Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0299_(-)_363476_363778
DateTue Jul 23 14:50:36 BST 2019
Unique Job ID7de676a75bbf453b
SequenceLIAPGDIAPR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.388 Y:33.556 Z:34.691
Model (left) based on template c5hk3B_
Top template information
PDB header:hydrolase/dna
Chain: B: PDB Molecule:endoribonuclease mazf6;
PDBTitle: crystal structure of m. tuberculosis mazf-mt3 t52d-f62d mutant in2 complex with dna
Confidence and coverage
Confidence: 97.2% Coverage: 95%
95 residues ( 95% of your sequence) have been modelled with 97.2% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5hk3B_



97.2 15
PDB header:hydrolase/dna
Chain: B: PDB Molecule:endoribonuclease mazf6;
PDBTitle: crystal structure of m. tuberculosis mazf-mt3 t52d-f62d mutant in2 complex with dna
2c5xe3B_



87.7 18
PDB header:hydrolase/antitoxin
Chain: B: PDB Molecule:endoribonuclease mazf4;
PDBTitle: endoribonuclease in complex with its cognate antitoxin from2 mycobacterial species
3c5wygC_



87.3 17
PDB header:hydrolase
Chain: C: PDB Molecule:probable endoribonuclease mazf7;
PDBTitle: the crystal structure of the apo form of mtb mazf
4d1ub4a_



83.7 18
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
5c5ccaA_



80.3 16
PDB header:hydrolase
Chain: A: PDB Molecule:endoribonuclease mazf3;
PDBTitle: crystal structure of mtb toxin
6d1ne8a_



60.6 16
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
7c4mzpC_



60.3 18
PDB header:hydrolase
Chain: C: PDB Molecule:mazf mrna interferase;
PDBTitle: mazf from s. aureus crystal form iii, c2221, 2.7 a
8c5hjzA_



54.0 17
PDB header:hydrolase/rna
Chain: A: PDB Molecule:endoribonuclease mazf9;
PDBTitle: structure of m. tuberculosis mazf-mt1 (rv2801c) in complex with rna
9d1m1fa_



26.4 14
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
10c5a9qZ_



25.2 43
PDB header:transport protein
Chain: Z: PDB Molecule:nuclear pore complex protein nup85;
PDBTitle: human nuclear pore complex
11c6g90J_



18.2 35
PDB header:splicing
Chain: J: PDB Molecule:u1 small nuclear ribonucleoprotein component snu71;
PDBTitle: prespliceosome structure provides insight into spliceosome assembly2 and regulation (map a2)
12c3j6vL_



17.3 67
PDB header:ribosome
Chain: L: PDB Molecule:28s ribosomal protein s12, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
13c6fblA_



15.7 29
PDB header:rna binding protein
Chain: A: PDB Molecule:mina-1;
PDBTitle: nmr solution structure of mina-1(254-334)
14c1zn1L_



15.7 33
PDB header:biosynthetic/structural protein/rna
Chain: L: PDB Molecule:30s ribosomal protein s12;
PDBTitle: coordinates of rrf fitted into cryo-em map of the 70s post-termination2 complex
15d2uubl1



15.4 42
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
16d1i94l_



15.3 42
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
17d2qall1



14.2 33
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
18c1s1hL_



14.0 33
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s23;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
19c5xyiX_



13.6 33
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
20c3u5gX_



13.5 33
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
21c3zeyS_



not modelled 13.1 25
PDB header:ribosome
Chain: S: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
22c3j20N_



not modelled 13.0 50
PDB header:ribosome
Chain: N: PDB Molecule:30s ribosomal protein s12p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
23c2zkql_



not modelled 13.0 42
PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
24c3h7yA_



not modelled 12.1 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb;
PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form
25c2xzmL_



not modelled 11.5 25
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s12;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
26c1meqA_



not modelled 8.1 38
PDB header:viral protein
Chain: A: PDB Molecule:exterior membrane glycoprotein (gp120);
PDBTitle: hiv gp120 c5
27d1t98a1



not modelled 7.9 83
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MukF N-terminal domain-like
28c6roiC_



not modelled 7.5 26
PDB header:lipid transport
Chain: C: PDB Molecule:cell division control protein 50;
PDBTitle: cryo-em structure of the partially activated drs2p-cdc50p
29d2es7a1



not modelled 7.0 25
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:HyaE-like
30c5vbaA_



not modelled 7.0 23
PDB header:chaperone, hydrolase
Chain: A: PDB Molecule:lysozyme, esx-1 secretion-associated protein espg1 chimera;
PDBTitle: structure of espg1 chaperone from the type vii (esx-1) secretion2 system determined with the assistance of n-terminal t4 lysozyme3 fusion
31c2kpoA_



not modelled 6.0 56
PDB header:de novo protein
Chain: A: PDB Molecule:rossmann 2x2 fold protein;
PDBTitle: solution nmr structure of de novo designed rossmann 2x2 fold protein,2 northeast structural genomics consortium target or16
32c6fcxA_



not modelled 5.9 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:methylenetetrahydrofolate reductase;
PDBTitle: structure of human 5,10-methylenetetrahydrofolate reductase (mthfr)
33c2lpeA_



not modelled 5.6 23
PDB header:signaling protein
Chain: A: PDB Molecule:kinase suppressor of ras 1;
PDBTitle: solution nmr structure of the ksr1 ca1-ca1a domain

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