Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0210_(-)_250120_251598
DateTue Jul 23 14:50:26 BST 2019
Unique Job ID59ee5e4f22bb4ad4
SequenceVIRAASDDPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:99.244 Y:69.006 Z:65.810
Model (left) based on template c2j69D_
Top template information
PDB header:hydrolase
Chain: D: PDB Molecule:bacterial dynamin-like protein;
PDBTitle: bacterial dynamin-like protein bdlp
Confidence and coverage
Confidence: 99.9% Coverage: 91%
446 residues ( 91% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2j69D_
99.9 13
PDB header:hydrolase
Chain: D: PDB Molecule:bacterial dynamin-like protein;
PDBTitle: bacterial dynamin-like protein bdlp
2c4aurA_
99.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:leoa;
PDBTitle: leoa bacterial dynamin gtpase from etec
3c5oxfB_
99.6 10
PDB header:lipid binding protein
Chain: B: PDB Molecule:gtp-binding protein;
PDBTitle: an oligomerised bacterial dynamin pair provides a mechanism for the2 long range sensing and tethering of membranes
4c5owvA_
99.6 11
PDB header:lipid binding protein
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: an oligomerised bacterial dynamin pair provides a mechanism for the2 long-range sensing and tethering of membranes
5c5gnuA_
99.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:mitofusin-1;
PDBTitle: the structure of mini-mfn1 apo
6c5owvC_
99.5 9
PDB header:lipid binding protein
Chain: C: PDB Molecule:gtp-binding protein;
PDBTitle: an oligomerised bacterial dynamin pair provides a mechanism for the2 long-range sensing and tethering of membranes
7c5mvfA_
99.4 15
PDB header:endocytosis
Chain: A: PDB Molecule:eh domain-containing protein 4;
PDBTitle: active structure of ehd4 complexed with adp
8d1tq4a_
99.3 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
9c4b3xA_
99.2 16
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: bacterial translation initiation factor if2 (1-363), apo form
10c2hjgA_
99.2 22
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein enga;
PDBTitle: the crystal structure of the b. subtilis yphc gtpase in complex with2 gdp
11c4kjzD_
99.2 18
PDB header:translation
Chain: D: PDB Molecule:translation initiation factor if-2;
PDBTitle: crystal structure of thermus thermophilus if2, apo and gdp-bound forms2 (2-474)
12c3wbkB_
99.2 16
PDB header:biosynthetic protein
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: crystal structure analysis of eukaryotic translation initiation factor2 5b and 1a complex
13c4upyB_
99.2 19
PDB header:ribosome
Chain: B: PDB Molecule:eif5b;
PDBTitle: mammalian 80s hcv-ires initiation complex with eif5b pre-like state
14c2x2fD_
99.2 16
PDB header:hydrolase
Chain: D: PDB Molecule:dynamin-1;
PDBTitle: dynamin 1 gtpase dimer, short axis form
15c1mkyA_
99.2 21
PDB header:ligand binding protein
Chain: A: PDB Molecule:probable gtp-binding protein enga;
PDBTitle: structural analysis of the domain interactions in der, a switch2 protein containing two gtpase domains
16c4p4sB_
99.1 11
PDB header:antiviral protein/hydrolase
Chain: B: PDB Molecule:interferon-induced gtp-binding protein mx1;
PDBTitle: gmppcp-bound stalkless-mxa
17c3j8gX_
99.1 14
PDB header:ribosome
Chain: X: PDB Molecule:gtpase der;
PDBTitle: electron cryo-microscopy structure of enga bound with the 50s2 ribosomal subunit
18c5fg3A_
99.1 21
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor if-2;
PDBTitle: crystal structure of gdp-bound aif5b from aeropyrum pernix
19c5izmA_
99.1 18
PDB header:translation
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdpnp
20c1g7tA_
99.1 21
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if2/eif5b;
PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp
21c5dn8A_
not modelled 99.1 21
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtpase der;
PDBTitle: 1.76 angstrom crystal structure of gtp-binding protein der from2 coxiella burnetii in complex with gdp.
