Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0352_(dnaJ1)_422452_423639
DateTue Jul 23 14:50:42 BST 2019
Unique Job IDa248571bbb909aca
SequenceMAQREWVEKD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:73.828 Y:106.772 Z:53.056
Model (left) based on template c4j80B_
Top template information
PDB header:chaperone
Chain: B: PDB Molecule:chaperone protein dnaj 2;
PDBTitle: thermus thermophilus dnaj
Confidence and coverage
Confidence:100.0% Coverage: 68%
269 residues ( 68% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
371 residues ( 94%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j80B_
100.0 37
PDB header:chaperone
Chain: B: PDB Molecule:chaperone protein dnaj 2;
PDBTitle: thermus thermophilus dnaj
2c1nltA_
100.0 32
PDB header:protein transport
Chain: A: PDB Molecule:mitochondrial protein import protein mas5;
PDBTitle: the crystal structure of hsp40 ydj1
3c3lz8A_
100.0 40
PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone dnaj from klebsiella pneumoniae2 subsp. pneumoniae mgh 78578 at 2.9 a resolution.
4c2q2gA_
100.0 24
PDB header:chaperone
Chain: A: PDB Molecule:heat shock 40 kda protein, putative (fragment);
PDBTitle: crystal structure of dimerization domain of hsp40 from2 cryptosporidium parvum, cgd2_1800
5c2qldA_
100.0 25
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 1;
PDBTitle: human hsp40 hdj1
6c2b26A_
100.0 29
PDB header:chaperone/protein transport
Chain: A: PDB Molecule:sis1 protein;
PDBTitle: the crystal structure of the protein complex of yeast hsp402 sis1 and hsp70 ssa1
7c3i38D_
99.9 36
PDB header:chaperone
Chain: D: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
8c3apqB_
99.9 42
PDB header:oxidoreductase
Chain: B: PDB Molecule:dnaj homolog subfamily c member 10;
PDBTitle: crystal structure of j-trx1 fragment of erdj5
9c3i38K_
99.9 36
PDB header:chaperone
Chain: K: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
10c3i38G_
99.9 36
PDB header:chaperone
Chain: G: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
11c3i38A_
99.9 36
PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
12c3i38J_
99.9 37
PDB header:chaperone
Chain: J: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
13c3i38F_
99.9 37
PDB header:chaperone
Chain: F: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
14c3i38B_
99.9 37
PDB header:chaperone
Chain: B: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
15c3i38H_
99.9 37
PDB header:chaperone
Chain: H: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
16c3i38L_
99.9 38
PDB header:chaperone
Chain: L: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
17c3i38E_
99.9 38
PDB header:chaperone
Chain: E: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
18c3i38C_
99.9 38
PDB header:chaperone
Chain: C: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
19c4j7zC_
99.9 45
PDB header:chaperone
Chain: C: PDB Molecule:chaperone protein dnaj 2;
PDBTitle: thermus thermophilus dnaj j- and g/f-domains
20c3i38I_
99.9 38
PDB header:chaperone
Chain: I: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
21c2ctqA_
not modelled 99.9 28
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily c member 12;
PDBTitle: solution structure of j-domain from human dnaj subfamily c2 menber 12
22c2l6lA_
not modelled 99.9 29
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily c member 24;
PDBTitle: solution structure of human j-protein co-chaperone, dph4
23c2yuaA_
not modelled 99.9 34
PDB header:chaperone
Chain: A: PDB Molecule:williams-beuren syndrome chromosome region 18
