Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0221_(-)_264067_265476
DateTue Jul 23 14:50:27 BST 2019
Unique Job IDb85551665f9d3836
SequenceVKRLSGWDAV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:67.001 Y:47.031 Z:67.658
Model (left) based on template c6chjB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:diacylglycerol o-acyltransferase;
PDBTitle: wax ester synthase/diacylglycerol acyltransferase from marinobacter2 aquaeolei vt8
Confidence and coverage
Confidence:100.0% Coverage: 88%
411 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
469 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6chjB_



100.0 26
PDB header:transferase
Chain: B: PDB Molecule:diacylglycerol o-acyltransferase;
PDBTitle: wax ester synthase/diacylglycerol acyltransferase from marinobacter2 aquaeolei vt8
2c4zxiA_



100.0 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:tyrocidine synthetase 3;
PDBTitle: crystal structure of holo-ab3403 a four domain nonribosomal peptide2 synthetase bound to amp and glycine
3c2vsqA_



100.0 12
PDB header:ligase
Chain: A: PDB Molecule:surfactin synthetase subunit 3;
PDBTitle: structure of surfactin a synthetase c (srfa-c), a nonribosomal peptide2 synthetase termination module
4c5u89A_



100.0 13
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:amino acid adenylation domain protein;
PDBTitle: crystal structure of a cross-module fragment from the dimodular nrps2 dhbf
5c5t81A_



100.0 12
PDB header:biosynthetic protein
Chain: A: PDB Molecule:epob;
PDBTitle: rhombohedral crystal form of the epob nrps cyclization-docking2 bidomain from sorangium cellulosum
6c6p1jA_



100.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo2;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo2 serine module
7c5m6pB_



100.0 11
PDB header:isomerase
Chain: B: PDB Molecule:tyrocidine synthase 2;
PDBTitle: crystal structure of the epimerization domain from module 3 of2 tyrocidine synthetase b, tycb3(e)
8c6aefB_



100.0 12
PDB header:transferase
Chain: B: PDB Molecule:polyketide synthase associated protein papa2;
PDBTitle: papa2 acyl transferase
9c2xhgA_



100.0 12
PDB header:isomerase
Chain: A: PDB Molecule:tyrocidine synthetase a;
PDBTitle: crystal structure of the epimerization domain from the initiation2 module of tyrocidine biosynthesis
10c5t3eA_



100.0 10
PDB header:ligase
Chain: A: PDB Molecule:bacillamide synthetase heterocyclization domain;
PDBTitle: crystal structure of a nonribosomal peptide synthetase2 heterocyclization domain.
11c4znmB_



100.0 13
PDB header:ligase
Chain: B: PDB Molecule:c-domain type ii peptide synthetase;
PDBTitle: crystal structure of sgcc5 protein from streptomyces globisporus (apo2 form)
12c2jgpA_



100.0 14
PDB header:ligase
Chain: A: PDB Molecule:tyrocidine synthetase 3;
PDBTitle: structure of the tycc5-6 pcp-c bidomain of the tyrocidine synthetase2 tycc
13c4tx3B_



100.0 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide synthetase, module 7;
PDBTitle: complex of the x-domain and oxyb from teicoplanin biosynthesis
14c6m7lB_



100.0 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative non-ribosomal peptide synthetase;
PDBTitle: complex of oxya with the x-domain from gpa biosynthesis
15c6cgoB_



100.0 15
PDB header:biosynthetic protein
Chain: B: PDB Molecule:condensation domain protein;
PDBTitle: molecular basis for condensation domain-mediated chain release from2 the enacyloxin polyketide synthase
16c6ad3A_



100.0 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:lovastatin nonaketide synthase moka;
PDBTitle: structural characterization of the condensation domain from monacolin2 k polyketide synthase moka
17c4jn3B_



100.0 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cda peptide synthetase i;
PDBTitle: crystal structures of the first condensation domain of the cda2 synthetase
18c5ja2A_



100.0 13
PDB header:ligase
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: entf, a terminal nonribosomal peptide synthetase module bound to the2 non-native mbth-like protein pa2412
19c4zxjA_



100.0 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: crystal structure of holo-entf a nonribosomal peptide synthetase in2 the thioester-forming conformation
20c1l5aA_



100.0 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:amide synthase;
PDBTitle: crystal structure of vibh, an nrps condensation enzyme
21c6ozvA_



not modelled 100.0 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo1;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo1 serine module in3 complex with amp
22c5dijA_



not modelled 100.0 13
PDB header:unknown function
Chain: A: PDB Molecule:tqaa;
PDBTitle: the crystal structure of ct
23c1q9jA_



not modelled 100.0 13
PDB header:ligase
Chain: A: PDB Molecule:polyketide synthase associated protein 5;
PDBTitle: structure of polyketide synthase associated protein 5 from2 mycobacterium tuberculosis
24c4hvmC_



not modelled 100.0 11
PDB header:biosynthetic protein
Chain: C: PDB Molecule:tlmii;
PDBTitle: crystal structure of tallysomycin biosynthesis protein tlmii
25c3fotA_



not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:15-o-acetyltransferase;
PDBTitle: structural and functional characterization of tri3 trichothecene 15-o-2 acetyltransferase from fusarium sporotrichioides
26c6dd2A_



not modelled 99.9 11
PDB header:transferase
Chain: A: PDB Molecule:probable hydroxycinnamoyl transferase;
PDBTitle: crystal structure of selaginella moellendorffii hct
27c4g0bA_



not modelled 99.9 11
PDB header:transferase
Chain: A: PDB Molecule:hydroxycinnamoyl-coa shikimate/quinate
PDBTitle: structure of native hct from coffea canephora
28d1l5aa1



not modelled 99.9 9
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
29d1q9ja1



not modelled 99.9 15
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
30c2e1uA_



not modelled 99.8 13
PDB header:transferase
Chain: A: PDB Molecule:acyl transferase;
PDBTitle: crystal structure of dendranthema morifolium dmat
31c2bghA_



not modelled 99.8 11
PDB header:transferase
Chain: A: PDB Molecule:vinorine synthase;
PDBTitle: crystal structure of vinorine synthase
32d1l5aa2



not modelled 99.8 10
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
33c2xr7A_



not modelled 99.7 12
PDB header:transferase
Chain: A: PDB Molecule:malonyltransferase;
PDBTitle: crystal structure of nicotiana tabacum malonyltransferase (ntmat1)2 complexed with malonyl-coa
34d1q9ja2



not modelled 99.7 11
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
35c4ke4A_



not modelled 99.6 11
PDB header:transferase
Chain: A: PDB Molecule:hydroxycinnamoyl-coa:shikimate hydroxycinnamoyl
PDBTitle: elucidation of the structure and reaction mechanism of sorghum bicolor2 hydroxycinnamoyltransferase and its structural relationship to other3 coa-dependent transferases and synthases
36c3b2sA_



not modelled 99.6 9
PDB header:transferase
Chain: A: PDB Molecule:trichothecene 3-o-acetyltransferase;
PDBTitle: crystal structure of f. graminearum tri101 complexed with coenzyme a2 and deoxynivalenol
37c2zbaD_



not modelled 99.2 11
PDB header:transferase
Chain: D: PDB Molecule:trichothecene 3-o-acetyltransferase;
PDBTitle: crystal structure of f. sporotrichioides tri101 complexed with2 coenzyme a and t-2
38c6eqoB_



not modelled 98.8 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: tri-functional propionyl-coa synthase of erythrobacter sp. nap1 with2 bound nadp+ and phosphomethylphosphonic acid adenylate ester
39c5es8A_



not modelled 98.2 11
PDB header:ligase
Chain: A: PDB Molecule:linear gramicidin synthetase subunit a;
PDBTitle: crystal structure of the initiation module of lgra in the thiolation2 state
40c1xl8B_



not modelled 91.1 17
PDB header:transferase
Chain: B: PDB Molecule:peroxisomal carnitine o-octanoyltransferase;
PDBTitle: crystal structure of mouse carnitine octanoyltransferase in2 complex with octanoylcarnitine
41d1xl7a2



not modelled 90.8 14
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
42d1nm8a2



not modelled 90.3 11
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
43d1q23a_



not modelled 89.5 16
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
44d3claa_



not modelled 88.8 27
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
45c3rqcB_



not modelled 85.0 16
PDB header:transferase
Chain: B: PDB Molecule:probable lipoamide acyltransferase;
PDBTitle: crystal structure of the catalytic core of the 2-oxoacid dehydrogenase2 multienzyme complex from thermoplasma acidophilum
46c2i9dC_



not modelled 84.9 26
PDB header:transferase
Chain: C: PDB Molecule:chloramphenicol acetyltransferase;
PDBTitle: chloramphenicol acetyltransferase
47d1ndba2



not modelled 84.8 14
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
48c6h60A_



not modelled 83.7 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component, mitochondrial;
PDBTitle: pseudo-atomic structural model of the e3bp component of the human2 pyruvate dehydrogenase multienzyme complex
49c3maeA_



