Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0317c_(glpQ2)_385173_385943
DateTue Jul 23 14:50:38 BST 2019
Unique Job IDf097d71a81eb844c
SequenceVEFLRHGGRI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.924 Y:38.940 Z:57.289
Model (left) based on template c4oecD_
Top template information
PDB header:hydrolase
Chain: D: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase from2 thermococcus kodakarensis kod1
Confidence and coverage
Confidence:100.0% Coverage: 95%
242 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4oecD_
100.0 22
PDB header:hydrolase
Chain: D: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase from2 thermococcus kodakarensis kod1
2c4r7oE_
100.0 20
PDB header:hydrolase
Chain: E: PDB Molecule:glycerophosphoryl diester phosphodiesterase, putative;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterasefrom bacillus anthraci
3c3l12A_
100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution
4c2pz0B_
100.0 30
PDB header:hydrolase
Chain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
5c5t91A_
100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of b. subtilis 168 glpq in complex with bicine
6c2p76H_
100.0 22
PDB header:hydrolase
Chain: H: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase from2 staphylococcus aureus
7c1ydyA_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of periplasmic glycerophosphodiester2 phosphodiesterase from escherichia coli
8d1ydya1
100.0 20
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
9c3no3A_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphodiester phosphodiesterase;
PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase2 (bdi_0402) from parabacteroides distasonis atcc 8503 at 1.89 a3 resolution
10c2otdC_
100.0 25
PDB header:hydrolase
Chain: C: PDB Molecule:glycerophosphodiester phosphodiesterase;
PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a
11c3mz2A_
100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of a glycerophosphoryl diester phosphodiesterase2 (bdi_3922) from parabacteroides distasonis atcc 8503 at 1.55 a3 resolution
12c3qvqB_
100.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase olei02445;
PDBTitle: the structure of an oleispira antarctica phosphodiesterase olei024452 in complex with the product sn-glycerol-3-phosphate
13d1zcca1
100.0 22
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
14c3ks6A_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (17743486) from agrobacterium tumefaciens str. c583 (dupont) at 1.80 a resolution
15c2o55A_
100.0 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative glycerophosphodiester phosphodiesterase;
PDBTitle: crystal structure of a putative glycerophosphodiester2 phosphodiesterase from galdieria sulphuraria
16c3i10A_
100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (np_812074.1) from bacteroides thetaiotaomicron3 vpi-5482 at 1.35 a resolution
17d1o1za_
100.0 21
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
18d1vd6a1
100.0 26
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
19c5vugA_
100.0 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein rv2277c;
PDBTitle: crystal structure of glycerophosphoryl diester phosphodiesterase2 domain of uncharacterized protein rv2277c from mycobacterium3 tuberculosis
20c3ch0A_
100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphodiester phosphodiesterase;
PDBTitle: crystal structure of glycerophosphoryl diester phosphodiesterase2 (yp_677622.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution
21c3rlhA_
not modelled 100.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a;
PDBTitle: crystal structure of a class ii phospholipase d from loxosceles2 intermedia venom
22c2f9rC_
not modelled 100.0 15
PDB header:hydrolase
Chain: C: PDB Molecule:sphingomyelinase d 1;
PDBTitle: crystal structure of the inactive state of the smase i, a2 sphingomyelinase d from loxosceles laeta venom
23c3rlgA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a;
PDBTitle: crystal structure of loxosceles intermedia phospholipase d isoform 12 h12a mutant
24c4q6xA_
not modelled 100.0 15
PDB header:lyase
Chain: A: PDB Molecule:phospholipase d stsictox-betaic1;
PDBTitle: structure of phospholipase d beta1b1i from sicarius terrosus venom at2 2.14 a resolution
25c1djyB_
not modelled 97.6 24
PDB header:lipid degradation
Chain: B: PDB Molecule:phosphoinositide-specific phospholipase c,
PDBTitle: phosphoinositide-specific phospholipase c-delta1 from rat2 complexed with inositol-2,4,5-trisphosphate
26d1qasa3
not modelled 97.6 24
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Mammalian PLC
27d2zkmx4
not modelled 97.6 21
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Mammalian PLC
28c3qr0A_
not modelled 97.5 24
PDB header:hydrolase
Chain: A: PDB Molecule:phospholipase c-beta (plc-beta);
PDBTitle: crystal structure of s. officinalis plc21
29c3ohmB_
not modelled 97.4 24
PDB header:signaling protein / hydrolase
Chain: B: PDB Molecule:1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
PDBTitle: crystal structure of activated g alpha q bound to its effector2 phospholipase c beta 3
30c2fjuB_
not modelled 97.4 21
PDB header:signaling protein,apoptosis/hydrolase
Chain: B: PDB Molecule:1-phosphatidylinositol-4,5-bisphosphate
PDBTitle: activated rac1 bound to its effector phospholipase c beta 2
31d1vkfa_
not modelled 93.7 14
Fold:TIM beta/alpha-barrel
Superfamily:GlpP-like
Family:GlpP-like
32c3ktsA_
not modelled 93.1 22
PDB header:transcriptional regulator
Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein;
PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365
33d1rd5a_
not modelled 90.9 11
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
34c3h4wA_
not modelled 90.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylinositol-specific phospholipase c1;
PDBTitle: structure of a ca+2 dependent phosphatidylinositol-specific2 phospholipase c (pi-plc) enzyme from streptomyces antibioticus
35d7reqa2
not modelled 87.6 14
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
36d1qopa_
not modelled 86.5 11
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
37c4s1aB_
not modelled 85.5 20
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein cthe_0052 from2 ruminiclostridium thermocellum atcc 27405
38c2zq0B_
not modelled 85.4 8
PDB header:hydrolase
Chain: B: PDB Molecule:alpha-glucosidase (alpha-glucosidase susb);
PDBTitle: crystal structure of susb complexed with acarbose
39c1e1cA_
not modelled 85.2 14
PDB header:isomerase
Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain;
PDBTitle: methylmalonyl-coa mutase h244a mutant
40c4rnhA_
not modelled 85.0 19
PDB header:transferase, hydrolase
Chain: A: PDB Molecule:motility regulator;
PDBTitle: pamora tandem diguanylate cyclase - phosphodiesterase, c-di-gmp2 complex
41c3a24A_
not modelled 84.9 20
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-galactosidase;
PDBTitle: crystal structure of bt1871 retaining glycosidase
42c4nu7C_
not modelled 84.7 12
PDB header:isomerase
Chain: C: PDB Molecule:ribulose-phosphate 3-epimerase;
PDBTitle: 2.05 angstrom crystal structure of ribulose-phosphate 3-epimerase from2 toxoplasma gondii.
