Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0355c_(PPE8)_424778_434680
DateTue Jul 23 14:50:42 BST 2019
Unique Job IDd4d863a0037eef76
SequenceMSFAVLPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.074 Y:70.859 Z:69.512
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 5%
172 residues ( 5% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
351 residues ( 11%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 85% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_



100.0 55
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1



100.0 34
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_



100.0 34
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_



100.0 18
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c2vs0B_



96.8 10
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
6c4iogD_



96.8 17
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
7c4wj2A_



96.7 18
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
8c3gvmA_



96.4 10
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_



96.1 16
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1



95.0 20
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c5nxhB_



91.1 12
PDB header:viral protein
Chain: B: PDB Molecule:long-tail fiber proximal subunit;
PDBTitle: crystal structure of the carboxy-terminal region of the bacteriophage2 t4 proximal long tail fibre protein gp34, residues 744-1289 at 2.93 angstrom resolution
12c3jywF_



88.1 46
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
13c4i0xA_



84.5 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
14c2vsnB_



82.8 21
PDB header:transferase
Chain: B: PDB Molecule:xcogt;
PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation
15c4lwsA_



80.9 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
16d1wa8b1



80.1 21
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
17d1ui5a2



70.9 18
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
18d1rp4a_



64.6 16
Fold:ERO1-like
Superfamily:ERO1-like
Family:ERO1-like
19c4lwsB_



61.4 13
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
20c3pe3D_



60.4 18
PDB header:transferase
Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n-
PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
21c3lhoA_



not modelled 60.1 44
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative hydrolase (yp_751971.1) from shewanella2 frigidimarina ncimb 400 at 1.80 a resolution
22c5djsA_



not modelled 58.2 19
PDB header:transferase
Chain: A: PDB Molecule:tetratricopeptide tpr_2 repeat protein;
PDBTitle: thermobaculum terrenum o-glcnac transferase mutant - k341m
23c2kg7B_



not modelled 57.5 19
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
24c3ahrA_



not modelled 56.4 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:ero1-like protein alpha;
PDBTitle: inactive human ero1
25c4rqoB_



not modelled 54.7 18
PDB header:lyase
Chain: B: PDB Molecule:l-serine dehydratase;
PDBTitle: crystal structure of l-serine dehydratase from legionella pneumophila
26d3cx5d1



not modelled 54.4 40
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
27d1ppjd1



not modelled 53.1 35
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
28c5azaA_



not modelled 52.8 19
PDB header:sugar binding protein, transferase
Chain: A: PDB Molecule:maltose-binding periplasmic protein,oligosaccharyl
PDBTitle: crystal structure of mbp-saglb fusion protein with a 20-residue spacer2 in the connector helix
29c4f9iA_



not modelled 52.7 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:proline dehydrogenase/delta-1-pyrroline-5-carboxylate
PDBTitle: crystal structure of proline utilization a (puta) from geobacter2 sulfurreducens pca
30c4jzaB_



not modelled 51.4 41
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a legionella phosphoinositide phosphatase:2 insights into lipid metabolism in pathogen host interaction
31c1zrtD_



not modelled 46.3 50
PDB header:oxidoreductase/metal transport
Chain: D: PDB Molecule:cytochrome c1;
PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound
32c6ghrF_



not modelled 46.2 59
PDB header:photosynthesis
Chain: F: PDB Molecule:cp12 polypeptide;
PDBTitle: cyanobacterial gapdh with full-length cp12
33d1exta3



not modelled 45.2 57
Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:TNF receptor-like
34d1ncfb3



not modelled 45.1 57
Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:TNF receptor-like
35c6fhjA_



not modelled 44.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:protein,protein;
PDBTitle: structural dynamics and catalytic properties of a multi-modular2 xanthanase, native.
36c3fpjA_



not modelled 44.3 17
PDB header:biosynthetic protein, transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of e81q mutant of mtnas in complex with s-2 adenosylmethionine
37c3cwbQ_



not modelled 44.1 35
PDB header:oxidoreductase
Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein;
PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d
38c1qcrD_



not modelled 43.2 35
PDB header:oxidoreductase
Chain: D: PDB Molecule:ubiquinol cytochrome c oxidoreductase;
PDBTitle: crystal structure of bovine mitochondrial cytochrome bc12 complex, alpha carbon atoms only
39c3b5oA_