PDBTitle: solution structure of the dnaj domain from human williams-2 beuren syndrome chromosome region 18 protein
24c1fpoA_
not modelled 99.9 21
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein hscb;
PDBTitle: hsc20 (hscb), a j-type co-chaperone from e. coli
25d1c3ga2
not modelled 99.9 37
Fold:HSP40/DnaJ peptide-binding domain
Superfamily:HSP40/DnaJ peptide-binding domain
Family:HSP40/DnaJ peptide-binding domain
26d1hdja_
not modelled 99.9 49
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
27c3hhoA_
not modelled 99.9 22
PDB header:chaperone
Chain: A: PDB Molecule:co-chaperone protein hscb homolog;
PDBTitle: chaperone hscb from vibrio cholerae
28c2ctwA_
not modelled 99.9 42
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily c member 5;
PDBTitle: solution structure of j-domain from mouse dnaj subfamily c2 menber 5
29c3bvoA_
not modelled 99.9 18
PDB header:chaperone
Chain: A: PDB Molecule:co-chaperone protein hscb, mitochondrial precursor;
PDBTitle: crystal structure of human co-chaperone protein hscb
30c2dmxA_
not modelled 99.8 49
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 8;
PDBTitle: solution structure of the j domain of dnaj homolog2 subfamily b member 8
31c2ctrA_
not modelled 99.8 39
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 9;
PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 9
32c5vsoA_
not modelled 99.8 50
PDB header:chaperone
Chain: A: PDB Molecule:yeast dnaj protein 1;
PDBTitle: nmr structure of ydj1 j-domain, a cytosolic hsp40 from saccharomyces2 cerevisiae
33d1xbla_
not modelled 99.8 40
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
34c1xaoA_
not modelled 99.8 21
PDB header:chaperone
Chain: A: PDB Molecule:mitochondrial protein import protein mas5;
PDBTitle: hsp40-ydj1 dimerization domain
35c2cugA_
not modelled 99.8 43
PDB header:chaperone
Chain: A: PDB Molecule:mkiaa0962 protein;
PDBTitle: solution structure of the j domain of the pseudo dnaj2 protein, mouse hypothetical mkiaa0962
36c2kqxA_
not modelled 99.8 47
PDB header:chaperone binding protein
Chain: A: PDB Molecule:curved dna-binding protein;
PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa
37c2o37A_
not modelled 99.8 41
PDB header:chaperone
Chain: A: PDB Molecule:protein sis1;
PDBTitle: j-domain of sis1 protein, hsp40 co-chaperone from saccharomyces2 cerevisiae.
38c2ctpA_
not modelled 99.8 49
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 12;
PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 12
39c5y88T_
not modelled 99.8 36
PDB header:splicing
Chain: T: PDB Molecule:pre-mrna-splicing factor cwc23;
PDBTitle: cryo-em structure of the intron-lariat spliceosome ready for2 disassembly from s.cerevisiae at 3.5 angstrom
40c2dn9A_
not modelled 99.8 47
PDB header:apoptosis, chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily a member 3;
PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein
41d1iura_
not modelled 99.8 26
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
42c2lgwA_
not modelled 99.8 46
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 2;
PDBTitle: solution structure of the j domain of hsj1a
43d1gh6a_
not modelled 99.8 18
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
44c1bq0A_
not modelled 99.8 40
PDB header:chaperone
Chain: A: PDB Molecule:dnaj;
PDBTitle: j-domain (residues 1-77) of the escherichia coli n-terminal2 fragment (residues 1-104) of the molecular chaperone dnaj,3 nmr, 20 structures
45c2qsaA_
not modelled 99.8 30
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog dnj-2;
PDBTitle: crystal structure of j-domain of dnaj homolog dnj-2 precursor from2 c.elegans.