22c4n3nA_
not modelled 99.1 21
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5b-like protein,
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-1116) from chaetomium thermophilum, apo form
23c3j4jA_
not modelled 99.1 19
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: model of full-length t. thermophilus translation initiation factor 22 refined against its cryo-em density from a 30s initiation complex map
24c5k0yS_
not modelled 99.0 13
PDB header:translation
Chain: S: PDB Molecule:eukaryotic initiation factor 2 gamma subunit (eif2-gamma);
PDBTitle: m48s late-stage initiation complex, purified from rabbit reticulocytes2 lysates, displaying eif2 ternary complex and eif3 i and g subunits3 relocated to the intersubunit face
25c1wb1C_
not modelled 99.0 15
PDB header:protein synthesis
Chain: C: PDB Molecule:translation elongation factor selb;
PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp
26c1d2eA_
not modelled 98.9 20
PDB header:rna binding protein
Chain: A: PDB Molecule:elongation factor tu (ef-tu);
PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp
27c6djqA_
not modelled 98.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:vps1 gtpase-bse;
PDBTitle: vps1 gtpase-bse fusion complexed with gdp.alf4-
28c2plfA_
not modelled 98.9 14
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form.
29c5izkB_
not modelled 98.9 19
PDB header:translation
Chain: B: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdp
30c3gehA_
not modelled 98.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
31c3j81k_
not modelled 98.9 18
PDB header:ribosome
Chain: K: PDB Molecule:es10;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
32c4nclB_
not modelled 98.9 21
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b-like protein;
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp
33c4byxV_
not modelled 98.9 18
PDB header:ribosome
Chain: V: PDB Molecule:eukaryotic translation initiation factor 5b, probable
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic2 translation initiation complex
34c2qptA_
not modelled 98.8 19
PDB header:endocytosis
Chain: A: PDB Molecule:eh domain-containing protein-2;
PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling
35c4zu9A_
not modelled 98.8 16
PDB header:translation
Chain: A: PDB Molecule:elongation factor selb;
PDBTitle: crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
36c4h1vA_
not modelled 98.8 10
PDB header:hydrolase
Chain: A: PDB Molecule:dynamin-1-like protein;
PDBTitle: gmp-pnp bound dynamin-1-like protein gtpase-ged fusion
37c4bejB_
not modelled 98.8 12
PDB header:hydrolase
Chain: B: PDB Molecule:dynamin 1-like protein;
PDBTitle: nucleotide-free dynamin 1-like protein (dnm1l, drp1, dlp1)
38c2e87A_
not modelled 98.8 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1320;
PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp
39c1kk3A_
not modelled 98.8 15
PDB header:translation
Chain: A: PDB Molecule:eif2gamma;
PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+
40c2bvnB_
not modelled 98.8 15
PDB header:elongation factor
Chain: B: PDB Molecule:elongation factor tu;
PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic enacyloxin iia
41c1xzqA_
not modelled 98.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:probable trna modification gtpase trme;
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
42c5ady6_
not modelled 98.8 22
PDB header:ribosome
Chain: 6: PDB Molecule:gtpase hflx;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with hflx
43c2hdnJ_
not modelled 98.8 14
PDB header:translation
Chain: J: PDB Molecule:elongation factor ef-tu;
PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
44c3izyP_
not modelled 98.8 17
PDB header:rna, ribosomal protein
Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial;
PDBTitle: mammalian mitochondrial translation initiation factor 2
45c2qthA_
not modelled 98.8 17
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of a gtp-binding protein from the hyperthermophilic2 archaeon sulfolobus solfataricus in complex with gdp
46d2dy1a2
not modelled 98.8 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
47c3wyaA_
not modelled 98.8 15
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of gdp-bound ef1alpha from pyrococcus horikoshii
48c1zo1I_
not modelled 98.8 21
PDB header:translation/rna
Chain: I: PDB Molecule:translation initiation factor 2;
PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex
49c3ievA_
not modelled 98.7 22
PDB header:nucleotide binding protein/rna
Chain: A: PDB Molecule:gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
50c2ywfA_
not modelled 98.7 16
PDB header:translation
Chain: A: PDB Molecule:gtp-binding protein lepa;
PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
51d2c78a3
not modelled 98.7 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
52c3cb4D_
not modelled 98.7 21
PDB header:translation
Chain: D: PDB Molecule:gtp-binding protein lepa;
PDBTitle: the crystal structure of lepa
53c3j65o_
not modelled 98.7 16
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l15;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
54d1jwyb_
not modelled 98.7 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
55c1mj1A_
not modelled 98.7 22
PDB header:ribosome
Chain: A: PDB Molecule:elongation factor tu;
PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
56c3agqA_
not modelled 98.7 18
PDB header:translation,transferase
Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q
PDBTitle: structure of viral polymerase form ii
57c3degC_
not modelled 98.7 21
PDB header:ribosome
Chain: C: PDB Molecule:gtp-binding protein lepa;
PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
58c3agjC_
not modelled 98.6 21
PDB header:translation/hydrolase
Chain: C: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex
59c3md0A_
not modelled 98.6 19
PDB header:transport protein
Chain: A: PDB Molecule:arginine/ornithine transport system atpase;
PDBTitle: crystal structure of arginine/ornithine transport system atpase from2 mycobacterium tuberculosis bound to gdp (a ras-like gtpase3 superfamily protein)
60c1skqB_
not modelled 98.6 18
PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-alpha;
PDBTitle: the crystal structure of sulfolobus solfataricus elongation factor 1-2 alpha in complex with magnesium and gdp
61c4byrP_
not modelled 98.6 17
PDB header:ribosome
Chain: P: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet2 eukaryotic translation initiation complex
62c3qq5A_
not modelled 98.6 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:small gtp-binding protein;
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
63c6em5b_
not modelled 98.5 18
PDB header:ribosome
Chain: B: PDB Molecule:60s ribosomal protein l3;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
64c4qjty_
not modelled 98.5 20
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
65d2akab1
not modelled 98.5 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
66c1egaB_
not modelled 98.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
67c2elfA_
not modelled 98.5 11
PDB header:translation
Chain: A: PDB Molecule:protein translation elongation factor 1a;
PDBTitle: crystal structure of the selb-like elongation factor ef-pyl from2 methanosarcina mazei
68d1svia_
not modelled 98.5 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
69c4zciA_
not modelled 98.5 19
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtp-binding protein typa/bipa;
PDBTitle: crystal structure of escherichia coli gtpase bipa/typa
70c5ucvA_
not modelled 98.5 17
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a ribosome biogenesis gtp-binding protein (ysxc)2 from neisseria gonorrhoeae with bound gdp
71c3mmpC_
not modelled 98.4 14
PDB header:transferase
Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts;
PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
72c4csu9_
not modelled 98.4 15
PDB header:ribosome
Chain: 9: PDB Molecule:gtpase obge/cgta;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with obge
73c3vr1B_
not modelled 98.4 27
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor 3;
PDBTitle: crystal structure analysis of the translation factor rf3
74c3p27A_
not modelled 98.4 17
PDB header:signaling protein
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: crystal structure of s. cerevisiae hbs1 protein (gdp-bound form), a2 translational gtpase involved in rna quality control pathways and3 interacting with dom34/pelota
75c1zunB_
not modelled 98.4 17
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylate transferase, subunit
PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae
76d1f60a3
not modelled 98.4 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
77d1h65a_
not modelled 98.4 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
78c1g7cA_
not modelled 98.3 15
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
79c3nxsA_
not modelled 98.3 21
PDB header:transport protein
Chain: A: PDB Molecule:lao/ao transport system atpase;
PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp
80d1puia_
not modelled 98.3 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
81c2qagC_
not modelled 98.3 13
PDB header:cell cycle, structural protein
Chain: C: PDB Molecule:septin-7;
PDBTitle: crystal structure of human septin trimer 2/6/7
82c1wf3A_
not modelled 98.3 23
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
83c1s0uA_
not modelled 98.3 15
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: eif2gamma apo
84c6h4dA_
not modelled 98.3 18
PDB header:rna binding protein
Chain: A: PDB Molecule:small ribosomal subunit biogenesis gtpase rsga;
PDBTitle: crystal structure of rsga from pseudomonas aeruginosa
85c2wsmB_
not modelled 98.3 13
PDB header:metal binding protein
Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb);
PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus
86c4dheA_
not modelled 98.3 22
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a probable gtp-binding protein engb from2 burkholderia thailandensis
87c1udxA_
not modelled 98.3 21
PDB header:protein binding
Chain: A: PDB Molecule:the gtp-binding protein obg;
PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8
88c3geiB_
not modelled 98.2 13
PDB header:hydrolase
Chain: B: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp
89c4whjA_
not modelled 98.2 11
PDB header:antiviral protein, hydrolase
Chain: A: PDB Molecule:interferon-induced gtp-binding protein mx2;
PDBTitle: myxovirus resistance protein 2 (mxb)
90d1zunb3
not modelled 98.2 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
91d2bv3a2
not modelled 98.2 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
92c6fgzA_
not modelled 98.2 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:dynamin;
PDBTitle: cyanidioschyzon merolae dnm1 (cmdnm1)
93d1u0la2
not modelled 98.2 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
94c4a2iV_
not modelled 98.2 13
PDB header:ribosome/hydrolase
Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga;
PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
95d2p67a1
not modelled 98.1 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
96c3p1jC_
not modelled 98.1 12
PDB header:hydrolase
Chain: C: PDB Molecule:gtpase imap family member 2;
PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
97c2h5eB_
not modelled 98.1 15
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor rf-3;
PDBTitle: crystal structure of e.coli polypeptide release factor rf3
98d1d2ea3
not modelled 98.1 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
99c3j25A_
not modelled 98.1 20
PDB header:translation
Chain: A: PDB Molecule:tetracycline resistance protein tetm;
PDBTitle: structural basis for tetm-mediated tetracycline resistance
100c3mcaA_
not modelled 98.1 13
PDB header:translation regulation/hydrolase
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
101c2qa5A_
not modelled 98.1 20
PDB header:cell cycle, structural protein
Chain: A: PDB Molecule:septin-2;
PDBTitle: crystal structure of sept2 g-domain
102c3izq1_
not modelled 98.1 11
PDB header:ribosomal protein,hydrolase
Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
103c2rcnA_
not modelled 98.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:probable gtpase engc;
PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium.
104c3t5dC_
not modelled 98.0 16
PDB header:signaling protein
Chain: C: PDB Molecule:septin-7;
PDBTitle: crystal structure of septin 7 in complex with gdp
105c1jalA_
not modelled 98.0 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ychf protein;
PDBTitle: ychf protein (hi0393)
106c2j3eA_
not modelled 98.0 21
PDB header:protein transport
Chain: A: PDB Molecule:t7i23.11 protein;
PDBTitle: dimerization is important for the gtpase activity of2 chloroplast translocon components attoc33 and pstoc159
107c2yv5A_
not modelled 98.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:yjeq protein;
PDBTitle: crystal structure of yjeq from aquifex aeolicus
108d1t9ha2
not modelled 98.0 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
109c1t9hA_
not modelled 98.0 12
PDB header:hydrolase
Chain: A: PDB Molecule:probable gtpase engc;
PDBTitle: the crystal structure of yloq, a circularly permuted gtpase.
110c3t35A_
not modelled 98.0 17
PDB header:motor protein
Chain: A: PDB Molecule:dynamin-related protein 1a, linker, dynamin-related protein
PDBTitle: arabidopsis thaliana dynamin-related protein 1a in postfission state
111d2qm8a1
not modelled 98.0 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
112c4lpsA_
not modelled 98.0 14
PDB header:metal binding protein
Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein hypb;
PDBTitle: crystal structure of hypb from helicobacter pylori in complex with2 nickel
113c6cesA_
not modelled 98.0 16
PDB header:signaling protein
Chain: A: PDB Molecule:ras-related gtp-binding protein a;
PDBTitle: cryo-em structure of gator1-rag
114c4fn5A_
not modelled 98.0 17
PDB header:translation/antibiotic
Chain: A: PDB Molecule:elongation factor g 1;
PDBTitle: elongation factor g 1 (pseudomonas aeruginosa) in complex with argyrin2 b
115c5hcnA_
not modelled 98.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:gpn-loop gtpase 1;
PDBTitle: gpn-loop gtpase npa3 in complex with gmppcp
116c4p4sA_
not modelled 98.0 10
PDB header:antiviral protein/hydrolase
Chain: A: PDB Molecule:interferon-induced gtp-binding protein mx1;
PDBTitle: gmppcp-bound stalkless-mxa
117c5irrB_
not modelled 98.0 25
PDB header:hydrolase
Chain: B: PDB Molecule:septin-like protein;
PDBTitle: crystal structure of septin gtpase domain from chlamydomonas2 reinhardtii
118c3j2k7_
not modelled 97.9 13
PDB header:ribosome/translation
Chain: 7: PDB Molecule:eukaryotic polypeptide chain release factor 3;
PDB Fragment:unp residues 147-584; PDBTitle: cryo-em structure of the mammalian erf1-erf3-associated termination2 complex
119c4a9aB_
not modelled 97.9 23
PDB header:translation
Chain: B: PDB Molecule:ribosome-interacting gtpase 1;
PDBTitle: structure of rbg1 in complex with tma46 dfrp domain
120d1efca3
not modelled 97.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below