not modelled 42.9 50
PDB header:oxidoreductase
Chain: A: PDB Molecule:cadd-like protein of unknown function;
PDBTitle: crystal structure of a cadd-like protein of unknown function2 (npun_f6505) from nostoc punctiforme pcc 73102 at 1.35 a resolution
40d2a15a1



not modelled 42.7 21
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
41c3qx3B_



not modelled 42.4 35
PDB header:isomerase/dna/isomerase inhibitor
Chain: B: PDB Molecule:dna topoisomerase 2-beta;
PDBTitle: human topoisomerase iibeta in complex with dna and etoposide
42c4nl6C_



not modelled 42.4 71
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
43c4yfbD_



not modelled 42.3 24
PDB header:hydrolase
Chain: D: PDB Molecule:protein related to penicillin acylase;
PDBTitle: structure of n-acylhomoserine lactone acylase macq in complex with2 phenylacetic acid
44c6fhnA_



not modelled 42.2 18
PDB header:hydrolase
Chain: A: PDB Molecule:protein;
PDBTitle: structural dynamics and catalytic properties of a multi-modular2 xanthanase (pt derivative)
45c4fm9A_



not modelled 42.0 30
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 2-alpha;
PDBTitle: human topoisomerase ii alpha bound to dna
46d1xkna_



not modelled 41.7 14
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
47d2fr1a1



not modelled 40.6 20
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
48c4lrvL_



not modelled 40.5 40
PDB header:dna binding protein
Chain: L: PDB Molecule:dna sulfur modification protein dnde;
PDBTitle: crystal structure of dnde from escherichia coli b7a involved in dna2 phosphorothioation modification
49d1byra_



not modelled 38.5 28
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Nuclease
50c2yiuE_



not modelled 38.2 50
PDB header:oxidoreductase
Chain: E: PDB Molecule:cytochrome c1, heme protein;
PDBTitle: x-ray structure of the dimeric cytochrome bc1 complex from2 the soil bacterium paracoccus denitrificans at 2.73 angstrom resolution
51d1de4c2



not modelled 37.7 3
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:PA domain
Family:PA domain
52c4urjA_



not modelled 37.3 13
PDB header:unknown function
Chain: A: PDB Molecule:protein fam83a;
PDBTitle: crystal structure of human bj-tsa-9
53c4q7oA_



not modelled 37.1 38
PDB header:immune system
Chain: A: PDB Molecule:immunity protein;
PDBTitle: the crystal structure of an immunity protein nmb0503 from neisseria2 meningitidis mc58
54d2gxfa1



not modelled 36.9 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:YybH-like
55c1p84D_



not modelled 36.7 40
PDB header:oxidoreductase
Chain: D: PDB Molecule:cytochrome c1, heme protein;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
56d1luaa2



not modelled 36.4 18
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Methylene-tetrahydromethanopterin dehydrogenase
57c5lzkB_



not modelled 36.3 4
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
58c5aizA_



not modelled 35.2 15
PDB header:zinc-binding protein
Chain: A: PDB Molecule:zinc finger miz domain-containing protein 1;
PDBTitle: the pias-like coactivator zmiz1 is a direct and selective cofactor2 of notch1 in t-cell development and leukemia
59c3vohA_



not modelled 34.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:cellobiohydrolase;
PDBTitle: cccel6a catalytic domain complexed with cellobiose
60c2vakF_



not modelled 34.9 27
PDB header:viral protein
Chain: F: PDB Molecule:sigma a;
PDBTitle: crystal structure of the avian reovirus inner capsid protein sigmaa
61c2pheC_



not modelled 34.7 31
PDB header:transcription
Chain: C: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to pc4
62c2fynH_



not modelled 34.6 35
PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c1;
PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex
63c2jg7G_



not modelled 34.0 16
PDB header:oxidoreductase
Chain: G: PDB Molecule:antiquitin;
PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity
64c2wybA_



not modelled 33.5 15
PDB header:hydrolase
Chain: A: PDB Molecule:acyl-homoserine lactone acylase pvdq subunit
PDBTitle: the quorum quenching n-acyl homoserine lactone acylase pvdq2 with a covalently bound dodecanoic acid
65c3pefA_