46d1wjza_
not modelled 99.8 28
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
47c2ochA_
not modelled 99.8 51
PDB header:chaperone
Chain: A: PDB Molecule:hypothetical protein dnj-12;
PDBTitle: j-domain of dnj-12 from caenorhabditis elegans
48c2ys8A_
not modelled 99.8 44
PDB header:protein binding
Chain: A: PDB Molecule:rab-related gtp-binding protein rabj;
PDBTitle: solution structure of the dnaj-like domain from human ras-2 associated protein rap1
49c2pf4E_
not modelled 99.8 21
PDB header:hydrolase regulator/viral protein
Chain: E: PDB Molecule:small t antigen;
PDBTitle: crystal structure of the full-length simian virus 40 small t antigen2 complexed with the protein phosphatase 2a aalpha subunit
50d1nlta2
not modelled 99.7 28
Fold:HSP40/DnaJ peptide-binding domain
Superfamily:HSP40/DnaJ peptide-binding domain
Family:HSP40/DnaJ peptide-binding domain
51c2cttA_
not modelled 99.7 37
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily a member 3;
PDBTitle: solution structure of zinc finger domain from human dnaj2 subfamily a menber 3
52d1fpoa1
not modelled 99.7 24
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
53d1fafa_
not modelled 99.7 11
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
54d1c3ga1
not modelled 99.6 24
Fold:HSP40/DnaJ peptide-binding domain
Superfamily:HSP40/DnaJ peptide-binding domain
Family:HSP40/DnaJ peptide-binding domain
55d1n4ca_
not modelled 99.6 26
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
56d1nz6a_
not modelled 99.6 26
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
57c2guzO_
not modelled 99.5 24
PDB header:chaperone, protein transport
Chain: O: PDB Molecule:mitochondrial import inner membrane translocase subunit
PDBTitle: structure of the tim14-tim16 complex of the mitochondrial protein2 import motor
58c2y4tA_
not modelled 99.4 40
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily c member 3;
PDBTitle: crystal structure of the human co-chaperone p58(ipk)
59c3apoA_
not modelled 99.4 50
PDB header:oxidoreductase
Chain: A: PDB Molecule:dnaj homolog subfamily c member 10;
PDBTitle: crystal structure of full-length erdj5
60d1exka_
not modelled 99.3 44
Fold:DnaJ/Hsp40 cysteine-rich domain
Superfamily:DnaJ/Hsp40 cysteine-rich domain
Family:DnaJ/Hsp40 cysteine-rich domain
61d1nlta1
not modelled 99.3 36
Fold:HSP40/DnaJ peptide-binding domain
Superfamily:HSP40/DnaJ peptide-binding domain
Family:HSP40/DnaJ peptide-binding domain
62c3ag7A_
not modelled 99.3 18
PDB header:plant protein
Chain: A: PDB Molecule:putative uncharacterized protein f9e10.5;
PDBTitle: an auxilin-like j-domain containing protein, jac1 j-domain
63c2guzD_
not modelled 99.2 15
PDB header:chaperone, protein transport
Chain: D: PDB Molecule:mitochondrial import inner membrane translocase subunit
PDBTitle: structure of the tim14-tim16 complex of the mitochondrial protein2 import motor
64d1nlta3
not modelled 98.9 34
Fold:DnaJ/Hsp40 cysteine-rich domain
Superfamily:DnaJ/Hsp40 cysteine-rich domain
Family:DnaJ/Hsp40 cysteine-rich domain
65c3uo2A_
not modelled 98.8 21
PDB header:chaperone
Chain: A: PDB Molecule:j-type co-chaperone jac1, mitochondrial;
PDBTitle: jac1 co-chaperone from saccharomyces cerevisiae
66c6ekbA_
not modelled 97.8 34
PDB header:chaperone
Chain: A: PDB Molecule:dnaj/hsp40 cysteine-rich domain superfamily protein;
PDBTitle: crystal structure of the bsd2 homolog of arabidopsis thaliana
67c6nd1A_
not modelled 95.2 5
PDB header:protein transport
Chain: A: PDB Molecule:protein translocation protein sec63;
PDBTitle: cryoem structure of the sec complex from yeast
68c4wb7B_
not modelled 95.1 56
PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:dnaj homolog subfamily b member 1,camp-dependent protein
PDBTitle: crystal structure of a chimeric fusion of human dnaj (hsp40) and camp-2 dependent protein kinase a (catalytic alpha subunit)
69c2k3vA_
not modelled 95.0 22
PDB header:electron transport
Chain: A: PDB Molecule:tetraheme cytochrome c-type;
PDBTitle: solution structure of a tetrahaem cytochrome from2 shewanella frigidimarina
70c3ld0Q_
not modelled 92.4 39
PDB header:gene regulation
Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa;
PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions
71c4mo1B_
not modelled 91.0 48
PDB header:transcription regulator
Chain: B: PDB Molecule:antitermination protein q;
PDBTitle: crystal structure of antitermination protein q from bacteriophage2 lambda. northeast structural genomics consortium target or18a.
