Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0324_(-)_391352_392032
DateTue Jul 23 14:50:39 BST 2019
Unique Job ID92fc887c59554a24
SequenceMAGQSDRKAA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.136 Y:40.144 Z:54.910
Model (left) based on template c2kkoB_
Top template information
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
Confidence and coverage
Confidence: 99.9% Coverage: 45%
101 residues ( 45% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
226 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2kkoB_
99.9 100
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
2c3tp9B_
99.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein;
PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains
3d1yt8a1
99.9 30
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
4c1yt8A_
99.9 26
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase;
PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa
5d1yt8a3
99.9 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
6c3nhvE_
99.9 29
PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:bh2092 protein;
PDBTitle: crystal structure of bh2092 protein from bacillus halodurans,2 northeast structural genomics consortium target bhr228f
7c5ve5C_
99.9 41
PDB header:oxidoreductase, transferase
Chain: C: PDB Molecule:bpprf;
PDBTitle: crystal structure of persulfide dioxygenase rhodanese fusion protein2 with rhodanese domain inactivating mutation (c314s) from burkholderia3 phytofirmans in complex with glutathione
8c2hhgA_
99.9 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rpa3614;
PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009
9c3ilmD_
99.9 32
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr3790 protein;
PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h
10c3emeA_
99.9 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:rhodanese-like domain protein;
PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus
11c3gk5A_
99.9 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized rhodanese-related protein tvg0868615;
PDBTitle: crystal structure of rhodanese-related protein (tvg0868615) from2 thermoplasma volcanium, northeast structural genomics consortium3 target tvr109a
12d1r1ua_
99.9 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
13d1e0ca1
99.9 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
14c1r22B_
99.8 27
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
15c2lkpB_
99.8 28
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
16d1yt8a4
99.8 22
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
17c4omzG_
99.8 30
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
18d1qxna_
99.8 20
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
19c1e0cA_
99.8 26
PDB header:sulfurtransferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: sulfurtransferase from azotobacter vinelandii
20d1gmxa_
99.8 19
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
21d1r1ta_
not modelled 99.8 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
22c2oqgA_
not modelled 99.8 26
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
23c2moiA_
not modelled 99.8 25
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the cytoplasmic rhodanese domain of the inner2 membrane protein ygap from escherichia coli
24c3aaxB_
not modelled 99.8 24
PDB header:transferase
Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form
25c6mxvA_
not modelled 99.8 18
PDB header:unknown function
Chain: A: PDB Molecule:rhodanese-like family protein;
PDBTitle: the crystal structure of a rhodanese-like family protein from2 francisella tularensis subsp. tularensis schu s4
26c3hzuA_
not modelled 99.8 24
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis
27c3fojA_
not modelled 99.8 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a.
28c1uarA_
not modelled 99.8 26
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8
29c3k9rA_
not modelled 99.8 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:alr3790 protein;
PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c.
30c3pqkD_
not modelled 99.8 26
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
31c1urhA_
not modelled 99.8 32
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli
32d1t3ka_
not modelled 99.8 27
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
33d1tq1a_
not modelled 99.8 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
34d1yt8a2
not modelled 99.8 28
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
35c3jthA_
not modelled 99.8 30
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
36c6bevB_
not modelled 99.8 31
PDB header:transferase
Chain: B: PDB Molecule:thiosulfate sulfurtransferase/rhodanese-like domain-
PDBTitle: human single domain sulfurtranferase tstd1
37c2fsxA_
not modelled 99.8 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase;
PDBTitle: crystal structure of rv0390 from m. tuberculosis
38c2k0zA_
not modelled 99.8 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein hp1203;
PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203
39c1boiA_
not modelled 99.8 27
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: n-terminally truncated rhodanese
40c2zkzC_
not modelled 99.8 25
PDB header:transcription
Chain: C: PDB Molecule:transcriptional repressor pagr;
PDBTitle: crystal structure of the transcriptional repressor pagr of bacillus2 anthracis
41d1rhsa1
not modelled 99.8 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
42c3d1pA_
not modelled 99.8 24
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w;
PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae
43c5xpqB_
not modelled 99.8 35
PDB header:transcription
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator rv0081;
PDBTitle: crystal structure of m.tuberculosis rv0081
44d1okga1
not modelled 99.8 20
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
45c3f6vA_
not modelled 99.8 27
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
46d1urha1
not modelled 99.8 30
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
47c3i2vA_
not modelled 99.8 26
PDB header:transferase
Chain: A: PDB Molecule:adenylyltransferase and sulfurtransferase mocs3;
PDBTitle: crystal structure of human mocs3 rhodanese-like domain
48c3olhA_
not modelled 99.8 24
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: human 3-mercaptopyruvate sulfurtransferase
49d1uara1
not modelled 99.8 21
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
50c6h98A_
not modelled 99.8 21
PDB header:transferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: native crystal structure of anaerobic ergothioneine biosynthesis2 enzyme from chlorobium limicola.