not modelled 32.9 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding;
PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+
66c2k2uB_



not modelled 32.7 31
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: nmr structure of the complex between tfb1 subunit of tfiih2 and the activation domain of vp16
67c2wk1A_



not modelled 32.3 28
PDB header:transferase
Chain: A: PDB Molecule:novp;
PDBTitle: structure of the o-methyltransferase novp
68d3cu3a1



not modelled 32.3 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
69c3rf7A_



not modelled 31.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:iron-containing alcohol dehydrogenase;
PDBTitle: crystal structure of an iron-containing alcohol dehydrogenase2 (sden_2133) from shewanella denitrificans os-217 at 2.12 a resolution
70c5kf6B_



not modelled 31.8 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:bifunctional protein puta;
PDBTitle: structure of proline utilization a from sinorhizobium meliloti2 complexed with l-tetrahydrofuroic acid and nad+ in space group p21
71d1bjta_



not modelled 31.6 22
Fold:Type II DNA topoisomerase
Superfamily:Type II DNA topoisomerase
Family:Type II DNA topoisomerase
72c1bjtA_



not modelled 31.6 22
PDB header:topoisomerase
Chain: A: PDB Molecule:topoisomerase ii;
PDBTitle: topoisomerase ii residues 409-1201
73c3hx8A_



not modelled 30.9 23
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (np_103587.1) from2 mesorhizobium loti at 1.45 a resolution
74c3s8mA_



not modelled 30.5 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:enoyl-acp reductase;
PDBTitle: the crystal structure of fabv
75d1joga_



not modelled 30.0 17
Fold:Four-helical up-and-down bundle
Superfamily:Nucleotidyltransferase substrate binding subunit/domain
Family:Family 1 bi-partite nucleotidyltransferase subunit
76c6iz9B_



not modelled 29.9 15
PDB header:transferase
Chain: B: PDB Molecule:beta-transaminase;
PDBTitle: crystal structure of the apo form of a beta-transaminase from2 mesorhizobium sp. strain luk
77c4gfhA_



not modelled 29.9 23
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 2;
PDBTitle: topoisomerase ii-dna-amppnp complex
78d1jpdx2



not modelled 29.9 21
Fold:Enolase N-terminal domain-like
Superfamily:Enolase N-terminal domain-like
Family:Enolase N-terminal domain-like
79c2ve5H_



not modelled 29.6 15
PDB header:oxidoreductase
Chain: H: PDB Molecule:betaine aldehyde dehydrogenase;
PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa
80c3q3hA_



not modelled 29.0 13
PDB header:transferase
Chain: A: PDB Molecule:hmw1c-like glycosyltransferase;
PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc
81d1vkpa_



not modelled 28.7 28
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
82d1bvsa1



not modelled 28.0 39
Fold:RuvA C-terminal domain-like
Superfamily:DNA helicase RuvA subunit, C-terminal domain
Family:DNA helicase RuvA subunit, C-terminal domain
83d1oy0a_



not modelled 27.8 23
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Ketopantoate hydroxymethyltransferase PanB
84c3r8rJ_



not modelled 27.0 16
PDB header:transferase
Chain: J: PDB Molecule:transaldolase;
PDBTitle: transaldolase from bacillus subtilis
85c6ajrA_



not modelled 27.0 27
PDB header:dna binding protein
Chain: A: PDB Molecule:uracil dna glycosylase superfamily protein;
PDBTitle: complex form of uracil dna glycosylase x and uracil
86c2v7iA_



not modelled 27.0 29
PDB header:biosynthetic protein
Chain: A: PDB Molecule:prnb;
PDBTitle: prnb native
87c3hazA_



not modelled 26.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:proline dehydrogenase;
PDBTitle: crystal structure of bifunctional proline utilization a2 (puta) protein
88c3ly8A_



not modelled 26.4 14
PDB header:signaling protein
Chain: A: PDB Molecule:transcriptional activator cadc;
PDBTitle: crystal structure of mutant d471e of the periplasmic domain of cadc
89d2rh3a1



not modelled 26.1 24
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:VirC2-like
90c2phgB_



not modelled 26.0 31
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to tfiib
91d1vefa1



not modelled 25.9 18
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
92c4xvzB_