72d2fiya1
not modelled 80.8 15
Fold:FdhE-like
Superfamily:FdhE-like
Family:FdhE-like
73c5z5mB_
not modelled 79.2 27
PDB header:lyase
Chain: B: PDB Molecule:predicted protein;
PDBTitle: crystal structure of (s)-allantoin synthase
74c2bx9J_
not modelled 74.1 36
PDB header:transcription regulation
Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory
PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
75c3pihA_
not modelled 73.7 25
PDB header:hydrolase/dna
Chain: A: PDB Molecule:uvrabc system protein a;
PDBTitle: t. maritima uvra in complex with fluorescein-modified dna
76d2q37a1
not modelled 57.0 13
Fold:UraD-like
Superfamily:UraD-Like
Family:UraD-like
77c2q37A_
not modelled 57.0 13
PDB header:plant protein, lyase
Chain: A: PDB Molecule:ohcu decarboxylase;
PDBTitle: crystal structure of ohcu decarboxylase in the presence of2 (s)-allantoin
78c4kssC_
not modelled 55.3 30
PDB header:protein transport
Chain: C: PDB Molecule:type ii secretion system protein e, hemolysin-coregulated
PDBTitle: crystal structure of vibrio cholerae atpase gspse hexamer
79c4ptsB_
not modelled 52.3 29
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase;
PDBTitle: crystal structure of a glutathione transferase from gordonia2 bronchialis dsm 43247, target efi-507405
80c5ijlA_
not modelled 52.2 20
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
81c3m1gC_
not modelled 51.0 29
PDB header:transferase
Chain: C: PDB Molecule:putative glutathione s-transferase;
PDBTitle: the structure of a putative glutathione s-transferase from2 corynebacterium glutamicum
82d1ug2a_
not modelled 50.0 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain
83c4m5dB_
not modelled 46.5 14
PDB header:rna binding protein
Chain: B: PDB Molecule:ribosomal rna-processing protein 7;
PDBTitle: crystal structure of the utp22 and rrp7 complex from saccharomyces2 cerevisiae
84c2qkdA_
not modelled 45.9 23
PDB header:signaling protein, cell cycle
Chain: A: PDB Molecule:zinc finger protein zpr1;
PDBTitle: crystal structure of tandem zpr1 domains
85d2o8ia1
not modelled 45.4 27
Fold:UraD-like
Superfamily:UraD-Like
Family:UraD-like
86c6gbhA_
not modelled 41.7 21
PDB header:cell adhesion
Chain: A: PDB Molecule:hopq;
PDBTitle: helicobacter pylori adhesin hopq type ii bound to the n-terminal2 domain of human ceacam1
87c6gzfB_
not modelled 41.4 32
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase;
PDBTitle: xi class gst from natrialba magadii
88d3saka_
not modelled 41.0 33
Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
89c6hmsB_
not modelled 40.6 21
PDB header:replication
Chain: B: PDB Molecule:dna polymerase ii large subunit,dna polymerase ii large
PDBTitle: cryo-em map of dna polymerase d from pyrococcus abyssi in complex with2 dna
90c4phtC_
not modelled 40.4 23
PDB header:protein transport
Chain: C: PDB Molecule:general secretory pathway protein e;
PDBTitle: atpase gspe in complex with the cytoplasmic domain of gspl from the2 vibrio vulnificus type ii secretion system
91c5lp2B_
not modelled 40.1 29
PDB header:cell adhesion
Chain: B: PDB Molecule:hopq;
PDBTitle: adhesin domain of the type 1 hopq of helicobacter pylori strain g27
92c4ht4A_
not modelled 40.0 11
PDB header:hydrolase/dna
Chain: A: PDB Molecule:nicking enzyme;
PDBTitle: molecular basis of vancomycin resistance transfer in staphylococcus2 aureus
93d2zjrq1
not modelled 37.8 30
Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L23p
94c3dkqB_
not modelled 37.5 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634;
PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution
95c2co9A_
not modelled 37.4 24
PDB header:transcription
Chain: A: PDB Molecule:thymus high mobility group box protein tox;
PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse
96c2ww9K_
not modelled 35.7 41
PDB header:ribosome
Chain: K: PDB Molecule:60s ribosomal protein l25;
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the yeast2 80s ribosome
97c3j21T_
not modelled 35.4 35
PDB header:ribosome
Chain: T: PDB Molecule:50s ribosomal protein l23p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
98d1vqos1
not modelled 34.8 29
Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:L23p
99c6g6gH_
not modelled 34.7 26
PDB header:de novo protein
Chain: H: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
100c6g6gB_
not modelled 34.7 26
PDB header:de novo protein
Chain: B: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
101c6g6gD_
not modelled 34.7 26
PDB header:de novo protein
Chain: D: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
102c6g6gF_
not modelled 34.7 26
PDB header:de novo protein
Chain: F: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
103c6g6gC_
not modelled 34.7 26
PDB header:de novo protein
Chain: C: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
104c6g6gJ_
not modelled 34.7 26
PDB header:de novo protein
Chain: J: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
105c6g6gK_
not modelled 34.7 26
PDB header:de novo protein
Chain: K: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
106c6g6gE_
not modelled 34.7 26
PDB header:de novo protein
Chain: E: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
107c5a48B_
not modelled 34.7 50
PDB header:protein binding
Chain: B: PDB Molecule:maternal effect protein oskar;
PDBTitle: crystal structure of the lotus domain (aa 139-240) of drosophila2 oskar in p65
108c1wz6A_
not modelled 34.5 31
PDB header:transcription
Chain: A: PDB Molecule:hmg-box transcription factor bbx;
PDBTitle: solution structure of the hmg_box domain of murine bobby2 sox homolog
109d2o70a1
not modelled 33.8 17
Fold:UraD-like
Superfamily:UraD-Like
Family:UraD-like
110c3c4rC_
not modelled 33.6 36
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein encoded by2 cryptic prophage
111c6g6gL_
not modelled 33.6 25
PDB header:de novo protein
Chain: L: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
112c6g6gG_
not modelled 33.6 25
PDB header:de novo protein
Chain: G: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
113c6g6gA_
not modelled 33.6 25
PDB header:de novo protein
Chain: A: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
114c6g6gI_
not modelled 33.6 25
PDB header:de novo protein
Chain: I: PDB Molecule:cc-type2-fi;
PDBTitle: crystal structure of a parallel six-helix coiled coil cc-type2-fi
115c2cs1A_
not modelled 31.9 17
PDB header:dna binding protein
Chain: A: PDB Molecule:pms1 protein homolog 1;
PDBTitle: solution structure of the hmg domain of human dna mismatch2 repair protein
116c2ns6A_
not modelled 31.4 21
PDB header:hydrolase
Chain: A: PDB Molecule:mobilization protein a;
PDBTitle: crystal structure of the minimal relaxase domain of moba from plasmid2 r1162
117c4x3xA_
not modelled 30.9 58
PDB header:signaling protein
Chain: A: PDB Molecule:activity-regulated cytoskeleton-associated protein;
PDBTitle: the crystal structure of arc c-lobe
118c4b6aX_
not modelled 29.6 41
PDB header:ribosome
Chain: X: PDB Molecule:60s ribosomal protein l25;
PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1
119d1cf7a_
not modelled 29.4 33
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Cell cycle transcription factor e2f-dp
120c2go54_
not modelled 29.3 35
PDB header:translation/rna
Chain: 4: PDB Molecule:ribosomal protein l23;
PDBTitle: structure of signal recognition particle receptor (sr) in2 complex with signal recognition particle (srp) and3 ribosome nascent chain complex

Binding site prediction 

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