1 c1y9qA_
95.8
22
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator, hth_3 family;
PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
2 c2xcjB_
95.3
25
PDB header: viral proteinChain: B: PDB Molecule: c protein;
PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2
3 c3trbA_
94.5
20
PDB header: dna binding proteinChain: A: PDB Molecule: virulence-associated protein i;
PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii
4 c3cecA_
94.4
22
PDB header: transcriptionChain: A: PDB Molecule: putative antidote protein of plasmid maintenance system;
PDBTitle: crystal structure of a putative antidote protein of plasmid2 maintenance system (npun_f2943) from nostoc punctiforme pcc 73102 at3 1.60 a resolution
5 c4mcxE_
94.4
27
PDB header: toxinChain: E: PDB Molecule: antidote protein;
PDBTitle: p. vulgaris higba structure, crystal form 2
6 c6f8sA_
94.1
18
PDB header: toxinChain: A: PDB Molecule: xre family transcriptional regulator;
PDBTitle: toxin-antitoxin complex grata
7 d1y9qa1
94.0
22
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Probable transcriptional regulator VC1968, N-terminal domain
8 d1x57a1
93.5
21
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: EDF1-like
9 d1adra_
93.4
6
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
10 c3vk0B_
93.2
20
PDB header: dna binding proteinChain: B: PDB Molecule: transcriptional regulator;
PDBTitle: crystal structure of hypothetical transcription factor nhtf from2 neisseria
11 c3dnvB_
93.1
14
PDB header: transcription/dnaChain: B: PDB Molecule: hth-type transcriptional regulator hipb;
PDBTitle: mdt protein
12 c6b9rD_
93.1
16
PDB header: oxidoreductaseChain: D: PDB Molecule: hydroxyethylphosphonate dioxygenase;
PDBTitle: streptomyces albus hepd with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
13 c2o38A_
93.0
16
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein;
PDBTitle: putative xre family transcriptional regulator
14 d2o38a1
93.0
16
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: NE1354
15 c5j9iH_
92.9
12
PDB header: antitoxinChain: H: PDB Molecule: antitoxin iga-2;
PDBTitle: crystal structure of the higa2 antitoxin c-terminal domain
16 c2jvlA_
92.8
23
PDB header: transcriptionChain: A: PDB Molecule: trmbf1;
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
17 d1rioa_
92.8
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
18 d1y7ya1
92.3
13
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
19 d2b5aa1
92.3
13
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
20 c2kpjA_
92.3
20
PDB header: transcription regulatorChain: A: PDB Molecule: sos-response transcriptional repressor, lexa;
PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
21 d2icta1
not modelled
91.8
16
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
22 c3clcC_
not modelled
91.6
6
PDB header: transcription regulator/dnaChain: C: PDB Molecule: regulatory protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
23 d2a6ca1
not modelled
91.5
24
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: NE1354
24 c3f52A_
not modelled
91.3
17
PDB header: transcription activatorChain: A: PDB Molecule: clp gene regulator (clgr);
PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum
25 c2ebyA_
not modelled
91.3
16
PDB header: transcriptionChain: A: PDB Molecule: putative hth-type transcriptional regulator ybaq;
PDBTitle: crystal structure of a hypothetical protein from e. coli
26 c3omtA_
not modelled
91.0
11
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae.
