Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0397_(-)_475819_476187
DateTue Jul 23 14:50:47 BST 2019
Unique Job ID8b6bba937338538c
SequenceLLATFWGWRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.892 Y:17.607 Z:18.923
Model (left) based on template d2ysca1
Top template information
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
Confidence and coverage
Confidence: 78.2% Coverage: 17%
21 residues ( 17% of your sequence) have been modelled with 78.2% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2ysca1
78.2 38
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
2c4by2C_
72.2 19
PDB header:structural protein
Chain: C: PDB Molecule:anastral spindle 2, sas 4;
PDBTitle: sas-4 (dcpap) tcp domain in complex with a proline rich motif of ana22 (dstil) of drosophila melanogaster
3d2ho2a1
71.9 37
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
4c4bxrB_
71.6 20
PDB header:cell cycle
Chain: B: PDB Molecule:cpap;
PDBTitle: structure of the wild-type tcp10 domain of danio rerio cpap in complex2 with a peptide of danio rerio stil
5c4ld3A_
71.0 16
PDB header:structural protein, protein binding
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structural analysis of the microcephaly protein cpap g-box domain2 suggests a role in centriole elongation.
6d2bcoa1
51.2 16
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
7d1o5ua_
40.2 31
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Hypothetical protein TM1112
8c3bcwB_
40.1 19
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution
9d2g9da1
39.0 19
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
10c3es4B_
38.4 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold;
PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution
11d1yw6a1
36.3 22
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
12d2e45a1
35.9 38
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
13d2gpra_
35.6 13
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
14c3myxA_
31.3 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein pspto_0244;
PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution
15d1glaf_
31.0 20
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
16d2pyta1
30.9 16
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:EutQ-like
17d2f3ga_
30.1 20
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
18d1gpra_
29.6 13
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
19d2sn3a_
29.2 42
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
20c2k8iA_
29.0 21
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: solution structure of e.coli slyd
21d2b3ca_
not modelled 28.2 47
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
22d1iuqa_
not modelled 24.3 22
Fold:Glycerol-3-phosphate (1)-acyltransferase
Superfamily:Glycerol-3-phosphate (1)-acyltransferase
Family:Glycerol-3-phosphate (1)-acyltransferase
23c2vldA_
not modelled 22.2 23
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease nucs;
PDBTitle: crystal structure of a repair endonuclease from pyrococcus abyssi
24c2kfwA_
not modelled 21.5 21
PDB header:isomerase
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase
PDBTitle: solution structure of full-length slyd from e.coli
25c2jrtA_
not modelled 21.5 47
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr solution structure of the protein coded by gene2 rhos4_12090 of rhodobacter sphaeroides. northeast3 structural genomics target rhr5
26c3lwcA_
not modelled 21.4 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution
27c5gkeB_
not modelled 21.2 23
PDB header:hydrolase/dna
Chain: B: PDB Molecule:endonuclease endoms;
PDBTitle: structure of endoms-dsdna1 complex
28d2oa4a1
not modelled 20.7 37
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:SPO1678-like
29c5j67C_
not modelled 20.7 31
PDB header:membrane protein
Chain: C: PDB Molecule:astrotactin-2;
PDBTitle: structure of astrotactin-2, a conserved vertebrate-specific and2 perforin-like membrane protein involved in neuronal development
30c2mx4A_
not modelled 18.8 42
PDB header:translation,protein binding
Chain: A: PDB Molecule:eukaryotic translation initiation factor 4e-binding protein
PDBTitle: nmr structure of phosphorylated 4e-bp2
31c5ljyA_
not modelled 16.3 37
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: structure of hantavirus envelope glycoprotein gc in complex with scfv2 a5
32d1jnua_
not modelled 15.7 29
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:Flavin-binding PAS domain
33d1mswd_
not modelled 15.5 33
Fold:DNA/RNA polymerases
Superfamily:DNA/RNA polymerases
Family:T7 RNA polymerase
34c3ue6C_
not modelled 11.9 20
PDB header:signaling protein
Chain: C: PDB Molecule:aureochrome1;
PDBTitle: the dark structure of the blue-light photoreceptor aureochrome1 lov
35c2qsdB_
not modelled 11.9 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: crystal structure of a protein il1583 from idiomarina loihiensis
36d1bywa_
not modelled 11.7 14
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:Flavin-binding PAS domain
37c3t50B_
not modelled 11.4 27
PDB header:transferase
Chain: B: PDB Molecule:blue-light-activated histidine kinase;
PDBTitle: x-ray structure of the lov domain from the lov-hk sensory protein from2 brucella abortus (dark state).
