Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0373c_(-)_449405_451804
DateTue Jul 23 14:50:44 BST 2019
Unique Job ID9ef1c4c7fb5e9e8b
SequenceMTTIESRPPS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:72.320 Y:75.757 Z:91.849
Model (left) based on template c1ffvB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava
Confidence and coverage
Confidence:100.0% Coverage: 96%
769 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ffvB_
100.0 59
PDB header:hydrolase
Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava
2c1n62E_
100.0 57
PDB header:oxidoreductase
Chain: E: PDB Molecule:carbon monoxide dehydrogenase large chain;
PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state
3c1t3qB_
100.0 38
PDB header:oxidoreductase
Chain: B: PDB Molecule:quinoline 2-oxidoreductase large subunit;
PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86
4c1sb3D_
100.0 28
PDB header:oxidoreductase
Chain: D: PDB Molecule:4-hydroxybenzoyl-coa reductase alpha subunit;
PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica
5c1wygA_
100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s)
6c2w54F_
100.0 24
PDB header:oxidoreductase
Chain: F: PDB Molecule:xanthine dehydrogenase;
PDBTitle: crystal structure of xanthine dehydrogenase from rhodobacter2 capsulatus in complex with bound inhibitor pterin-6-aldehyde
7c4uhxA_
100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidase;
PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine
8c5y6qC_
100.0 26
PDB header:oxidoreductase
Chain: C: PDB Molecule:aldehyde oxidase large subunit;
PDBTitle: crystal structure of an aldehyde oxidase from methylobacillus sp.2 ky4400
9c3zyvA_
100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:aox3;
PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3)
10c3eubL_
100.0 21
PDB header:oxidoreductase
Chain: L: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine
11c5g5hC_
100.0 24
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative xanthine dehydrogenase yagr molybdenum-binding
PDBTitle: escherichia coli periplasmic aldehyde oxidase r440h mutant
12c1vlbA_
100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a
13c1dgjA_
100.0 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774
14c4zohA_
100.0 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase molybdopterin-binding subunit;
PDBTitle: crystal structure of glyceraldehyde oxidoreductase
15d1n62b2
100.0 57
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
16d1ffvb2
100.0 61
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
17d1rm6a2
100.0 26
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
18d1t3qb2
100.0 37
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
19d1jrob2
100.0 22
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
20d1v97a5
100.0 20
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
21d1vlba4
not modelled 100.0 25
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
22d1dgja4
not modelled 100.0 24
Fold:Molybdenum cofactor-binding domain
Superfamily:Molybdenum cofactor-binding domain
Family:Molybdenum cofactor-binding domain
23c3hrdE_
not modelled 100.0 26
PDB header:oxidoreductase
Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin
PDBTitle: crystal structure of nicotinate dehydrogenase
24c3hrdF_
not modelled 100.0 31
PDB header:oxidoreductase
Chain: F: PDB Molecule:nicotinate dehydrogenase medium molybdopterin
PDBTitle: crystal structure of nicotinate dehydrogenase
25d1t3qb1
not modelled 100.0 43
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
26d1ffvb1
not modelled 100.0 54
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
27d1n62b1
not modelled 100.0 58
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
28d1v97a3
not modelled 100.0 24
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
29d3b9jc1
not modelled 100.0 26
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
30d1rm6a1
not modelled 100.0 37
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
31d1jrob1
not modelled 100.0 33
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
32d1vlba3
not modelled 100.0 33
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
33d1dgja3
not modelled 100.0 31
Fold:alpha/beta-Hammerhead
Superfamily:CO dehydrogenase molybdoprotein N-domain-like
Family:CO dehydrogenase molybdoprotein N-domain-like
34d1gd0a_
not modelled 75.3 15
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
35d2gdga1
not modelled 74.4 14
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
36d1hfoa_
not modelled 74.2 13
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
37d1uiza_
not modelled 74.0 11
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
38c5un4C_
not modelled 72.8 12
PDB header:hydrolase
Chain: C: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of native fused 4-ot
39c4dh4A_
not modelled 70.6 18
PDB header:isomerase
Chain: A: PDB Molecule:mif;
PDBTitle: macrophage migration inhibitory factor toxoplasma gondii
40d1fima_
not modelled 69.4 14
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
41d1yh5a1
not modelled 69.0 4
Fold:YggU-like
Superfamily:YggU-like
Family:YggU-like
42c6cuqB_
not modelled 67.2 11
PDB header:cytokine
Chain: B: PDB Molecule:macrophage migration inhibitory factor-like protein;
PDBTitle: crystal structure of macrophage migration inhibitory factor-like2 protein (ehmif) from entamoeba histolytica