not modelled 83.7 11
PDB header:transferase
Chain: A: PDB Molecule:2-oxoisovalerate dehydrogenase e2 component,
PDBTitle: crystal structure of probable dihydrolipoamide acetyltransferase from2 listeria monocytogenes 4b f2365
50c1t7qA_



not modelled 81.9 12
PDB header:transferase
Chain: A: PDB Molecule:carnitine acetyltransferase;
PDBTitle: crystal structure of the f565a mutant of murine carnitine2 acetyltransferase in complex with carnitine and coa
51c2fyoA_



not modelled 79.4 12
PDB header:transferase
Chain: A: PDB Molecule:carnitine o-palmitoyltransferase ii, mitochondrial;
PDBTitle: crystal structure of rat carnitine palmitoyltransferase 2 in space2 group p43212
52d1scza_



not modelled 79.1 27
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
53c2fy2A_



not modelled 75.1 12
PDB header:transferase
Chain: A: PDB Molecule:choline o-acetyltransferase;
PDBTitle: structures of ligand bound human choline acetyltransferase provide2 insight into regulation of acetylcholine synthesis
54c3l60A_



not modelled 74.3 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:branched-chain alpha-keto acid dehydrogenase;
PDBTitle: crystal structure of branched-chain alpha-keto acid dehydrogenase2 subunit e2 from mycobacterium tuberculosis
55c1q6xA_



not modelled 73.9 13
PDB header:transferase
Chain: A: PDB Molecule:choline o-acetyltransferase;
PDBTitle: crystal structure of rat choline acetyltransferase
56c2h4tB_



not modelled 65.2 12
PDB header:transferase
Chain: B: PDB Molecule:carnitine o-palmitoyltransferase ii, mitochondrial;
PDBTitle: crystal structure of rat carnitine palmitoyltransferase ii
57d1t1ua2



not modelled 63.0 11
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
58c4n72B_



not modelled 52.0 17
PDB header:transferase
Chain: B: PDB Molecule:pyruvate dehydrogenase (dihydrolipoyltransacetylase
PDBTitle: catalytic domain from dihydrolipoamide acetyltransferase of pyruvate2 dehydrogenase from escherichia coli
59c3b8kA_



not modelled 51.9 27
PDB header:transferase
Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase;
PDBTitle: structure of the truncated human dihydrolipoyl acetyltransferase (e2)
60d1dpba_



not modelled 51.7 23
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
61d1b5sa_



not modelled 49.4 23
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
62c2ii4C_



not modelled 49.0 20
PDB header:transferase
Chain: C: PDB Molecule:lipoamide acyltransferase component of branched-chain
PDBTitle: crystal structure of a cubic core of the dihydrolipoamide2 acyltransferase (e2b) component in the branched-chain alpha-ketoacid3 dehydrogenase complex (bckdc), coenzyme a-bound form
63d1ywqa1



not modelled 16.9 11
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
64c2h0uA_



not modelled 16.7 7
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph-flavin oxidoreductase;
PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori
65d1dk0a_



not modelled 12.2 32
Fold:Heme-binding protein A (HasA)
Superfamily:Heme-binding protein A (HasA)
Family:Heme-binding protein A (HasA)
66d1p94a_



not modelled 11.4 14
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:CopG-like
67c3ddrC_



not modelled 11.1 32
PDB header:membrane protein/heme binding protein
Chain: C: PDB Molecule:hemophore hasa;
PDBTitle: structure of the serratia marcescens hemophore receptor hasr-ile671gly2 mutant in complex with its hemophore hasa and heme
68c2k5jB_



not modelled 8.3 4
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein yiif;
PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
69c2kw3A_



not modelled 8.1 30
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein rfx5;
PDBTitle: heterotrimeric interaction between rfx5 and rfxap
70c5wmmA_



not modelled 7.7 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:nrps;
PDBTitle: crystal structure of an adenylation domain interrupted by a2 methylation domain (ama4) from nonribosomal peptide synthetase tios
71c6gtsC_



not modelled 6.7 4
PDB header:transcription
Chain: C: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: structure of the atat-atar complex bound dna
72d1mnta_



not modelled 6.0 19
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Arc/Mnt-like phage repressors
73d1ykia1



not modelled 6.0 5
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
74c6ajnF_



not modelled 5.1 5
PDB header:toxin
Chain: F: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: crystal structure of atatr bound with accoa
75c3eo8A_



not modelled 5.0 6
PDB header:flavoprotein
Chain: A: PDB Molecule:blub-like flavoprotein;
PDBTitle: crystal structure of blub-like flavoprotein (yp_001089088.1) from2 clostridium difficile 630 at 1.74 a resolution

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below