27 d2r1jl1
not modelled
90.7
6
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
28 c2ewtA_
not modelled
90.7
11
PDB header: dna binding proteinChain: A: PDB Molecule: putative dna-binding protein;
PDBTitle: crystal structure of the dna-binding domain of bldd
29 c3eusB_
not modelled
90.5
9
PDB header: dna binding proteinChain: B: PDB Molecule: dna-binding protein;
PDBTitle: the crystal structure of the dna binding protein from silicibacter2 pomeroyi
30 c2ppxA_
not modelled
90.2
14
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein atu1735;
PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens
31 d2ppxa1
not modelled
90.2
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
32 c5d50I_
not modelled
90.2
12
PDB header: dna binding proteinChain: I: PDB Molecule: repressor;
PDBTitle: crystal structure of rep-ant complex from salmonella-temperate phage
33 d2ofya1
not modelled
90.0
21
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
34 c3zhiA_
not modelled
89.9
14
PDB header: transcriptionChain: A: PDB Molecule: ci;
PDBTitle: n-terminal domain of the ci repressor from bacteriophage tp901-1
35 d1b0na2
not modelled
89.8
16
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
36 c3f6wE_
not modelled
89.7
10
PDB header: dna binding proteinChain: E: PDB Molecule: xre-family like protein;
PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
37 d1utxa_
not modelled
89.6
18
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: SinR domain-like
38 c2mezA_
not modelled
89.5
14
PDB header: rna binding proteinChain: A: PDB Molecule: multiprotein bridging factor (mbp-like);
PDBTitle: flexible anchoring of archaeal mbf1 on ribosomes suggests role as2 recruitment factor
39 c5woqA_
not modelled
89.1
15
PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator clgr;
PDBTitle: crystal structure of an xre family protein transcriptional regulator2 from mycobacterium smegmatis
40 c3bs3A_
not modelled
88.9
13
PDB header: dna binding proteinChain: A: PDB Molecule: putative dna-binding protein;
PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
41 c5jaaB_
not modelled
88.6
12
PDB header: toxinChain: B: PDB Molecule: antitoxin iga-2;
PDBTitle: crystal structure of the higba2 toxin-antitoxin complex
42 c3bdnB_
not modelled
88.6
17
PDB header: transcription/dnaChain: B: PDB Molecule: lambda repressor;
PDBTitle: crystal structure of the lambda repressor
43 c5d4zF_
not modelled
88.5
10
PDB header: dna binding proteinChain: F: PDB Molecule: repressor;
PDBTitle: crystal structure of repressor from salmonella-temperate phage
44 c3fmyA_
not modelled
88.0
18
PDB header: dna binding proteinChain: A: PDB Molecule: hth-type transcriptional regulator mqsa
PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
45 d1lmb3_
not modelled
87.1
15
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
46 c1b0nA_
not modelled
86.0
17
PDB header: transcription regulatorChain: A: PDB Molecule: protein (sinr protein);
PDBTitle: sinr protein/sini protein complex
47 d1sq8a_
not modelled
86.0
17
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
48 c3op9A_
not modelled
85.7
21
PDB header: transcription regulatorChain: A: PDB Molecule: pli0006 protein;
PDBTitle: crystal structure of transcriptional regulator from listeria innocua
49 c3b7hA_
not modelled
84.0
17
PDB header: structural proteinChain: A: PDB Molecule: prophage lp1 protein 11;
PDBTitle: crystal structure of the prophage lp1 protein 11
50 c3gn5B_
not modelled
84.0
20
PDB header: dna binding proteinChain: B: PDB Molecule: hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
51 c2mqkA_
not modelled
83.8
8
PDB header: hydrolaseChain: A: PDB Molecule: atp-dependent target dna activator b;
PDBTitle: solution structure of n terminal domain of the mub aaa+ atpase
52 c3pxpA_
not modelled
83.6
20
PDB header: transcription regulatorChain: A: PDB Molecule: helix-turn-helix domain protein;
PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution
53 c5uk3J_
not modelled
83.4
24
PDB header: lyaseChain: J: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of cyanase from t. urticae
54 d1r69a_
not modelled
83.0
19
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
55 c4pu4C_
not modelled
82.8
16
PDB header: toxin/antitoxin/dnaChain: C: PDB Molecule: toxin-antitoxin system antidote transcriptional repressor
PDBTitle: shewanella oneidensis mr-1 toxin antitoxin system hipa, hipb and its2 operator dna complex (space group p21)
56 c3kxaD_
not modelled
82.7
16
PDB header: structural genomics, unknown functionChain: D: PDB Molecule: putative uncharacterized protein;
PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae
57 c4ybaA_
not modelled
82.7
11
PDB header: gene regulationChain: A: PDB Molecule: regulatory protein c;
PDBTitle: the structure of the c.kpn2i controller protein
58 c2bnoA_
not modelled
81.7
16
PDB header: oxidoreductaseChain: A: PDB Molecule: epoxidase;
PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase from s.2 wedmorenis.