43d1dgja1
not modelled 65.7 8
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
44c2xczA_
not modelled 65.6 10
PDB header:immune system
Chain: A: PDB Molecule:possible atls1-like light-inducible protein;
PDBTitle: crystal structure of macrophage migration inhibitory factor homologue2 from prochlorococcus marinus
45c2os5C_
not modelled 64.7 10
PDB header:cytokine
Chain: C: PDB Molecule:acemif;
PDBTitle: macrophage migration inhibitory factor from ancylostoma ceylanicum
46c3gacD_
not modelled 64.2 19
PDB header:cytokine
Chain: D: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: structure of mif with hpp
47c3b64A_
not modelled 62.4 13
PDB header:cytokine
Chain: A: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
48c2rghA_
not modelled 61.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-glycerophosphate oxidase;
PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
49d2dt5a1
not modelled 60.8 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional repressor Rex, N-terminal domain
50c5unqF_
not modelled 60.8 5
PDB header:hydrolase
Chain: F: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of pt0534 inactivated by 2-oxo-3-pentynoate
51d1dpta_
not modelled 59.0 12
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
52c4lkbA_
not modelled 58.3 16
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein alr4568/putative 4-oxalocrotonate
PDBTitle: crystal structure of a putative 4-oxalocrotonate tautomerase from2 nostoc sp. pcc 7120
53c3fwtA_
not modelled 57.0 14
PDB header:cytokine
Chain: A: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: crystal structure of leishmania major mif2
54d1otfa_
not modelled 52.6 14
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
55c3abfB_
not modelled 52.3 11
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242)
56c3ry0A_
not modelled 51.6 17
PDB header:isomerase
Chain: A: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway
57d1mwwa_
not modelled 51.1 16
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:Hypothetical protein HI1388.1
58c2op8A_
not modelled 51.0 14
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase ywhb;
PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase
59c4fazB_
not modelled 49.2 19
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate isomerase protein;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
60c4fdxB_
not modelled 49.0 14
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonase tautomerase isozyme;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
61d1vlba1
not modelled 48.9 11
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
62d1bjpa_
not modelled 48.4 14
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
63d2aala1
not modelled 47.3 18
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MSAD-like
64c2dt5A_
not modelled 46.8 12
PDB header:dna binding protein
Chain: A: PDB Molecule:at-rich dna-binding protein;
PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8
65c2lfcA_
not modelled 46.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit;
PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j
66c3n2oA_
not modelled 44.1 22
PDB header:lyase
Chain: A: PDB Molecule:biosynthetic arginine decarboxylase;
PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus
67c3m20A_
not modelled 43.7 17
PDB header:isomerase
Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative;
PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution
68c2kwpA_
not modelled 43.6 27
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation protein nusa;
PDBTitle: solution structure of the aminoterminal domain of e. coli nusa
69d1knwa2
not modelled 43.0 18
Fold:TIM beta/alpha-barrel
Superfamily:PLP-binding barrel
Family:Alanine racemase-like, N-terminal domain
70c3mlcC_
not modelled 42.1 12
PDB header:isomerase
Chain: C: PDB Molecule:fg41 malonate semialdehyde decarboxylase;
PDBTitle: crystal structure of fg41msad inactivated by 3-chloropropiolate
71d1hh2p4
not modelled 42.0 36
Fold:Transcription factor NusA, N-terminal domain
Superfamily:Transcription factor NusA, N-terminal domain
Family:Transcription factor NusA, N-terminal domain
72c4aibC_
not modelled 40.9 13
PDB header:lyase
Chain: C: PDB Molecule:ornithine decarboxylase;
PDBTitle: crystal structure of ornithine decarboxylase from entamoeba2 histolytica.
73c3mb2G_
not modelled 39.1 9
PDB header:isomerase
Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit;
PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily
74c2mt4A_
not modelled 37.5 27
PDB header:transcription
Chain: A: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: solution structure of the n-terminal domain of nusa from b. subtilis
75c5wc3S_
not modelled 37.2 20
PDB header:protein transport
Chain: S: PDB Molecule:spoiiiag, stage iii sporulation engulfment assemblyprotein;
PDBTitle: spoiiiag
76c2rgoA_
not modelled 37.1 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-glycerophosphate oxidase;
PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
77c2hlhA_
not modelled 36.6 13
PDB header:transferase
Chain: A: PDB Molecule:nodulation fucosyltransferase;
PDBTitle: crystal structure of fucosyltransferase nodz from bradyrhizobium
78c2ormA_
not modelled 36.6 20
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase hp0924;
PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori.
79c2x4kB_
not modelled 36.3 16
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)
80c4gisB_
not modelled 36.2 20
PDB header:lyase
Chain: B: PDB Molecule:enolase;
PDBTitle: crystal structure of an enolase family member from vibrio harveyi2 (efi-target 501692) with homology to mannonate dehydratase, with mg,3 glycerol and dicarboxylates bound (mixed loops, space group i4122)
81c3t5sA_
not modelled 35.4 14
PDB header:immune system
Chain: A: PDB Molecule:macrophage migration inhibitory factor;
PDBTitle: structure of macrophage migration inhibitory factor from giardia2 lamblia
82d1d4ca3
not modelled 35.4 29
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
83d1o6za2
not modelled 34.3 17
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
84d1y0pa3
not modelled 33.5 18
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
85c3da1A_
not modelled 33.2 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase;
PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.
86c5uifC_
not modelled 33.1 10
PDB header:hydrolase
Chain: C: PDB Molecule:ps01740;
PDBTitle: crystal structure of native ps01740
87c3ketA_
not modelled 32.2 24
PDB header:transcription/dna
Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex;
PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator
88c3nzqB_
not modelled 30.1 27
PDB header:lyase
Chain: B: PDB Molecule:biosynthetic arginine decarboxylase;
PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600
89d1nera_
not modelled 29.8 32
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
90c3nzpA_
not modelled 29.4 15
PDB header:lyase
Chain: A: PDB Molecule:arginine decarboxylase;
PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53
91c2lteA_
not modelled 26.4 12
PDB header:transferase
Chain: A: PDB Molecule:specialized acyl carrier protein;
PDBTitle: solution nmr structure of the specialized acyl carrier protein pa33342 (apo) from pseudomonas aeruginosa, northeast structural genomics3 consortium target pat415
92d1t0aa_
not modelled 24.0 18
Fold:Bacillus chorismate mutase-like
Superfamily:IpsF-like
Family:IpsF-like
93c6aeoA_
not modelled 23.9 24
PDB header:protein transport
Chain: A: PDB Molecule:maltose/maltodextrin-binding periplasmic protein,tssl;
PDBTitle: tssl periplasmic domain
94c1l0oC_
not modelled 23.4 29
PDB header:protein binding
Chain: C: PDB Molecule:sigma factor;
PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
95d1l0oc_
not modelled 23.4 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
96c1w36E_
not modelled 23.2 22
PDB header:recombination
Chain: E: PDB Molecule:exodeoxyribonuclease v beta chain;
PDBTitle: recbcd:dna complex
97c1vraA_
not modelled 22.6 16
PDB header:transferase
Chain: A: PDB Molecule:arginine biosynthesis bifunctional protein argj;
PDBTitle: crystal structure of arginine biosynthesis bifunctional protein argj2 (10175521) from bacillus halodurans at 2.00 a resolution
98d2fmra_
not modelled 22.4 18
Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
99d2f2ab2
not modelled 22.3 17
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:GatB/GatE catalytic domain-like
100c3wg9D_
not modelled 22.2 13
PDB header:transcription
Chain: D: PDB Molecule:redox-sensing transcriptional repressor rex;
PDBTitle: crystal structure of rsp, a rex-family repressor
101d7mdha2
not modelled 21.7 11
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
102c4w8jA_
not modelled 21.3 15
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry1ac;
PDBTitle: structure of the full-length insecticidal protein cry1ac reveals2 intriguing details of toxin packaging into in vivo formed crystals
103c5ijwA_
not modelled 20.8 24
PDB header:isomerase
Chain: A: PDB Molecule:glutamate racemase;
PDBTitle: glutamate racemase (muri) from mycobacterium smegmatis with bound d-2 glutamate, 1.8 angstrom resolution, x-ray diffraction
104c1af7A_
not modelled 20.8 24
PDB header:methyltransferase
Chain: A: PDB Molecule:chemotaxis receptor methyltransferase cher;
PDBTitle: cher from salmonella typhimurium

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