43c5d88A_
not modelled 84.4 23
PDB header:hydrolase
Chain: A: PDB Molecule:predicted protease of the collagenase family;
PDBTitle: the structure of the u32 peptidase mk0906
44c5xgdA_
not modelled 83.9 16
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein pa0861;
PDBTitle: crystal structure of the pas-ggdef-eal domain of pa0861 from2 pseudomonas aeruginosa in complex with gtp
45c3pjwA_
not modelled 83.8 19
PDB header:lyase
Chain: A: PDB Molecule:cyclic dimeric gmp binding protein;
PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23
46c2r6oB_
not modelled 82.4 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative diguanylate cyclase/phosphodiesterase (ggdef & eal
PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from thiobacillus denitrificans
47c5m3cB_
not modelled 82.3 16
PDB header:hydrolase
Chain: B: PDB Molecule:diguanylate cyclase;
PDBTitle: structure of the hybrid domain (ggdef-eal) of pa0575 from pseudomonas2 aeruginosa pao1 at 2.8 ang. with gtp and ca2+ bound to the active3 site of the ggdef domain
48c5yrpB_
not modelled 80.6 20
PDB header:biosynthetic protein
Chain: B: PDB Molecule:sensory box/response regulator;
PDBTitle: crystal structure of the eal domain of mycobacterium smegmatis dcpa
49c3hvbB_
not modelled 80.1 15
PDB header:hydrolase
Chain: B: PDB Molecule:protein fimx;
PDBTitle: crystal structure of the dual-domain ggdef-eal module of fimx from2 pseudomonas aeruginosa
50c3gfzB_
not modelled 79.5 19
PDB header:hydrolase, signaling protein
Chain: B: PDB Molecule:klebsiella pneumoniae blrp1;
PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex
51d2cc0a1
not modelled 78.2 11
Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:NodB-like polysaccharide deacetylase
52d1vc4a_
not modelled 78.1 17
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
53c2nv2U_
not modelled 77.8 15
PDB header:lyase/transferase
Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
54c5hqcA_
not modelled 76.8 15
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 97 enzyme;
PDBTitle: a glycoside hydrolase family 97 enzyme r171k variant from2 pseudoalteromonas sp. strain k8
55c2p10D_
not modelled 76.6 9
PDB header:hydrolase
Chain: D: PDB Molecule:mll9387 protein;
PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution
56c2htmB_
not modelled 76.4 6
PDB header:biosynthetic protein
Chain: B: PDB Molecule:thiazole biosynthesis protein thig;
PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8
57c3pfmA_
not modelled 75.4 17
PDB header:signaling protein
Chain: A: PDB Molecule:ggdef domain protein;
PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf
58c4lykB_
not modelled 75.2 14
PDB header:hydrolase
Chain: B: PDB Molecule:cyclic di-gmp phosphodiesterase yaha;
PDBTitle: crystal structure of the eal domain of c-di-gmp specific2 phosphodiesterase yaha in complex with activating cofactor mg++
59c5xfmD_
not modelled 74.9 23
PDB header:hydrolase
Chain: D: PDB Molecule:alpha-glucosidase;
PDBTitle: crystal structure of beta-arabinopyranosidase
60c4hu4B_
not modelled 73.6 17
PDB header:signaling protein,hydrolase
Chain: B: PDB Molecule:oxygen sensor protein dosp;
PDBTitle: crystal structure of eal domain of the e. coli dosp - dimeric form
61c2zbtB_
not modelled 72.3 15
PDB header:lyase
Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8
62c3kzpA_
not modelled 72.3 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative diguanylate cyclase/phosphodiesterase;
PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from listaria monocytigenes
63c4wcjA_
not modelled 71.8 13
PDB header:hydrolase
Chain: A: PDB Molecule:polysaccharide deacetylase;
PDBTitle: structure of icab from ammonifex degensii
64d2p10a1
not modelled 71.5 11
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Mll9387-like
65c4q6jB_
not modelled 71.4 23
PDB header:unknown function
Chain: B: PDB Molecule:lmo0131 protein;
PDBTitle: crystal structure of eal domain protein from listeria monocytogenes2 egd-e
66c4y8eA_
not modelled 71.1 20
PDB header:metal binding protein
Chain: A: PDB Molecule:pa3825 eal;
PDBTitle: pa3825-eal ca-apo structure
67c3femB_
not modelled 70.5 17
PDB header:biosynthetic protein, transferase
Chain: B: PDB Molecule:pyridoxine biosynthesis protein snz1;
PDBTitle: structure of the synthase subunit pdx1.1 (snz1) of plp synthase from2 saccharomyces cerevisiae
68c4hjfA_
not modelled 70.1 19
PDB header:signaling protein
Chain: A: PDB Molecule:ggdef family protein;
PDBTitle: eal domain of phosphodiesterase pdea in complex with c-di-gmp and ca++
69c5m1tB_
not modelled 70.0 11
PDB header:signaling protein
Chain: B: PDB Molecule:mucr phosphodiesterase;
PDBTitle: pamucr phosphodiesterase, c-di-gmp complex
70d1xm3a_
not modelled 69.9 19
Fold:TIM beta/alpha-barrel
Superfamily:ThiG-like
Family:ThiG-like
71c2c3zA_
not modelled 69.7 15
PDB header:lyase
Chain: A: PDB Molecule:indole-3-glycerol phosphate synthase;
PDBTitle: crystal structure of a truncated variant of indole-3-2 glycerol phosphate synthase from sulfolobus solfataricus
72c4f48A_
not modelled 69.3 13
PDB header:signaling protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the x-ray structural of fimxeal-c-di-gmp-pilz complexes from2 xanthomonas campestris
73c3sy8C_
not modelled 69.2 8
PDB header:transcription regulator
Chain: C: PDB Molecule:rocr;
PDBTitle: crystal structure of the response regulator rocr
74c3bo9B_
not modelled 68.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nitroalkan dioxygenase;
PDBTitle: crystal structure of putative nitroalkan dioxygenase (tm0800) from2 thermotoga maritima at 2.71 a resolution
75c6bkaA_
not modelled 68.1 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitronate monooxygenase;
PDBTitle: crystal structure of nitronate monooxygenase from cyberlindnera2 saturnus
76c4fokA_
not modelled 67.6 14
PDB header:protein binding
Chain: A: PDB Molecule:fimx;
PDBTitle: 1.8 a crystal structure of the fimx eal domain in complex with c-digmp
77d2basa1
not modelled 67.1 3
Fold:TIM beta/alpha-barrel
Superfamily:EAL domain-like
Family:EAL domain
78d2g50a2
not modelled 66.9 17
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
79c3tlqB_
not modelled 66.5 11
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein ydiv;
PDBTitle: crystal structure of eal-like domain protein ydiv
80d1pkla2
not modelled 65.8 15
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
81c6du6D_
not modelled 65.6 14
PDB header:transferase
Chain: D: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of the pyruvate kinase (pk1) from the mosquito aedes2 aegypti
82c6hyeF_
not modelled 65.2 13
PDB header:plant protein
Chain: F: PDB Molecule:pyridoxal 5'-phosphate synthase subunit pdx1.3;
PDBTitle: pdx1.2/pdx1.3 complex (pdx1.3:k97a)
83c3qz6A_
not modelled 64.8 8
PDB header:lyase
Chain: A: PDB Molecule:hpch/hpai aldolase;
PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
84c3inpA_
not modelled 64.7 13
PDB header:isomerase
Chain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase;
PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
85c3t07D_
not modelled 63.8 14
PDB header:transferase/transferase inhibitor
Chain: D: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
86d1ka9f_
not modelled 63.5 15
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Histidine biosynthesis enzymes
87d2aama1
not modelled 63.3 34
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:TM1410-like
88c2aamA_
not modelled 63.3 34
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein tm1410;
PDBTitle: crystal structure of a putative glycosidase (tm1410) from thermotoga2 maritima at 2.20 a resolution
89c5f56A_
not modelled 63.2 34
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:single-stranded-dna-specific exonuclease;
PDBTitle: structure of recj complexed with dna and ssb-ct
90c3s83A_
not modelled 62.7 18
PDB header:signaling protein
Chain: A: PDB Molecule:ggdef family protein;
PDBTitle: eal domain of phosphodiesterase pdea
91d1h5ya_
not modelled 62.6 13
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Histidine biosynthesis enzymes
92d2ptda_
not modelled 62.5 29
Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Bacterial PLC
93c4adsF_
not modelled 62.3 10
PDB header:transferase/transferase
Chain: F: PDB Molecule:pyridoxine biosynthetic enzyme pdx1 homologue, putative;
PDBTitle: crystal structure of plasmodial plp synthase complex
94c5zjnB_
not modelled 61.5 8
PDB header:isomerase
Chain: B: PDB Molecule:putative n-acetylmannosamine-6-phosphate 2-epimerase;
PDBTitle: structure of n-acetylmannosamine-6-phosphate-2-epimerase from vibrio2 cholerae with n-acetylmannosamine-6-phosphate
95c3ffsC_
not modelled 60.3 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:inosine-5-monophosphate dehydrogenase;
PDBTitle: the crystal structure of cryptosporidium parvum inosine-5'-2 monophosphate dehydrogenase
96c2w27A_
not modelled 60.2 3
PDB header:signaling protein
Chain: A: PDB Molecule:ykui protein;
PDBTitle: crystal structure of the bacillus subtilis ykui protein, with an eal2 domain, in complex with substrate c-di-gmp and calcium
97c1t5aB_
not modelled 60.0 19
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme;
PDBTitle: human pyruvate kinase m2
98c1aqfB_
not modelled 60.0 17
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase;
PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate
99c6dq3B_
not modelled 58.8 8
PDB header:hydrolase
Chain: B: PDB Molecule:polysaccharide deacetylase;
PDBTitle: streptococcus pyogenes deacetylase pdi in complex with acetate
100c3e0vB_
not modelled 58.6 15
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of pyruvate kinase from leishmania mexicana in2 complex with sulphate ions
101c3igsB_
not modelled 58.1 12
PDB header:isomerase
Chain: B: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase 2;
PDBTitle: structure of the salmonella enterica n-acetylmannosamine-6-phosphate2 2-epimerase
102c3gndC_
not modelled 57.8 20
PDB header:lyase
Chain: C: PDB Molecule:aldolase lsrf;
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
103c2y8uA_
not modelled 57.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:chitin deacetylase;
PDBTitle: a. nidulans chitin deacetylase
104d1h7na_
not modelled 57.3 20
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
105c4rnjA_
not modelled 56.0 14
PDB header:hydrolase
Chain: A: PDB Molecule:motility regulator;
PDBTitle: pamora phosphodiesterase domain, apo form
106c1pklB_
not modelled 55.7 15
PDB header:transferase
Chain: B: PDB Molecule:protein (pyruvate kinase);
PDBTitle: the structure of leishmania pyruvate kinase
107c5ws9C_
not modelled 55.0 15
PDB header:transferase
Chain: C: PDB Molecule:pyruvate kinase;
PDBTitle: pyruvate kinase (pyk) from mycobacterium tuberculosis in complex with2 oxalate, atp and allosteric activator amp
108c2vgbB_
not modelled 53.3 16
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase isozymes r/l;
PDBTitle: human erythrocyte pyruvate kinase
109c2gjlA_
not modelled 53.1 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical protein pa1024;
PDBTitle: crystal structure of 2-nitropropane dioxygenase
110c4iqlB_
not modelled 53.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:enoyl-(acyl-carrier-protein) reductase ii;
PDBTitle: crystal structure of porphyromonas gingivalis enoyl-acp reductase ii2 (fabk) with cofactors nadph and fmn
111d1wv2a_
not modelled 53.0 17
Fold:TIM beta/alpha-barrel
Superfamily:ThiG-like
Family:ThiG-like
112d1rpxa_
not modelled 50.6 12
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
113c1a3wB_
not modelled 50.0 15
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase;
PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+
114d1liua2
not modelled 49.4 16
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
115c6irtA_
not modelled 49.4 17
PDB header:membrane protein
Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain;
PDBTitle: human lat1-4f2hc complex bound with bch
116d1ccwa_
not modelled 49.0 17
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
117d1thfd_
not modelled 48.0 11
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Histidine biosynthesis enzymes
118c3gk0H_
not modelled 48.0 14
PDB header:transferase
Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase;
PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein from2 burkholderia pseudomallei
119c1e0tD_
not modelled 47.9 14
PDB header:phosphotransferase
Chain: D: PDB Molecule:pyruvate kinase;
PDBTitle: r292d mutant of e. coli pyruvate kinase
120c3qtgA_
not modelled 47.7 18
PDB header:transferase
Chain: A: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of pyruvate kinase from pyrobaculum aerophilum

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below