59 c3ivpD_
not modelled
81.2
17
PDB header: dna binding proteinChain: D: PDB Molecule: putative transposon-related dna-binding protein;
PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
60 c3mlfC_
not modelled
79.7
15
PDB header: transcription regulatorChain: C: PDB Molecule: transcriptional regulator;
PDBTitle: putative transcriptional regulator from staphylococcus aureus.
61 c6b9tH_
not modelled
79.2
15
PDB header: oxidoreductaseChain: H: PDB Molecule: methylphosphonate synthase;
PDBTitle: crystal structure of mpns with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
62 d2croa_
not modelled
78.7
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
63 c4ghjA_
not modelled
78.6
17
PDB header: transcriptionChain: A: PDB Molecule: probable transcriptional regulator;
PDBTitle: 1.75 angstrom crystal structure of transcriptional regulator ftom2 vibrio vulnificus.
64 d1llib_
not modelled
78.2
22
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Phage repressors
65 c3lisB_
not modelled
78.0
21
PDB header: transcriptionChain: B: PDB Molecule: csp231i c protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form)
66 c6fkgC_
not modelled
76.7
19
PDB header: toxinChain: C: PDB Molecule: rv1990c (mbca);
PDBTitle: crystal structure of the m.tuberculosis mbct-mbca toxin-antitoxin2 complex.
67 c2ef8A_
not modelled
72.8
15
PDB header: transcription regulatorChain: A: PDB Molecule: putative transcription factor;
PDBTitle: crystal structure of c.ecot38is
68 c5j2yA_
not modelled
72.5
17
PDB header: gene regulation/dnaChain: A: PDB Molecule: regulatory protein;
PDBTitle: molecular insight into the regulatory mechanism of the quorum-sensing2 repressor rsal in pseudomonas aeruginosa
69 c4o8bA_
not modelled
69.8
12
PDB header: dna binding proteinChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of transcriptional regulator bswr
70 c3t76A_
not modelled
68.1
13
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator vanug;
PDBTitle: crystal structure of transcriptional regulator vanug, form ii
71 c2fjrB_
not modelled
63.3
9
PDB header: transcription regulatorChain: B: PDB Molecule: repressor protein ci;
PDBTitle: crystal structure of bacteriophage 186
72 c4d10H_
not modelled
59.8
17
PDB header: signaling proteinChain: H: PDB Molecule: cop9 signalosome complex subunit 8;
PDBTitle: crystal structure of the cop9 signalosome
73 d1zs4a1
not modelled
49.0
25
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: Bacteriophage CII protein
74 c3qyxD_
not modelled
45.5
28
PDB header: transcription/dnaChain: D: PDB Molecule: esx-1 secretion-associated regulator espr;
PDBTitle: crystal structure of mycobacterium tuberculosis espr in complex with a2 small dna fragment
75 c2ebiA_
not modelled
38.2
10
PDB header: dna binding proteinChain: A: PDB Molecule: dna binding protein gt-1;
PDBTitle: arabidopsis gt-1 dna-binding domain with t133d phosphomimetic mutation
76 c2ksnA_
not modelled
37.2
38
PDB header: signaling proteinChain: A: PDB Molecule: ubiquitin domain-containing protein 2;
PDBTitle: solution structure of the n-terminal domain of dc-ubp/ubtd2
77 c4itqA_
not modelled
31.3
17
PDB header: gene regulation, structural protein/dnaChain: A: PDB Molecule: putative uncharacterized protein sco1480;
PDBTitle: crystal structure of hypothetical protein sco1480 bound to dna
78 d1x41a1
not modelled
24.5
22
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Homeodomain
79 c2vgeA_
not modelled
20.9
26
PDB header: transcriptionChain: A: PDB Molecule: rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
80 d2a0ba_
not modelled
20.6
17
