Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0335c_(PE6)_399535_400050
DateTue Jul 23 14:50:40 BST 2019
Unique Job ID208508567af050c3
SequenceVRSMGFLHRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.298 Y:22.870 Z:57.350
Model (left) based on template c2g38A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.8% Coverage: 28%
48 residues ( 28% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2g38A_
99.8 31
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
2d2g38a1
99.8 31
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c5xfsA_
99.8 40
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
4d1wa8a1
43.1 12
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
5d1lghb_
31.7 33
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
6c3dhgB_
23.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit;
PDBTitle: crystal structure of toluene 4-monoxygenase hydroxylase
7c3onjA_
21.6 17
PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
8c1wrgA_
21.3 33
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
9c2fsuA_
18.2 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein phnh;
PDBTitle: crystal structure of the phnh protein from escherichia coli
10d2fsua1
18.2 25
Fold:PLP-dependent transferase-like
Superfamily:PhnH-like
Family:PhnH-like
11c2di2A_
15.4 55
PDB header:metal binding protein
Chain: A: PDB Molecule:nucleocapsid protein p7;
PDBTitle: nmr structure of the hiv-2 nucleocapsid protein
12d2incb1
14.9 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
13c5jydA_
14.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of a putative short chain dehydrogenase from2 burkholderia cenocepacia
14c6et5u_
13.1 33
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
15c4rglA_
12.5 21
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
16c2w0cR_
12.5 29
PDB header:virus
Chain: R: PDB Molecule:protein p3;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
17c1nc8A_
12.2 55
PDB header:viral protein
Chain: A: PDB Molecule:nucleocapsid protein;
PDBTitle: high-resolution solution nmr structure of the minimal2 active domain of the human immunodeficiency virus type-23 nucleocapsid protein, 15 structures
18c4wj2A_
10.5 15
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
19c3sriB_
10.0 57
PDB header:cell invasion
Chain: B: PDB Molecule:rhoptry neck protein 2;
PDBTitle: crystal structure of plasmodium falciparum ama1 in complex with a 29aa2 pfron2 peptide
20c2inpD_
9.9 10
PDB header:oxidoreductase
Chain: D: PDB Molecule:phenol hydroxylase component phl;
PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex
21c5fztB_
not modelled 8.6 40
PDB header:structural protein
Chain: B: PDB Molecule:rho gtpase-activating protein 7;
PDBTitle: the crystal structure of r7r8 in complex with a dlc12 fragment.
22d1gjja2
not modelled 7.4 60
Fold:LEM/SAP HeH motif
Superfamily:LEM domain
Family:LEM domain
23c4j2lD_
not modelled 6.9 33
PDB header:transcription regulator
Chain: D: PDB Molecule:protein capicua homolog;
PDBTitle: crystal structure of axh domain complexed with capicua
24c4j2lC_
not modelled 6.9 33
PDB header:transcription regulator
Chain: C: PDB Molecule:protein capicua homolog;
PDBTitle: crystal structure of axh domain complexed with capicua
25c3zwzB_
not modelled 6.9 57
PDB header:immune system
Chain: B: PDB Molecule:rhoptry neck protein 2;
PDBTitle: crystal structure of plasmodium falciparum ama1 in complex with a2 39aa pfron2 peptide
26c2q1kA_
not modelled 6.3 38
PDB header:chaperone
Chain: A: PDB Molecule:asce;
PDBTitle: cyrstal structure of asce from aeromonas hydrophilla
27d1v7ba2
not modelled 6.0 17
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
28d1h9fa_
not modelled 5.9 60
Fold:LEM/SAP HeH motif
Superfamily:LEM domain
Family:LEM domain

Binding site prediction 

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