38c2ljmA_
not modelled 11.3 33
PDB header:toxin
Chain: A: PDB Molecule:beta-mammal toxin css2;
PDBTitle: solution structure of cssii
39d2r4qa1
not modelled 10.9 33
Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
40c4axoA_
not modelled 10.5 20
PDB header:structural protein
Chain: A: PDB Molecule:ethanolamine utilization protein;
PDBTitle: structure of the clostridium difficile eutq protein
41c4mxeA_
not modelled 10.1 36
PDB header:transferase
Chain: A: PDB Molecule:n-acetyltransferase esco1;
PDBTitle: human esco1 (eco1/ctf7 ortholog), acetyltransferase domain in complex2 with acetyl-coa
42c4m0hB_
not modelled 9.9 44
PDB header:signaling protein
Chain: B: PDB Molecule:conserved hypothetical protein, putative anti-sigma factor;
PDBTitle: crystal structure of a putative anti-sigma factor (bdi_1681) from2 parabacteroides distasonis atcc 8503 at 2.50 a resolution
43c3ol0C_
not modelled 8.7 32
PDB header:de novo protein
Chain: C: PDB Molecule:de novo designed monomer trefoil-fold sub-domain which
PDBTitle: crystal structure of monofoil-4p homo-trimer: de novo designed monomer2 trefoil-fold sub-domain which forms homo-trimer assembly
44c3i38E_
not modelled 8.5 20
PDB header:chaperone
Chain: E: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
45c3i38C_
not modelled 8.5 20
PDB header:chaperone
Chain: C: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
46c2mz8A_
not modelled 8.4 100
PDB header:transcription regulator
Chain: A: PDB Molecule:sigma factor-binding protein crl;
PDBTitle: solution nmr structure of salmonella typhimurium transcriptional2 regulator protein crl
47d1n9la_
not modelled 8.3 20
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:Flavin-binding PAS domain
48c2je2A_
not modelled 8.3 57
PDB header:metal binding protein
Chain: A: PDB Molecule:cytochrome p460;
PDBTitle: cytochrome p460 from nitrosomonas europaea - probable2 nonphysiological oxidized form
49c6amgA_
not modelled 8.3 71
PDB header:metal binding protein
Chain: A: PDB Molecule:cytochrome p460;
PDBTitle: cyt p460 of nitrosomonas sp. al212
50c4afhE_
not modelled 8.0 45
PDB header:acetylcholine-binding protein
Chain: E: PDB Molecule:achbp;
PDBTitle: capitella teleta achbp in complex with lobeline
51d1jzaa_
not modelled 7.9 42
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
52c6hihB_
not modelled 7.8 57
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c;
PDBTitle: cytochrome c prime beta from methylococcus capsulatus (bath)
53c3jqoC_
not modelled 7.7 29
PDB header:transport protein
Chain: C: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
54c3jqoF_
not modelled 7.7 29
PDB header:transport protein
Chain: F: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
55c3jqoj_
not modelled 7.7 29
PDB header:transport protein
Chain: J: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
56c3jqog_
not modelled 7.7 29
PDB header:transport protein
Chain: G: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
57c3jqoI_
not modelled 7.7 29
PDB header:transport protein
Chain: I: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
58c3jqom_
not modelled 7.7 29
PDB header:transport protein
Chain: M: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
59c3jqoX_
not modelled 7.6 29
PDB header:transport protein
Chain: X: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
60c3jqoO_
not modelled 7.6 29
PDB header:transport protein
Chain: O: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
61c3jqoa_
not modelled 7.6 29
PDB header:transport protein
Chain: A: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
62c3jqod_
not modelled 7.6 29
PDB header:transport protein
Chain: D: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
63c5u75A_
not modelled 7.6 14
PDB header:toxin
Chain: A: PDB Molecule:enterotoxin-like toxin x;
PDBTitle: the structure of staphylococcal enterotoxin-like x (selx), a unique2 superantigen
64c3spaA_
not modelled 7.5 38
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial;
PDBTitle: crystal structure of human mitochondrial rna polymerase
65c3jqoR_
not modelled 7.5 29
PDB header:transport protein
Chain: R: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
66c3jqop_
not modelled 7.5 29
PDB header:transport protein
Chain: P: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
67c3jqoU_
not modelled 7.4 29
PDB header:transport protein
Chain: U: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
68c3zbia_
not modelled 7.4 29
PDB header:cell adhesion
Chain: A: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
69c3zbiU_
not modelled 7.4 29
PDB header:cell adhesion
Chain: U: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
70c3zbip_
not modelled 7.4 29
PDB header:cell adhesion