Fold: Four-helical up-and-down bundleSuperfamily: Histidine-containing phosphotransfer domain, HPT domainFamily: Aerobic respiration control sensor protein, ArcB
81 c2elkA_
not modelled
20.5
22
PDB header: transcriptionChain: A: PDB Molecule: spcc24b10.08c protein;
PDBTitle: solution structure of the sant domain of fission yeast2 spcc24b10.08c protein
82 c2hu9B_
not modelled
20.3
24
PDB header: metal transportChain: B: PDB Molecule: mercuric transport protein periplasmic component;
PDBTitle: x-ray structure of the archaeoglobus fulgidus copz n-2 terminal domain
83 d2cqqa1
not modelled
20.1
47
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Myb/SANT domain
84 c2kwhA_
not modelled
19.9
78
PDB header: transport proteinChain: A: PDB Molecule: rala-binding protein 1;
PDBTitle: ral binding domain of rlip76 (ralbp1)
85 c3myfB_
not modelled
19.5
32
PDB header: transferaseChain: B: PDB Molecule: sensor protein;
PDBTitle: the crystal structure of the hpt domain from the hpt sensor hybrid2 histidine kinase from shewanella to 1.80a
86 c2ym0B_
not modelled
19.2
16
PDB header: cell invasionChain: B: PDB Molecule: cell invasion protein sipd;
PDBTitle: truncated sipd from salmonella typhimurium
87 c3iqtA_
not modelled
17.3
12
PDB header: transferaseChain: A: PDB Molecule: signal transduction histidine-protein kinase bara;
PDBTitle: structure of the hpt domain of sensor protein bara from escherichia2 coli cft073.
88 c3nzzA_
not modelled
16.6
16
PDB header: cell invasionChain: A: PDB Molecule: cell invasion protein sipd;
PDBTitle: crystal structure of the salmonella type iii secretion system tip2 protein sipd
89 c1zgwA_
not modelled
16.1
9
PDB header: transcription regulator/dnaChain: A: PDB Molecule: ada polyprotein;
PDBTitle: nmr structure of e. coli ada protein in complex with dna
90 d1sr2a_
not modelled
16.0
17
Fold: Four-helical up-and-down bundleSuperfamily: Histidine-containing phosphotransfer domain, HPT domainFamily: Sensor-like histidine kinase YojN, C-terminal domain
91 c1x41A_
not modelled
15.5
20
PDB header: transcriptionChain: A: PDB Molecule: transcriptional adaptor 2-like, isoform b;
PDBTitle: solution structure of the myb-like dna binding domain of2 human transcriptional adaptor 2-like, isoform b
92 d2gnxa2
not modelled
15.2
32
Fold: Gelsolin-likeSuperfamily: FLJ32549 C-terminal domain-likeFamily: FLJ32549 C-terminal domain-like
93 c3l32B_
not modelled
14.3
28
PDB header: viral proteinChain: B: PDB Molecule: phosphoprotein;
PDBTitle: structure of the dimerisation domain of the rabies virus2 phosphoprotein
94 c4zp0A_
not modelled
13.6
14
PDB header: transport proteinChain: A: PDB Molecule: multidrug transporter mdfa;
PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate
95 c4eefI_
not modelled
12.3
33
PDB header: immune system/inhibitorChain: I: PDB Molecule: f-hb80.4, designed hemagglutinin binding protein;
PDBTitle: crystal structure of the designed inhibitor protein f-hb80.4 in2 complex with the 1918 influenza virus hemagglutinin.
96 d1wn0a1
not modelled
11.7
17
Fold: Four-helical up-and-down bundleSuperfamily: Histidine-containing phosphotransfer domain, HPT domainFamily: Phosphorelay protein-like
97 c3hugJ_
not modelled
11.5
22
PDB header: transcription/membrane proteinChain: J: PDB Molecule: probable conserved membrane protein;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
98 c2mpnA_
not modelled
11.3
20
PDB header: membrane proteinChain: A: PDB Molecule: inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
99 c2mpnB_
not modelled
11.3
20
PDB header: membrane proteinChain: B: PDB Molecule: inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli