Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0219_(-)_262254_262802
DateTue Jul 23 14:50:27 BST 2019
Unique Job ID55834d232d389d3a
SequenceMFDIATRFKN ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:13.106 Y:15.397 Z:33.503
Model (left) based on template c6gcsj_
Top template information
PDB header:oxidoreductase
Chain: J: PDB Molecule:nujm subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
Confidence and coverage
Confidence: 24.9% Coverage: 11%
20 residues ( 11% of your sequence) have been modelled with 24.9% confidence by the single highest scoring template.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6gcsj_



24.9 35
PDB header:oxidoreductase
Chain: J: PDB Molecule:nujm subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
2c3wmmP_



17.8 47
PDB header:photosynthesis
Chain: P: PDB Molecule:lh1 beta polypeptide;
PDBTitle: crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
3c4dzoA_



16.0 54
PDB header:cell cycle
Chain: A: PDB Molecule:mitotic spindle assembly checkpoint protein mad1;
PDBTitle: structure of human mad1 c-terminal domain reveals its involvement in2 kinetochore targeting
4c4rtaB_



14.1 47
PDB header:protein binding
Chain: B: PDB Molecule:protein dpy-30 homolog;
PDBTitle: cystal structure of the dpy30 for mll/set1 compass h3k4 trimethylation
5c5m1hA_



11.6 41
PDB header:viral protein
Chain: A: PDB Molecule:gag protein;
PDBTitle: structure of a spumaretrovirus gag central domain reveals an ancient2 retroviral capsid
6c6hcyA_



10.0 18
PDB header:membrane protein
Chain: A: PDB Molecule:metalloreductase steap4;
PDBTitle: human steap4 bound to nadp, fad, heme and fe(iii)-nta.
7c2eqfA_



9.8 78
PDB header:hydrolase
Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 3;
PDBTitle: solution structure of the 7th a20-type zinc finger domain2 from human tumor necrosis factor, alpha-induced protein3
8c5d2mG_



7.5 42
PDB header:ligase,protein binding
Chain: G: PDB Molecule:zinc finger protein 451;
PDBTitle: complex between human sumo2-rangap1, ubc9 and znf451
9c6j8lB_



7.4 50
PDB header:immune system
Chain: B: PDB Molecule:avh240;
PDBTitle: phytophthora sojae effector psavh240 inhibits a host aspartic protease2 secretion to promote infection
10c6bo5D_



6.2 23
PDB header:membrane protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: trpv2 ion channel in partially closed state

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below