not modelled 25.7 28
PDB header:transferase
Chain: B: PDB Molecule:mycinamicin iii 3''-o-methyltransferase;
PDBTitle: mycf mycinamicin iii 3'-o-methyltransferase in complex with mg
93c3sdoB_



not modelled 25.7 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrilotriacetate monooxygenase;
PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei
94c2ordA_



not modelled 25.6 16
PDB header:transferase
Chain: A: PDB Molecule:acetylornithine aminotransferase;
PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
95c4h7nA_



not modelled 25.5 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: the structure of putative aldehyde dehydrogenase puta from anabaena2 variabilis.
96c6ca8A_



not modelled 25.4 23
PDB header:isomerase
Chain: A: PDB Molecule:dna topoisomerase 2;
PDBTitle: crystal structure of plasmodium falciparum topoisomerase ii dna-2 binding, cleavage and re-ligation domain
97d1c9ka_



not modelled 25.3 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
98c4i3wC_



not modelled 25.2 26
PDB header:oxidoreductase
Chain: C: PDB Molecule:aldehyde dehydrogenase (nad+);
PDBTitle: structure of phosphonoacetaldehyde dehydrogenase in complex with2 gylceraldehyde-3-phosphate and cofactor nad+
99c3r5zB_



not modelled 25.2 22
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
100c3u4jB_



not modelled 24.9 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent aldehyde dehydrogenase;
PDBTitle: crystal structure of nad-dependent aldehyde dehydrogenase from2 sinorhizobium meliloti
101c2axtc_



not modelled 24.8 35
PDB header:electron transport
Chain: C: PDB Molecule:photosystem ii cp43 protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
102d2axtc1



not modelled 24.8 35
Fold:Photosystem II antenna protein-like
Superfamily:Photosystem II antenna protein-like
Family:Photosystem II antenna protein-like
103d1tpla_



not modelled 24.8 16
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Beta-eliminating lyases
104c6cboB_



not modelled 24.5 23
PDB header:transferase
Chain: B: PDB Molecule:c-6' aminotransferase;
PDBTitle: x-ray structure of genb1 from micromonospora echinospora in complex2 with neamine and plp (as the external aldimine)
105d1vpxa_



not modelled 24.5 11
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
106d2ewoa1



not modelled 24.4 28
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
107c3kb4D_



not modelled 24.3 19
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr8543 protein;
PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141
108c5frgA_



not modelled 24.3 63
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
109d1wx0a1



not modelled 24.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
110c2h7fX_



not modelled 24.0 18
PDB header:isomerase/dna
Chain: X: PDB Molecule:dna topoisomerase 1;
PDBTitle: structure of variola topoisomerase covalently bound to dna
111c3k66A_



not modelled 23.7 26
PDB header:cell adhesion
Chain: A: PDB Molecule:beta-amyloid-like protein;
PDBTitle: x-ray crystal structure of the e2 domain of c. elegans apl-1
112c5mqrA_



not modelled 23.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:beta-l-arabinobiosidase;
PDBTitle: sialidase bt_1020
113c3fyqA_



not modelled 23.3 17
PDB header:cell adhesion
Chain: A: PDB Molecule:cg6831-pa (talin);
PDBTitle: structure of drosophila melanogaster talin ibs2 domain (residues 1981-2 2168)
114c5cgaC_



not modelled 23.3 19
PDB header:transferase
Chain: C: PDB Molecule:hydroxyethylthiazole kinase;
PDBTitle: structure of hydroxyethylthiazole kinase thim from staphylococcus2 aureus in complex with substrate analog 2-(1,3,5-trimethyl-1h-3 pyrazole-4-yl)ethanol
115c4evxA_



not modelled 23.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative phage endolysin;
PDBTitle: crystal structure of putative phage endolysin from s. enterica
116d2f7fa1



not modelled 23.1 19
Fold:TIM beta/alpha-barrel
Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like
Family:NadC C-terminal domain-like
117c2yikA_



not modelled 23.0 10
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: catalytic domain of clostridium thermocellum celt
118c2nwqA_



not modelled 23.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable short-chain dehydrogenase;
PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa
119c5jn6A_



not modelled 22.9 89
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the nmr solution structure of rpa3313
120d1yymg1



not modelled 22.9 33
Fold:gp120 core
Superfamily:gp120 core
Family:gp120 core

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below