Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0203_(-)_241514_241924
DateTue Jul 23 14:50:26 BST 2019
Unique Job ID4786db5e1290b5ff
SequenceMKTGTATTRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.959 Y:31.317 Z:41.044
Model (left) based on template c3mayE_
Top template information
PDB header:heme-binding protein
Chain: E: PDB Molecule:possible exported protein;
PDBTitle: crystal structure of a secreted mycobacterium tuberculosis heme-2 binding protein
Confidence and coverage
Confidence:100.0% Coverage: 69%
94 residues ( 69% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3mayE_



100.0 100
PDB header:heme-binding protein
Chain: E: PDB Molecule:possible exported protein;
PDBTitle: crystal structure of a secreted mycobacterium tuberculosis heme-2 binding protein
2d1mo6a2



55.0 14
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
3d1ubea2



53.6 14
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
4d1xp8a2



53.3 9
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
5d1u94a2



53.1 23
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
6c3qc7A_



40.2 20
PDB header:viral protein
Chain: A: PDB Molecule:head fiber protein;
PDBTitle: the structure of bacteriophage phi29 head fibers has a supercoiled2 triple repeating helix-turn-helix motif
7c2llwA_



32.4 26
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein sti1;
PDBTitle: solution structure of the yeast sti1 dp2 domain
8c3l6gA_



31.2 22
PDB header:glycine betaine-binding protein
Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding
PDBTitle: crystal structure of lactococcal opuac in its open conformation
9c3eywA_



29.3 22
PDB header:transport protein
Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
10c2yy0D_



29.1 21
PDB header:transcription
Chain: D: PDB Molecule:c-myc-binding protein;
PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens
11c4w66A_



24.5 17
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase domain protein;
PDBTitle: crystal structure of glutathione s-transferase domain protein from2 haliangium ochraceum dsm 14365
12d1m0ua1



23.4 33
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
13d2pnwa1



23.1 11
Fold:Double psi beta-barrel
Superfamily:Barwin-like endoglucanases
Family:MLTA-like
14d2g5da1



21.6 26
Fold:Double psi beta-barrel
Superfamily:Barwin-like endoglucanases
Family:MLTA-like
15c3g36D_



21.5 12
PDB header:nuclear protein
Chain: D: PDB Molecule:protein dpy-30 homolog;
PDBTitle: crystal structure of the human dpy-30-like c-terminal domain
16d1gr0a1



21.0 28
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
17c6chgE_



20.7 13
PDB header:transferase
Chain: E: PDB Molecule:klla0e03521p;
PDBTitle: crystal structure of the yeast compass catalytic module
18c3vptA_



19.8 28
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase sigma;
PDBTitle: crystal structure of bombyx mori sigma-class glutathione transferase2 in apo form
19d1tw9a1



19.3 23
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
20c4uiqA_



19.2 17
PDB header:transferase
Chain: A: PDB Molecule:globin-coupled sensor with diguanylate cyclase activity;
PDBTitle: isolated globin domain of the bordetella pertussis globin-2 coupled sensor with a heme at the dimer interface
21c2k7hA_



not modelled 18.4 35
PDB header:allergen
Chain: A: PDB Molecule:stress-induced protein sam22;
PDBTitle: nmr solution structure of soybean allergen gly m 4
22c2x7pA_



not modelled 18.3 9
PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
23c3tl4X_



not modelled 18.2 10
PDB header:ligase
Chain: X: PDB Molecule:glutaminyl-trna synthetase;
PDBTitle: crystal structure of the trna binding domain of glutaminyl-trna2 synthetase from saccharomyces cerevisiae
24c6bx3N_



not modelled 14.2 21
PDB header:gene regulation/transferase
Chain: N: PDB Molecule:compass component sdc1;
PDBTitle: structure of histone h3k4 methyltransferase
25d1okta1



not modelled 14.2 10
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
26c4r7qA_



not modelled 14.0 17
PDB header:signaling protein
Chain: A: PDB Molecule:sensor histidine kinase;
PDBTitle: the structure of a sensor domain of a histidine kinase from vibrio2 cholerae o1 biovar eltor str. n16961
27c2wlvA_



not modelled 13.2 15
PDB header:viral protein
Chain: A: PDB Molecule:gag polyprotein;
PDBTitle: structure of the n-terminal capsid domain of hiv-2
28d1r9la_



not modelled 13.0 10
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
29c2hnlB_



not modelled 11.9 12
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase 1;
PDBTitle: structure of the prostaglandin d synthase from the parasitic nematode2 onchocerca volvulus
30c2mqkA_



not modelled 11.9 9
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent target dna activator b;
PDBTitle: solution structure of n terminal domain of the mub aaa+ atpase
31c4kvuC_



