBTitle: structural and biochemical studies on the ectodomain of human adam22
39d1k9xa_



not modelled 16.7 15
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Neurolysin-like
40c5zjlA_



not modelled 15.8 15
PDB header:allergen
Chain: A: PDB Molecule:der f 23 allergen;
PDBTitle: crystal structure of the dust mite allergen der f 23 from2 dermatophagoides farinae
41c4k90A_



not modelled 15.4 33
PDB header:hydrolase
Chain: A: PDB Molecule:extracellular metalloproteinase mep;
PDBTitle: extracellular metalloproteinase from aspergillus
42d1d0gr3



not modelled 14.8 6
Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:TNF receptor-like
43d1mmqa_



not modelled 14.7 31
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
44d1y93a1



not modelled 14.4 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
45d1cxva_



not modelled 14.4 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
46c5tzqD_



not modelled 14.3 15
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-modifying factor;
PDBTitle: crystal structure of fpv039:bmf bh3 complex
47d1xuca1



not modelled 14.1 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
48c3sksA_



not modelled 13.6 55
PDB header:hydrolase
Chain: A: PDB Molecule:putative oligoendopeptidase f;
PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames
49d1i76a_



not modelled 13.4 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
50c2xs4A_



not modelled 13.3 55
PDB header:hydrolase
Chain: A: PDB Molecule:karilysin protease;
PDBTitle: structure of karilysin catalytic mmp domain in complex with magnesium
51c2j83B_



not modelled 13.0 46
PDB header:hydrolase
Chain: B: PDB Molecule:ulilysin;
PDBTitle: ulilysin metalloprotease in complex with batimastat.
52d2g7oa1



not modelled 12.8 13
Fold:TraM-like
Superfamily:TraM-like
Family:TraM-like
53d1tuza_



not modelled 12.6 6
Fold:EF Hand-like
Superfamily:EF-hand
Family:EF-hand modules in multidomain proteins
54c4fcaA_



not modelled 12.5 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: the crystal structure of a functionally unknown conserved protein from2 bacillus anthracis str. ames.
55d1eaka2



not modelled 12.5 23
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
56d2ovxa1



not modelled 12.3 36
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
57d1rh7a_



not modelled 12.0 43
Fold:Resistin
Superfamily:Resistin
Family:Resistin
58c4wwxB_



not modelled 11.9 18
PDB header:hydrolase, ligase
Chain: B: PDB Molecule:v(d)j recombination-activating protein 1;
PDBTitle: crystal structure of the core rag1/2 recombinase
59c5ebzF_



not modelled 11.9 24
PDB header:transferase/transferase inhibitor
Chain: F: PDB Molecule:inhibitor of nuclear factor kappa-b kinase subunit alpha;
PDBTitle: crystal structure of human ikk1
60c5tzqC_



not modelled 11.8 16
PDB header:apoptosis
Chain: C: PDB Molecule:bcl-2-modifying factor;
PDBTitle: crystal structure of fpv039:bmf bh3 complex
61d1bqqm_



not modelled 11.7 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
62c4on1B_



not modelled 11.7 14
PDB header:hydrolase
Chain: B: PDB Molecule:putative metalloprotease ii;
PDBTitle: crystal structure of metalloproteinase-ii from bacteroides fragilis
63c4aw6B_



not modelled 11.6 64
PDB header:hydrolase
Chain: B: PDB Molecule:caax prenyl protease 1 homolog;
PDBTitle: crystal structure of the human nuclear membrane zinc metalloprotease2 zmpste24 (face1)
64d1hova_



not modelled 11.5 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
65c1wgzC_



not modelled 11.4 21
PDB header:hydrolase
Chain: C: PDB Molecule:carboxypeptidase 1;
PDBTitle: crystal structure of carboxypeptidase 1 from thermus thermophilus
66c5xknE_



not modelled 11.3 23
PDB header:transferase/signaling protein
Chain: E: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
67c5xknF_



not modelled 11.3 23
PDB header:transferase/signaling protein
Chain: F: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
68c1rgxC_



not modelled 11.2 43
PDB header:hormone/growth factor
Chain: C: PDB Molecule:resistin;
PDBTitle: crystal structure of resisitin
69c3s2xB_



