Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0280_(PPE3)_339364_340974
DateTue Jul 23 14:50:34 BST 2019
Unique Job IDcb4f4fce49a4d3ed
SequenceMTLWMASPPE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.686 Y:72.050 Z:72.708
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 32%
171 residues ( 32% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 57% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 39
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2c2g38B_
100.0 30
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
3d2g38b1
100.0 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
4c4xy3A_
100.0 19
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
97.9 20
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.6 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.4 14
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.3 14
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.1 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.4 18
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
93.5 18
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
93.3 12
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
92.9 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
91.4 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
86.0 19
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
56.1 30
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17d1ui5a2
45.0 22
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
18d1zeea1
25.1 42
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
19c3zfsA_
24.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:f420-reducing hydrogenase, subunit alpha;
PDBTitle: cryo-em structure of the f420-reducing nife-hydrogenase from a2 methanogenic archaeon with bound substrate
20c4xb6D_
17.2 22
PDB header:transferase
Chain: D: PDB Molecule:alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase;
PDBTitle: structure of the e. coli c-p lyase core complex
21c5l85B_
not modelled 16.5 36
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
22c3sjrB_
not modelled 16.4 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
23c2nvjA_
not modelled 15.8 40
PDB header:hydrolase
Chain: A: PDB Molecule:25mer peptide from vacuolar atp synthase subunit
PDBTitle: nmr structures of transmembrane segment from subunit a from2 the yeast proton v-atpase
24c2ahmG_
not modelled 15.7 29
PDB header:viral protein, replication
Chain: G: PDB Molecule:replicase polyprotein 1ab, heavy chain;
PDBTitle: crystal structure of sars-cov super complex of non-structural2 proteins: the hexadecamer
25c3j00Z_
not modelled 14.6 4
PDB header:ribosome/ribosomal protein
Chain: Z: PDB Molecule:cell division protein ftsq;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
26d1dlpa1
not modelled 13.2 12
Fold:beta-Prism II
Superfamily:alpha-D-mannose-specific plant lectins
Family:alpha-D-mannose-specific plant lectins
27c6aokA_
not modelled 12.7 38
PDB header:hydrolase
Chain: A: PDB Molecule:ceg4;
PDBTitle: crystal structure of legionella pneumophila effector ceg4 with n-2 terminal tev protease cleavage sequence
28d1vlfn1
not modelled 12.3 100
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
29c1bkvA_
not modelled 11.6 44
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
30c6cgjA_
not modelled 11.4 38
PDB header:hydrolase
Chain: A: PDB Molecule:effector protein lem4 (lpg1101);
PDBTitle: structure of the had domain of effector protein lem4 (lpg1101) from2 legionella pneumophila
31c1bkvC_
not modelled 11.2 44
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
32c1bkvB_
not modelled 11.2 44
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
33c3ub0D_
not modelled 10.8 17
PDB header:replication
Chain: D: PDB Molecule:non-structural protein 6, nsp6,;
PDBTitle: crystal structure of the nonstructural protein 7 and 8 complex of2 feline coronavirus
34c2wseE_
not modelled 9.2 30
PDB header:photosynthesis
Chain: E: PDB Molecule:photosystem i reaction center subunit iv a, chloroplastic;
PDBTitle: improved model of plant photosystem i
35d1dmua_
not modelled 8.8 44
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease BglI
36c1bzgA_
not modelled 8.8 14
PDB header:hormone
Chain: A: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: the solution structure of human parathyroid hormone-related2 protein (1-34) in near-physiological solution, nmr, 303 structures
37c2kg7A_
not modelled 8.8 59
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
38c4u39Q_
not modelled 8.6 36
PDB header:cell cycle
Chain: Q: PDB Molecule:cell division factor;
PDBTitle: crystal structure of ftsz:mciz complex from bacillus subtilis
39c4f3fC_
not modelled 8.5 38
PDB header:immune system
Chain: C: PDB Molecule:mesothelin;
PDBTitle: crystal structure of msln7-64 morab-009 fab complex
40c5hl8B_
not modelled 8.2 40
PDB header:protein transport
Chain: B: PDB Molecule:type ii secretion system protein l;
PDBTitle: 1.93 angstrom resolution crystal structure of a pullulanase-specific2 type ii secretion system integral cytoplasmic membrane protein gspl3 (c-terminal fragment; residues 309-397) from klebsiella pneumoniae4 subsp. pneumoniae ntuh-k2044
41d1nkta4
not modelled 8.1 58
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
42c6nbiP_
not modelled 7.9 60
PDB header:signaling protein
Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
43c2m5lA_
not modelled 7.6 50
PDB header:viral protein
Chain: A: PDB Molecule:ns5a protein;
PDBTitle: ns5a308
44c1vytF_
not modelled 7.5 50
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
45c5dn4A_
not modelled 7.0 43
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan hydrolase flgj;
PDBTitle: structure of the glycoside hydrolase domain from salmonella2 typhimurium flgj
46c4gyxC_
not modelled 6.9 38
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
47c2jtwA_
not modelled 6.9 50
PDB header:membrane protein
Chain: A: PDB Molecule:transmembrane helix 7 of yeast vatpase;
PDBTitle: solution structure of tm7 bound to dpc micelles
48c3ogrA_
not modelled 6.8 38
PDB header:hydrolase
Chain: A: PDB Molecule:beta-galactosidase;
PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose
49d1fcda3
not modelled 6.8 40
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
50c6fxoA_
not modelled 6.8 67
PDB header:hydrolase
Chain: A: PDB Molecule:bifunctional autolysin;
PDBTitle: crystal structure of major bifunctional autolysin
51d2apla1
not modelled 6.4 32
Fold:PG0816-like
Superfamily:PG0816-like
Family:PG0816-like
52c6gp2A_
not modelled 6.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain;
PDBTitle: ribonucleotide reductase class ie r2 from mesoplasma florum, dopa-2 active form
53c2lkqA_
not modelled 6.4 56
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
54c3e6qL_
not modelled 6.3 20
PDB header:isomerase
Chain: L: PDB Molecule:putative 5-carboxymethyl-2-hydroxymuconate isomerase;
PDBTitle: putative 5-carboxymethyl-2-hydroxymuconate isomerase from pseudomonas2 aeruginosa.
55c4dmtB_
not modelled 6.3 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
56c4dmtC_
not modelled 6.3 38
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
57c4dmtA_
not modelled 6.3 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
58c2iunD_
not modelled 6.2 50
PDB header:viral protein
Chain: D: PDB Molecule:avian adenovirus celo long fibre;
PDBTitle: structure of the c-terminal head domain of the avian adenovirus celo2 long fibre (p21 crystal form)
59c4cuaB_
not modelled 6.2 14
PDB header:hydrolase
Chain: B: PDB Molecule:beta-galactosidase;
PDBTitle: unravelling the multiple functions of the architecturally2 intricate streptococcus pneumoniae beta-galactosidase, bgaa
60c2zycA_
not modelled 6.0 60
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan hydrolase flgj;
PDBTitle: crystal structure of peptidoglycan hydrolase from2 sphingomonas sp. a1
61c1t0jC_
not modelled 6.0 43
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
62c5uc0B_
not modelled 6.0 100
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
63c6qpiA_
not modelled 5.9 19
PDB header:membrane protein
Chain: A: PDB Molecule:anoctamin-6;
PDBTitle: cryo-em structure of calcium-free mtmem16f lipid scramblase in2 nanodisc
64c4mveB_
not modelled 5.8 24
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of tcur_1030 protein from thermomonospora curvata
65c1vytE_
not modelled 5.8 50
PDB header:transport protein
Chain: E: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
66c2d9zA_
not modelled 5.7 35
PDB header:signaling protein
Chain: A: PDB Molecule:protein kinase c, nu type;
PDBTitle: solution structure of the ph domain of protein kinase c, nu2 type from human
67c4gyxA_
not modelled 5.7 45
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
68c4gyxB_
not modelled 5.7 45
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
69c6et5U_
not modelled 5.7 58
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
70c6et5g_
not modelled 5.7 58
PDB header:photosynthesis
Chain: G: PDB Molecule:light-harvesting protein b-1015 beta chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
71c6et5d_
not modelled 5.7 58
PDB header:photosynthesis
Chain: D: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
72c6et5I_
not modelled 5.7 58
PDB header:photosynthesis
Chain: I: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
73c6et5R_
not modelled 5.7 58
PDB header:photosynthesis
Chain: R: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
74c6et5s_
not modelled 5.7 58
PDB header:photosynthesis
Chain: S: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
75c6et5a_
not modelled 5.7 58
PDB header:photosynthesis
Chain: A: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
76c6et5v_
not modelled 5.7 58
PDB header:photosynthesis
Chain: V: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
77c6et5m_
not modelled 5.7 58
PDB header:photosynthesis
Chain: M: PDB Molecule:reaction center protein m chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
78c6et5p_
not modelled 5.7 58
PDB header:photosynthesis
Chain: P: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
79c6et52_
not modelled 5.7 58
PDB header:photosynthesis
Chain: 2: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
80c6et5O_
not modelled 5.7 58
PDB header:photosynthesis
Chain: O: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
81c6et5j_
not modelled 5.7 58
PDB header:photosynthesis
Chain: J: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
82c6et5y_
not modelled 5.7 58
PDB header:photosynthesis
Chain: Y: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
83c6et5X_
not modelled 5.7 58
PDB header:photosynthesis
Chain: X: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
84c6et55_
not modelled 5.7 58
PDB header:photosynthesis
Chain: 5: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
85c4qdnA_
not modelled 5.7 80
PDB header:hydrolase
Chain: A: PDB Molecule:flagellar protein flgj [peptidoglycan hydrolase];
PDBTitle: crystal structure of the endo-beta-n-acetylglucosaminidase from2 thermotoga maritima
86c2vwaE_
not modelled 5.6 25
PDB header:unknown function
Chain: E: PDB Molecule:putative uncharacterized protein pf13_0012;
PDBTitle: crystal structure of a sporozoite protein essential for2 liver stage development of malaria parasite
87c6dzsD_
not modelled 5.5 31
PDB header:oxidoreductase
Chain: D: PDB Molecule:homoserine dehydrogenase;
PDBTitle: mycobacterial homoserine dehydrogenase thra in complex with nadp
88c3qi7A_
not modelled 5.5 57
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution
89c4dexB_
not modelled 5.5 50
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav2.2 i-ii linker.
90d1otga_
not modelled 5.5 23
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:5-carboxymethyl-2-hydroxymuconate isomerase (CHMI)
91c1e1hD_
not modelled 5.4 60
PDB header:hydrolase
Chain: D: PDB Molecule:botulinum neurotoxin type a light chain;
PDBTitle: crystal structure of recombinant botulinum neurotoxin type a light2 chain, self-inhibiting zn endopeptidase.
92c6igzE_
not modelled 5.4 31
PDB header:plant protein
Chain: E: PDB Molecule:psae;
PDBTitle: structure of psi-lhci
93c4lzxB_
not modelled 5.3 31
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
94c5vmoB_
not modelled 5.3 50
PDB header:viral protein/apoptosis
Chain: B: PDB Molecule:bcl-2 interacting mediator of cell death;
PDBTitle: crystal structure of grouper iridovirus giv66:bim complex
95c3fi7A_
not modelled 5.3 80
PDB header:hydrolase
Chain: A: PDB Molecule:lmo1076 protein;
PDBTitle: crystal structure of the autolysin auto (lmo1076) from listeria2 monocytogenes, catalytic domain
96c4m1lB_
not modelled 5.2 36
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-bound cam
97d1jyaa_
not modelled 5.2 19
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
98c2o01E_
not modelled 5.1 38
PDB header:photosynthesis
Chain: E: PDB Molecule:photosystem i reaction center subunit iv a, chloroplast;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below