not modelled 11.6 31
PDB header:de novo protein
Chain: C: PDB Molecule:6-helix coiled coil cc-hex-l17c-w224bf;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l17c-w224bf
32c5h5lA_



not modelled 11.5 25
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase s2;
PDBTitle: structure of prostaglandin synthase d of nilaparvata lugens
33d1hsta_



not modelled 11.2 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
34d1yqaa1



not modelled 11.1 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
35c2gsqA_



not modelled 10.7 16
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase;
PDBTitle: glutathione s-transferase from squid digestive gland complexed with s-2 (3-iodobenzyl)glutathione
36c4kvuA_



not modelled 10.5 31
PDB header:de novo protein
Chain: A: PDB Molecule:6-helix coiled coil cc-hex-l17c-w224bf;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l17c-w224bf
37c4kvuB_



not modelled 10.4 31
PDB header:de novo protein
Chain: B: PDB Molecule:6-helix coiled coil cc-hex-l17c-w224bf;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l17c-w224bf
38c2q2kB_



not modelled 10.4 13
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: structure of nucleic-acid binding protein
39d1pd211



not modelled 10.3 20
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
40c4h67D_



not modelled 10.2 17
PDB header:transferase
Chain: D: PDB Molecule:pyrimidine precursor biosynthesis enzyme thi5;
PDBTitle: crystal structure of hmp synthase thi5 from s. cerevisiae
41d1or4a_



not modelled 10.2 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
42d1kija1



not modelled 10.0 26
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
43d1su3a1



not modelled 9.9 43
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
44c1gr0A_



not modelled 9.8 21
PDB header:isomerase
Chain: A: PDB Molecule:inositol-3-phosphate synthase;
PDBTitle: myo-inositol 1-phosphate synthase from mycobacterium2 tuberculosis in complex with nad and zinc.
45c6gq9A_



not modelled 9.8 14
PDB header:allergen
Chain: A: PDB Molecule:major allergen cor a 1.0401;
PDBTitle: solution structure of the hazel allergen cor a 1.0401
46d1xdfa1



not modelled 9.7 29
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
47c3czbA_



not modelled 9.7 6
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transglycosylase;
PDBTitle: crystal structure of putative transglycosylase from caulobacter2 crescentus
48c4ps2A_



not modelled 9.6 25
PDB header:contractile protein
Chain: A: PDB Molecule:putative type vi secretion protein;
PDBTitle: structure of the c-terminal fragment (87-165) of e.coli eaec tssb2 molecule
49c2k5jB_



not modelled 9.4 0
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein yiif;
PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
50d1f3ba1



not modelled 9.4 14
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
51c1iyiA_



not modelled 9.4 24
PDB header:isomerase
Chain: A: PDB Molecule:hematopoietic prostaglandin d synthase;
PDBTitle: crystal structure of hematopoietic prostaglandin d synthase
52c5wd9A_



not modelled 9.3 14
PDB header:protein binding
Chain: A: PDB Molecule:lem22;
PDBTitle: crystal structure of legionella pneumophila effector lpg2328
53d1ml6a1



not modelled 9.2 14
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
54d1slma1



not modelled 9.1 43
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
55c3g80B_



not modelled 8.9 30
PDB header:viral protein
Chain: B: PDB Molecule:protein b2;
PDBTitle: nodamura virus protein b2, rna-binding domain
56c2lnbA_



not modelled 8.6 35
PDB header:immune system
Chain: A: PDB Molecule:z-dna-binding protein 1;
PDBTitle: solution nmr structure of n-terminal domain (6-74) of human zbp12 protein, northeast structural genomics consortium target hr8174a.
57c2de4B_



not modelled 8.4 14
PDB header:hydrolase
Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b;
PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
58d1ussa_



not modelled 8.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
59c2lnmA_



not modelled 8.2 11
PDB header:protein transport
Chain: A: PDB Molecule:protein tic 40, chloroplastic;
PDBTitle: solution structure of the c-terminal np-repeat domain of tic40, a co-2 chaperone during protein import into chloroplasts
60c2rqpA_



not modelled 8.1 13
PDB header:gene regulation
Chain: A: PDB Molecule:heterochromatin protein 1-binding protein 3;
PDBTitle: the solution structure of heterochromatin protein 1-binding2 protein 74 histone h1 like domain
61c2q2kA_



not modelled 8.1 13
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: structure of nucleic-acid binding protein
62d1gpqa_



not modelled 8.0 25
Fold:Inhibitor of vertebrate lysozyme, Ivy
Superfamily:Inhibitor of vertebrate lysozyme, Ivy
Family:Inhibitor of vertebrate lysozyme, Ivy
63d1l6ja1



not modelled 7.9 43
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
64c6n39A_