51c3cuoB_
not modelled 99.8 26
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
52d1uara2
not modelled 99.8 33
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
53c6j05B_
not modelled 99.8 35
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
54c3icrA_
not modelled 99.8 35
PDB header:oxidoreductase
Chain: A: PDB Molecule:coenzyme a-disulfide reductase;
PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd
55c3ippA_
not modelled 99.8 28
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje;
PDBTitle: crystal structure of sulfur-free ynje
56c6j0eB_
not modelled 99.8 27
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
57c2jscB_
not modelled 99.8 30
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
58c3f6oB_
not modelled 99.8 20
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
59d1u2wa1
not modelled 99.8 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
60c3utnX_
not modelled 99.8 17
PDB header:transferase
Chain: X: PDB Molecule:thiosulfate sulfurtransferase tum1;
PDBTitle: crystal structure of tum1 protein from saccharomyces cerevisiae
61c4f67A_
not modelled 99.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0176 protein lpg2838;
PDBTitle: three dimensional structure of the double mutant of upf0176 protein2 lpg2838 from legionella pneumophila at the resolution 1.8a, northeast3 structural genomics consortium (nesg) target lgr82
62d1e0ca2
not modelled 99.7 31
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
63c1okgA_
not modelled 99.7 19
PDB header:transferase
Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase;
PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major
64c3g5jA_
not modelled 99.7 26
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:putative atp/gtp binding protein;
PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
65c2dcqA_
not modelled 99.7 14
PDB header:unknown function
Chain: A: PDB Molecule:putative protein at4g01050;
PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana
66c3ntaA_
not modelled 99.7 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide
PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase
67c2jtqA_
not modelled 99.7 29
PDB header:transferase
Chain: A: PDB Molecule:phage shock protein e;
PDBTitle: rhodanese from e.coli
68c3f4aA_
not modelled 99.7 25
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein ygr203w;
PDBTitle: structure of ygr203w, a yeast protein tyrosine phosphatase of the2 rhodanese family
69d1rhsa2
not modelled 99.7 26
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
70d1c25a_
not modelled 99.7 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
71d1ymka1
not modelled 99.6 23
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
72d2p4wa1
not modelled 99.6 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF1790-like
73c2eg4B_
not modelled 99.6 29
PDB header:transferase
Chain: B: PDB Molecule:probable thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase
74d1okga2
not modelled 99.6 18
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
75c2j6pF_
not modelled 99.6 23
PDB header:oxidoreductase
Chain: F: PDB Molecule:sb(v)-as(v) reductase;
PDBTitle: structure of as-sb reductase from leishmania major
76c2uzqE_
not modelled 99.6 25
PDB header:hydrolase
Chain: E: PDB Molecule:m-phase inducer phosphatase 2;
PDBTitle: protein phosphatase, new crystal form
77c3op3A_
not modelled 99.6 24
PDB header:hydrolase
Chain: A: PDB Molecule:m-phase inducer phosphatase 3;
PDBTitle: crystal structure of cell division cycle 25c protein isoform a from2 homo sapiens
78d1whba_
not modelled 99.5 20
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
79d1ulya_
not modelled 99.5 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
80c2vswB_
not modelled 99.5 29
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 16;
PDBTitle: the structure of the rhodanese domain of the human dual specificity2 phosphatase 16
81c1wv9B_
not modelled 99.5 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:rhodanese homolog tt1651;
PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8
82c2oucB_
not modelled 99.4 23
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of the map kinase binding domain of mkp5
83d1urha2
not modelled 99.4 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
84d1hzma_
not modelled 99.4 29
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
85c4g6qA_
not modelled 99.4 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
86d2gwfa1
not modelled 99.4 21
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
87c3r2uC_
not modelled 99.4 17
PDB header:hydrolase
Chain: C: PDB Molecule:metallo-beta-lactamase family protein;
PDBTitle: 2.1 angstrom resolution crystal structure of metallo-beta-lactamase2 from staphylococcus aureus subsp. aureus col
88d2d1ha1
not modelled 99.3 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
89c2qufB_
not modelled 99.3 15
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
90d1ub9a_
not modelled 99.2 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
91c5dukA_
not modelled 99.1 16
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
92c4gcvD_
not modelled 98.7 18
PDB header:transcription
Chain: D: PDB Molecule:putative transcription protein;
PDBTitle: structure of a putative transcription factor (pa1374)from pseudomonas2 aeruginosa
93c4a5mH_
not modelled 98.5 9
PDB header:transcription
Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr;
PDBTitle: redox regulator hypr in its oxidized form
94d2f2ea1
not modelled 98.5 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
95c4nb5D_
not modelled 98.5 19
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
96c3r0aB_
not modelled 98.5 12
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
97d2fswa1
not modelled 98.5 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
98d1z7ua1
not modelled 98.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
99c5hs9A_
not modelled 98.4 18
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator yodb;
PDBTitle: crystal structure of the quinone-bound yodb from b. subtilis
100c4hqeB_
not modelled 98.4 15
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator qsrr;
PDBTitle: the crystal structure of qsrr-dna complex
101c6cmvA_
not modelled 98.4 20
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
102d1y0ua_
not modelled 98.4 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
103d1sfxa_
not modelled 98.3 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
104c3df8A_
not modelled 98.2 24
PDB header:transcription
Chain: A: PDB Molecule:possible hxlr family transcriptional factor;
PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
105c3ctaA_
not modelled 98.2 14
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
106c5jlsA_
not modelled 98.2 13
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
107d1ku9a_
not modelled 98.2 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
108d3ctaa1
not modelled 98.2 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
109c2gxgA_
not modelled 98.2 16
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
110d1yyva1
not modelled 98.1 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
111c5jbrA_
not modelled 98.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
112d2etha1
not modelled 98.0 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
113c3k0lA_
not modelled 98.0 15
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
114c2rdpA_
not modelled 98.0 17
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
115c3zmdD_
not modelled 97.9 16
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
116c3cjnA_
not modelled 97.9 14
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
117c4xrfA_
not modelled 97.9 12
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
118c3bpxB_
not modelled 97.9 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
119d1okra_
not modelled 97.9 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
120d2a61a1
not modelled 97.9 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite