Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0396_(-)_475353_475745
DateTue Jul 23 14:50:46 BST 2019
Unique Job ID9658b1d5b295d7da
SequenceVRALGWLRED ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.339 Y:35.404 Z:32.930
Model (left) based on template c6ehiI_
Top template information
PDB header:dna binding protein
Chain: I: PDB Molecule:nuclease nuct;
PDBTitle: nuct from helicobacter pylori
Confidence and coverage
Confidence: 96.3% Coverage: 38%
49 residues ( 38% of your sequence) have been modelled with 96.3% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ehiI_



96.3 24
PDB header:dna binding protein
Chain: I: PDB Molecule:nuclease nuct;
PDBTitle: nuct from helicobacter pylori
2c4ggkA_



96.3 22
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial cardiolipin hydrolase;
PDBTitle: crystal structure of zucchini from mouse (mzuc / pld6 / mitopld) bound2 to tungstate
3d1xdpa3



94.3 15
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
4d1byra_



93.4 26
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Nuclease
5c4urjA_



93.0 26
PDB header:unknown function
Chain: A: PDB Molecule:protein fam83a;
PDBTitle: crystal structure of human bj-tsa-9
6c4gelA_



91.7 24
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial cardiolipin hydrolase;
PDBTitle: crystal structure of zucchini
7c3hsiC_



87.8 19
PDB header:transferase
Chain: C: PDB Molecule:phosphatidylserine synthase;
PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20
8c1v0sA_



83.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:phospholipase d;
PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf
9c5lzkB_



82.6 23
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
10c4genA_



77.3 26
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial cardiolipin hydrolase;
PDBTitle: crystal structure of zucchini (monomer)
11d1v0wa2



77.0 16
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Phospholipase D
12c2opwA_



73.5 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:phyhd1 protein;
PDBTitle: crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo)
13c5daqA_



64.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:phytanoyl-coa dioxygenase family protein (afu_orthologue
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase asqj in complex with2 4-methoxycyclopeptin
14c5zm4B_



58.7 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:dioxygenase anda;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase anda with2 preandiloid c
15c4naoA_



57.7 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of eash
16d1xdpa4



52.4 28
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
17c4mhuB_



50.9 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:ectoine hydroxylase;
PDBTitle: crystal structure of ectd from s. alaskensis with bound fe
18c3emrA_



46.2 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:ectd;
PDBTitle: crystal structure analysis of the ectoine hydroxylase ectd from2 salibacillus salexigens
19c5epaE_



44.0 20
PDB header:lyase
Chain: E: PDB Molecule:snok;
PDBTitle: crystal structure of non-heme alpha ketoglutarate dependent2 carbocyclase snok from nogalamycin biosynthesis
20c3nnlB_



43.0 12
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cura;
PDBTitle: halogenase domain from cura module (crystal form iii)
21d2a1xa1



not modelled 41.6 18
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:PhyH-like
22c4rctB_



not modelled 39.7 14
PDB header:hydrolase
Chain: B: PDB Molecule:restriction endonuclease r.ngovii;
PDBTitle: crystal structure of r-protein of ngoavii restriction endonuclease
23c5m0tA_



not modelled 34.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-ketoglutarate-dependent non-heme iron oxygenase eash;
PDBTitle: alpha-ketoglutarate-dependent non-heme iron oxygenase eash
24c5yboA_



not modelled 32.8 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:prha;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha in complex with2 preaustinoid a1
25c4xaaA_



not modelled 32.2 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of avio1 from streptomyces viridochromogenes tue57
26c5erlD_



not modelled 29.3 13
PDB header:isomerase
Chain: D: PDB Molecule:snon,snon;
PDBTitle: crystal structure of the epimerase snon in complex with ni2+,2 succinate and nogalamycin ro
27c4xabA_



not modelled 28.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:evdo2;
PDBTitle: crystal structure of evdo2 from micromonospora carbonacea var.2 aurantiaca
28c4xc9B_



not modelled 25.6 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidase/hydroxylase;
PDBTitle: crystal structure of apo hygx from streptomyces hygroscopicus
29d2o8ra4



not modelled 23.8 31
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
30c3dt5A_



not modelled 20.8 100
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein af_0924;
PDBTitle: c_terminal domain of protein of unknown function af_0924 from2 archaeoglobus fulgidus.
31c4zonB_



not modelled 18.6 23
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:verruculogen synthase;
PDBTitle: structure of ftmox1 with fumitremorgen b complex
32c5ncjB_



not modelled 17.2 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:leucine hydroxylase;
PDBTitle: grie in complex with manganese, succinate and (2s,4r)-5-hydroxyleucine
33c6ec3C_



not modelled 15.9 17
PDB header:transferase, oxidoreductase
Chain: C: PDB Molecule:methyltransferase domain-containing protein;
PDBTitle: crystal structure of evdmo1
34c2rdsA_



not modelled 13.6 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxypentalenic acid 11-beta hydroxylase; fe(ii)/alpha-
PDBTitle: crystal structure of ptlh with fe/oxalylglycine and ent-1-2 deoxypentalenic acid bound
35d1jy1a2



not modelled 9.6 40
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Tyrosyl-DNA phosphodiesterase TDP1
36d1qzqa1



not modelled 9.6 19
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Tyrosyl-DNA phosphodiesterase TDP1
37d2f3ci1



not modelled 9.5 50
Fold:Kazal-type serine protease inhibitors
Superfamily:Kazal-type serine protease inhibitors
Family:Ovomucoid domain III-like
38d1zata2



not modelled 7.5 10
Fold:L,D-transpeptidase pre-catalytic domain-like
Superfamily:L,D-transpeptidase pre-catalytic domain-like
Family:L,D-transpeptidase pre-catalytic domain-like
39c5m86C_



not modelled 7.2 33
PDB header:unknown function
Chain: C: PDB Molecule:ta1207;
PDBTitle: crystal structure of the thermoplasma acidophilum protein ta1207
40c5jnbE_



not modelled 7.1 45
PDB header:transferase
Chain: E: PDB Molecule:rnp (rrm rna binding domain) containing;
PDBTitle: structure of gld-2/rnp-8 complex
41c4ploA_



not modelled 6.3 19
PDB header:protein binding
Chain: A: PDB Molecule:netrin-1;
PDBTitle: crystal structure of chicken netrin-1 (ln-le3) in complex with mouse2 dcc (fn4-5)
42c4xbzB_



not modelled 6.1 6
PDB header:oxidoreductase
Chain: B: PDB Molecule:evdo1;
PDBTitle: crystal structure of evdo1 from micromonospora carbonacea var.2 aurantiaca
43c6epkB_



not modelled 5.6 36
PDB header:viral protein
Chain: B: PDB Molecule:precursor membrane protein;
PDBTitle: crystal structure of the precursor membrane protein-envelope protein2 heterodimer from the yellow fever virus
44c1q8hA_



not modelled 5.6 56
PDB header:metal binding protein
Chain: A: PDB Molecule:osteocalcin;
PDBTitle: crystal structure of porcine osteocalcin
45d1q8ha_



not modelled 5.6 56
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
46d2p8ta2



not modelled 5.6 55
Fold:DCoH-like
Superfamily:GAD domain-like
Family:PH0730 C-terminal domain-like
47c4b03D_



not modelled 5.6 22
PDB header:virus
Chain: D: PDB Molecule:dengue virus 1 prm protein;
PDBTitle: 6a electron cryomicroscopy structure of immature dengue virus serotype2 1

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