not modelled 7.8 15
PDB header:transferase
Chain: A: PDB Molecule:dephospho-coa kinase;
PDBTitle: crystal structure of an dephospho-coa kinase coae from mycobacterium2 paratuberculosis
65d1eaka1



not modelled 7.8 43
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
66d1hyoa1



not modelled 7.8 23
Fold:SH3-like barrel
Superfamily:Fumarylacetoacetate hydrolase, FAH, N-terminal domain
Family:Fumarylacetoacetate hydrolase, FAH, N-terminal domain
67d1icxa_



not modelled 7.6 24
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
68d2eiaa2



not modelled 7.5 8
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
69c2rejA_



not modelled 7.3 17
PDB header:choline-binding protein
Chain: A: PDB Molecule:putative glycine betaine abc transporter protein;
PDBTitle: abc-transporter choline binding protein in unliganded semi-2 closed conformation
70d1s16a1



not modelled 7.2 16
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
71d1m9dc_



not modelled 7.2 21
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
72d1b8xa1



not modelled 7.1 11
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
73d1v4aa2



not modelled 7.1 16
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:GlnE-like domain
74d1m9fd_



not modelled 6.8 19
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
75d1e09a_



not modelled 6.7 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
76d2gsqa1



not modelled 6.7 21
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
77d2cvda1



not modelled 6.7 24
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
78c6iuiC_



not modelled 6.6 29
PDB header:protein binding
Chain: C: PDB Molecule:paxillin;
PDBTitle: crystal structure of git1 pbd domain in complex with paxillin ld42 motif
79c6iuiD_



not modelled 6.5 29
PDB header:protein binding
Chain: D: PDB Molecule:paxillin;
PDBTitle: crystal structure of git1 pbd domain in complex with paxillin ld42 motif
80c2pijB_



not modelled 6.5 20
PDB header:transcription
Chain: B: PDB Molecule:prophage pfl 6 cro;
PDBTitle: structure of the cro protein from prophage pfl 6 in pseudomonas2 fluorescens pf-5
81d2pxrc1



not modelled 6.4 21
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
82c5x90B_



not modelled 6.4 29
PDB header:protein transport
Chain: B: PDB Molecule:icmw;
PDBTitle: structure of dotl(656-783)-icms-icmw-lvga derived from legionella2 pneumophila
83d1ei1a1



not modelled 6.4 16
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
84c2ws2B_



not modelled 6.3 34
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase;
PDBTitle: the 2 angstrom structure of a nu-class gst from haemonchus contortus
85d1k3ya1



not modelled 6.2 16
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
86c5i6hA_



not modelled 6.2 14
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase-like protein;
PDBTitle: crystal structure of cd-ct domains of chaetomium thermophilum acetyl-2 coa carboxylase
87c1m0uB_



not modelled 6.1 34
PDB header:transferase
Chain: B: PDB Molecule:gst2 gene product;
PDBTitle: crystal structure of the drosophila glutathione s-transferase-2 in2 complex with glutathione
88c4esxA_



not modelled 6.1 11
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine biosynthesis enzyme thi13;
PDBTitle: crystal structure of c. albicans thi5 complexed with plp
89c1l6nA_



not modelled 6.1 28
PDB header:viral protein
Chain: A: PDB Molecule:gag polyprotein;
PDBTitle: structure of the n-terminal 283-residue fragment of the hiv-2 1 gag polyprotein
90c3chgB_



not modelled 5.9 5
PDB header:ligand binding protein
Chain: B: PDB Molecule:glycine betaine-binding protein;
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
91c3f2eA_



not modelled 5.9 19
PDB header:viral protein
Chain: A: PDB Molecule:sirv coat protein;
PDBTitle: crystal structure of yellowstone sirv coat protein c-terminus
92d1wjfa_



not modelled 5.9 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:N-terminal Zn binding domain of HIV integrase
Family:N-terminal Zn binding domain of HIV integrase
93c5i0cA_



not modelled 5.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yjdj;
PDBTitle: crystal structure of predicted acyltransferase yjdj with acyl-coa n-2 acyltransferase domain from escherichia coli str. k-12
94c3jqhA_



not modelled 5.9 32
PDB header:sugar binding protein
Chain: A: PDB Molecule:c-type lectin domain family 4 member m;
PDBTitle: structure of the neck region of the glycan-binding receptor dc-signr
95d1ixsa_



not modelled 5.8 19
Fold:RuvA C-terminal domain-like
Superfamily:DNA helicase RuvA subunit, C-terminal domain
Family:DNA helicase RuvA subunit, C-terminal domain
96d1r5aa1



not modelled 5.8 15
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
97d1wiwa_



not modelled 5.6 10
Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
98c3tmgA_



not modelled 5.6 8
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter,
PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi
99c4deyB_



not modelled 5.4 18
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent l-type calcium channel subunit alpha-1c;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav1.2 i-ii linker.

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below