Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0256c_(PPE2)_307877_309547
DateTue Jul 23 14:50:31 BST 2019
Unique Job ID1132be5d6fd175ec
SequenceMTAPIWMASP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.573 Y:72.050 Z:72.708
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 31%
171 residues ( 31% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 56% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 35
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 26
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 26
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 19
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.2 18
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.7 10
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.5 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.5 18
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.4 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.9 16
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.6 19
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
95.4 10
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
95.2 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
94.6 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
90.0 20
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
56.9 26
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17d1ui5a2
28.2 17
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
18c2kg7A_
15.4 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
19d1xkna_
15.2 11
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
20c4xb6D_
15.0 16
PDB header:transferase
Chain: D: PDB Molecule:alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase;
PDBTitle: structure of the e. coli c-p lyase core complex
21c6et5I_
not modelled 14.4 44
PDB header:photosynthesis
Chain: I: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
22c6et5R_
not modelled 14.4 44
PDB header:photosynthesis
Chain: R: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
23c6et5s_
not modelled 14.4 44
PDB header:photosynthesis
Chain: S: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
24c6et5U_
not modelled 14.4 44
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
25c6et5O_
not modelled 14.4 44
PDB header:photosynthesis
Chain: O: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
26c6et5d_
not modelled 14.4 44
PDB header:photosynthesis
Chain: D: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
27c6et5j_
not modelled 14.4 44
PDB header:photosynthesis
Chain: J: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
28c6et5y_
not modelled 14.4 44
PDB header:photosynthesis
Chain: Y: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
29c6et5g_
not modelled 14.4 44
PDB header:photosynthesis
Chain: G: PDB Molecule:light-harvesting protein b-1015 beta chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
30c6et5m_
not modelled 14.4 44
PDB header:photosynthesis
Chain: M: PDB Molecule:reaction center protein m chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
31c6et5a_
not modelled 14.4 44
PDB header:photosynthesis
Chain: A: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
32c6et52_
not modelled 14.4 44
PDB header:photosynthesis
Chain: 2: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
33c6et5v_
not modelled 14.4 44
PDB header:photosynthesis
Chain: V: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
34c6et55_
not modelled 14.4 44
PDB header:photosynthesis
Chain: 5: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
35c6et5X_
not modelled 14.4 44
PDB header:photosynthesis
Chain: X: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
36c6et5p_
not modelled 14.4 44
PDB header:photosynthesis
Chain: P: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
37c4el8A_
not modelled 13.9 33
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 48;
PDBTitle: the unliganded structure of c.bescii cela gh48 module
38d1zeea1
not modelled 13.4 30
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
39c2nvjA_
not modelled 12.4 30
PDB header:hydrolase
Chain: A: PDB Molecule:25mer peptide from vacuolar atp synthase subunit
PDBTitle: nmr structures of transmembrane segment from subunit a from2 the yeast proton v-atpase
40c5l85B_
not modelled 11.9 36
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
41c1l2aD_
not modelled 11.8 18
PDB header:hydrolase
Chain: D: PDB Molecule:cellobiohydrolase;
PDBTitle: the crystal structure and catalytic mechanism of2 cellobiohydrolase cels, the major enzymatic component of3 the clostridium thermocellum cellulosome
42d1l1ya_
not modelled 11.8 18
Fold:alpha/alpha toroid
Superfamily:Six-hairpin glycosidases
Family:Cellulases catalytic domain
43c4fusA_
not modelled 10.9 27
PDB header:hydrolase
Chain: A: PDB Molecule:rtx toxins and related ca2+-binding protein;
PDBTitle: the x-ray structure of hahella chejuensis family 48 glycosyl hydrolase
44c4kkkA_
not modelled 10.8 27
PDB header:hydrolase
Chain: A: PDB Molecule:exoglucanase s;
PDBTitle: complex structure of catalytic domain of clostridium cellulovorans2 exgs and cellotetraose
45c4jjjA_
not modelled 10.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: the structure of t. fusca gh48 d224n mutant
46c3h6pB_
not modelled 10.3 35
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
47c1bkvA_
not modelled 9.9 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
48c6aokA_
not modelled 9.5 33
PDB header:hydrolase
Chain: A: PDB Molecule:ceg4;
PDBTitle: crystal structure of legionella pneumophila effector ceg4 with n-2 terminal tev protease cleavage sequence
49c1bkvC_
not modelled 9.5 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
50c1bkvB_
not modelled 9.5 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
51c6cgjA_
not modelled 9.2 33
PDB header:hydrolase
Chain: A: PDB Molecule:effector protein lem4 (lpg1101);
PDBTitle: structure of the had domain of effector protein lem4 (lpg1101) from2 legionella pneumophila
52d1dmua_
not modelled 9.1 56
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease BglI
53c2iu1A_
not modelled 9.0 28
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
54d1g9ga_
not modelled 8.9 23
Fold:alpha/alpha toroid
Superfamily:Six-hairpin glycosidases
Family:Cellulases catalytic domain
55c1bzgA_
not modelled 8.8 14
PDB header:hormone
Chain: A: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: the solution structure of human parathyroid hormone-related2 protein (1-34) in near-physiological solution, nmr, 303 structures
56c3sjrB_
not modelled 8.6 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
57c3zfsA_
not modelled 8.6 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:f420-reducing hydrogenase, subunit alpha;
PDBTitle: cryo-em structure of the f420-reducing nife-hydrogenase from a2 methanogenic archaeon with bound substrate
58c2fulE_
not modelled 8.5 28
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
59c1vytF_
not modelled 8.4 63
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
60c2lkqA_
not modelled 7.9 56
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
61d1vlfn1
not modelled 7.5 100
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
62c4deyB_
not modelled 7.3 29
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent l-type calcium channel subunit alpha-1c;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav1.2 i-ii linker.
63c5bv9A_
not modelled 6.9 33
PDB header:hydrolase
Chain: A: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: the structure of bacillus pumilus gh48 in complex with cellobiose
64c2jtwA_
not modelled 6.7 38
PDB header:membrane protein
Chain: A: PDB Molecule:transmembrane helix 7 of yeast vatpase;
PDBTitle: solution structure of tm7 bound to dpc micelles
65c4c47B_
not modelled 6.6 25
PDB header:cell adhesion
Chain: B: PDB Molecule:inner membrane lipoprotein;
PDBTitle: salmonella enterica trimeric lipoprotein sadb
66c5i4rA_
not modelled 6.5 43
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
67c1t0jC_
not modelled 6.4 57
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
68c2l5bA_
not modelled 6.0 35
PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
69d1dlpa1
not modelled 6.0 18
Fold:beta-Prism II
Superfamily:alpha-D-mannose-specific plant lectins
Family:alpha-D-mannose-specific plant lectins
70d3e46a1
not modelled 6.0 40
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
71c4gyxC_
not modelled 5.9 50
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
72c5hl8B_
not modelled 5.8 23
PDB header:protein transport
Chain: B: PDB Molecule:type ii secretion system protein l;
PDBTitle: 1.93 angstrom resolution crystal structure of a pullulanase-specific2 type ii secretion system integral cytoplasmic membrane protein gspl3 (c-terminal fragment; residues 309-397) from klebsiella pneumoniae4 subsp. pneumoniae ntuh-k2044
73c5u31A_
not modelled 5.8 27
PDB header:hydrolase/dna
Chain: A: PDB Molecule:crispr-associated endonuclease c2c1;
PDBTitle: crystal structure of aacc2c1-sgrna-8mer substrate dna ternary complex
74c5wqeA_
not modelled 5.8 27
PDB header:rna binding protein
Chain: A: PDB Molecule:crispr-associated endonuclease c2c1;
PDBTitle: crystal structure of alicyclobacillus acidoterrestris c2c1 in complex2 with single-guide rna at 3.1 angstrom resolution
75d2fgga1
not modelled 5.7 15
Fold:dsRBD-like
Superfamily:Rv2632c-like
Family:Rv2632c-like
76c4f3fC_
not modelled 5.7 38
PDB header:immune system
Chain: C: PDB Molecule:mesothelin;
PDBTitle: crystal structure of msln7-64 morab-009 fab complex
77c6nbiP_
not modelled 5.7 80
PDB header:signaling protein
Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
78c4u39Q_
not modelled 5.6 45
PDB header:cell cycle
Chain: Q: PDB Molecule:cell division factor;
PDBTitle: crystal structure of ftsz:mciz complex from bacillus subtilis
79c2wseE_
not modelled 5.5 35
PDB header:photosynthesis
Chain: E: PDB Molecule:photosystem i reaction center subunit iv a, chloroplastic;
PDBTitle: improved model of plant photosystem i
80c2vwaE_
not modelled 5.5 25
PDB header:unknown function
Chain: E: PDB Molecule:putative uncharacterized protein pf13_0012;
PDBTitle: crystal structure of a sporozoite protein essential for2 liver stage development of malaria parasite
81c4dmtA_
not modelled 5.4 46
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
82c4dmtC_
not modelled 5.4 46
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
83c4dmtB_
not modelled 5.4 46
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
84c5uc0B_
not modelled 5.3 60
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
85d1fcda3
not modelled 5.3 31
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
86c2rpwX_
not modelled 5.3 38
PDB header:transport protein
Chain: X: PDB Molecule:25 meric peptide from v-type proton atpase
PDBTitle: structure of a peptide derived from h+-v-atpase subunit a
87c4mveB_
not modelled 5.3 29
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of tcur_1030 protein from thermomonospora curvata
88c4wpyA_
not modelled 5.2 15
PDB header:de novo protein
Chain: A: PDB Molecule:protein dl-rv1738;
PDBTitle: racemic crystal structure of rv1738 from mycobacterium tuberculosis2 (form-ii)
89c3lgeG_
not modelled 5.2 42
PDB header:lyase/protein binding
Chain: G: PDB Molecule:sorting nexin-9;
PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
90c3lgeF_
not modelled 5.2 42
PDB header:lyase/protein binding
Chain: F: PDB Molecule:sorting nexin-9;
PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
91c1nauA_
not modelled 5.2 17
PDB header:hormone/growth factor
Chain: A: PDB Molecule:glucagon;
PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles
92c4gyxB_
not modelled 5.1 55
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
93c4gyxA_
not modelled 5.1 55
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
94d1paqa_
not modelled 5.0 18
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below