not modelled 11.0 15
PDB header:transferase
Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha;
PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain
70d1dlca3



not modelled 11.0 19
Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
71c3t76A_



not modelled 10.8 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator vanug;
PDBTitle: crystal structure of transcriptional regulator vanug, form ii
72d1qiba_



not modelled 10.8 38
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
73c2jsdA_



not modelled 10.8 38
PDB header:hydrolase
Chain: A: PDB Molecule:matrix metalloproteinase-20;
PDBTitle: solution structure of mmp20 complexed with nngh
74c6aitD_



not modelled 10.7 14
PDB header:hydrolase
Chain: D: PDB Molecule:beta-barrel assembly-enhancing protease;
PDBTitle: crystal structure of e. coli bepa
75d1hfca_



not modelled 10.5 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
76c3p24C_



not modelled 10.5 29
PDB header:hydrolase
Chain: C: PDB Molecule:bft-3;
PDBTitle: structure of profragilysin-3 from bacteroides fragilis
77d1cgla_



not modelled 10.4 38
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
78c3ce2A_



not modelled 10.4 55
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative peptidase;
PDBTitle: crystal structure of putative peptidase from chlamydophila abortus
79d1hv5a_



not modelled 10.3 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
80c2h1jA_



not modelled 10.3 55
PDB header:hydrolase
Chain: A: PDB Molecule:oligoendopeptidase f;
PDBTitle: 3.1 a x-ray structure of putative oligoendopeptidase f: crystals grown2 by microfluidic seeding
81d1hy7a_



not modelled 10.2 55
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
82d1rm8a_



not modelled 10.2 38
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
83c5zihA_



not modelled 10.1 20
PDB header:membrane protein
Chain: A: PDB Molecule:sensory opsin a,chrimson;
PDBTitle: crystal structure of the red light-activated channelrhodopsin2 chrimson.
84d1fbla2



not modelled 10.1 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
85c2k3jA_



not modelled 10.1 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:mitochondrial intermembrane space import and
PDBTitle: the solution structure of human mia40
86c3dtkA_



not modelled 10.0 27
PDB header:gene regulation
Chain: A: PDB Molecule:irre protein;
PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae
87d1q3aa_



not modelled 9.7 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
88c2rjqA_



not modelled 9.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:adamts-5;
PDBTitle: crystal structure of adamts5 with inhibitor bound
89c4il3B_



not modelled 9.4 67
PDB header:hydrolase
Chain: B: PDB Molecule:ste24p;
PDBTitle: crystal structure of s. mikatae ste24p
90d1sata2



not modelled 9.3 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
91c5sujB_



not modelled 9.2 14
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein lpg2148 from legionella2 pneumophila
92d1rfxa_



not modelled 9.0 43
Fold:Resistin
Superfamily:Resistin
Family:Resistin
93d1g9ka2



not modelled 8.9 45
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
94c1dlcA_



not modelled 8.8 19
PDB header:toxin
Chain: A: PDB Molecule:delta-endotoxin cryiiia;
PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution
95c1fwoA_



not modelled 8.6 14
PDB header:hydrolase
Chain: A: PDB Molecule:oryzain beta chain;
PDBTitle: the solution structure of a 35-residue fragment from the2 granulin/epithelin-like subdomain of rice oryzain beta3 (rob 382-416 (c398s,c399s,c407s,c413s))
96c2vogB_



not modelled 8.5 16
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-modifying factor;
PDBTitle: structure of mouse a1 bound to the bmf bh3-domain
97c6etxR_



not modelled 8.4 7
PDB header:dna binding protein
Chain: R: PDB Molecule:ino80 complex subunit b;
PDBTitle: cryo-em structure of the human ino80 complex bound to nucleosome
98c6mdxA_



not modelled 8.2 30
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:sprt-like domain-containing protein spartan;
PDBTitle: mechanism of protease dependent dpc repair
99c5th6D_



not modelled 8.2 38
PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:matrix metalloproteinase-9,matrix metalloproteinase-9;
PDBTitle: structure determination of a potent, selective antibody inhibitor of2 human mmp9 (apo mmp9)

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Transmembrane helix prediction 

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