Chain: P: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
71c3zbid_
not modelled 7.4 29
PDB header:cell adhesion
Chain: D: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
72c3zbiO_
not modelled 7.4 29
PDB header:cell adhesion
Chain: O: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
73c3zbig_
not modelled 7.4 29
PDB header:cell adhesion
Chain: G: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
74c3zbiC_
not modelled 7.4 29
PDB header:cell adhesion
Chain: C: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
75c3jqoL_
not modelled 7.4 29
PDB header:transport protein
Chain: L: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
76c3zbiX_
not modelled 7.4 29
PDB header:cell adhesion
Chain: X: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
77c3zbim_
not modelled 7.4 29
PDB header:cell adhesion
Chain: M: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
78c3zbiF_
not modelled 7.4 29
PDB header:cell adhesion
Chain: F: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
79c3zbiR_
not modelled 7.4 29
PDB header:cell adhesion
Chain: R: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
80c3zbiI_
not modelled 7.4 29
PDB header:cell adhesion
Chain: I: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
81c3zbiL_
not modelled 7.4 29
PDB header:cell adhesion
Chain: L: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
82c3zbij_
not modelled 7.4 29
PDB header:cell adhesion
Chain: J: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
83c3cnrA_
not modelled 7.3 60
PDB header:unknown function
Chain: A: PDB Molecule:type iv fimbriae assembly protein;
PDBTitle: crystal structure of pilz (xac1133) from xanthomonas axonopodis pv2 citri
84c3p45F_
not modelled 6.9 27
PDB header:hydrolase
Chain: F: PDB Molecule:caspase-6;
PDBTitle: crystal structure of apo-caspase-6 at physiological ph
85c3rpjA_
not modelled 6.9 100
PDB header:transcription regulator
Chain: A: PDB Molecule:curlin genes transcriptional regulator;
PDBTitle: structure of a curlin genes transcriptional regulator protein from2 proteus mirabilis hi4320.
86c4c24A_
not modelled 6.8 9
PDB header:lyase
Chain: A: PDB Molecule:l-fuculose phosphate aldolase;
PDBTitle: l-fuculose 1-phosphate aldolase
87c4hoiB_
not modelled 6.5 14
PDB header:transport protein
Chain: B: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: crystal structure of pas domain from the mouse eag1 potassium channel
88c6hiuA_
not modelled 6.4 43
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome p460;
PDBTitle: cytochrome p460 from methylococcus capsulatus (bath)
89c2bj0D_
not modelled 6.3 36
PDB header:glycoprotein
Chain: D: PDB Molecule:acetylcholine-binding protein;
PDBTitle: crystal structure of achbp from bulinus truncatus revals2 the conserved structural scaffold and sites of variation3 in nicotinic acetylcholine receptors
90c2vn4A_
not modelled 6.1 35
PDB header:hydrolase
Chain: A: PDB Molecule:glucoamylase;
PDBTitle: glycoside hydrolase family 15 glucoamylase from hypocrea jecorina
91c2i45C_
not modelled 6.0 12
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis
92c2ofqB_
not modelled 5.9 33
PDB header:protein transport/protein transport
Chain: B: PDB Molecule:tran;
PDBTitle: nmr solution structure of a complex between the virb9/virb72 interaction domains of the pkm101 type iv secretion system
93c2ixsB_
not modelled 5.9 31
PDB header:hydrolase
Chain: B: PDB Molecule:sdai restriction endonuclease;
PDBTitle: structure of sdai restriction endonuclease
94c6erqA_
not modelled 5.9 38
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial;
PDBTitle: structure of the human mitochondrial transcription initiation complex2 at the hsp promoter
95c2byqC_
not modelled 5.9 17
PDB header:receptor
Chain: C: PDB Molecule:soluble acetylcholine receptor;
PDBTitle: crystal structure of aplysia californica achbp in complex with2 epibatidine
96c5cd6C_
not modelled 5.8 13
PDB header:unknown function
Chain: C: PDB Molecule:tpr-domain containing protein;
PDBTitle: crystal structure of a tpr-domain containing protein (bdi_1685) from2 parabacteroides distasonis atcc 8503 at 2.26 a resolution
97d2d40a1
not modelled 5.8 18
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Gentisate 1,2-dioxygenase-like
98c4dt4A_
not modelled 5.7 28
PDB header:isomerase
Chain: A: PDB Molecule:fkbp-type 16 kda peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of the ppiase-chaperone slpa with the chaperone2 binding site occupied by the linker of the purification tag
99d2afaa1
not modelled 5.7 23
Fold:alpha/alpha toroid
Superfamily:Six-hairpin glycosidases
Family:N-acylglucosamine (NAG) epimerase

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