Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0436c_(pssA)_524533_525393
DateTue Jul 23 14:50:51 BST 2019
Unique Job ID758f89878081033d
SequenceMIGKPRGRRG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.435 Y:57.009 Z:36.071
Model (left) based on template c6h59B_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:cdp-diacylglycerol--inositol 3-phosphatidyltransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis phosphatidylinositol2 phosphate synthase (pgsa1) with cdp-dag bound
Confidence and coverage
Confidence: 99.9% Coverage: 66%
188 residues ( 66% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6h59B_



99.9 15
PDB header:transferase
Chain: B: PDB Molecule:cdp-diacylglycerol--inositol 3-phosphatidyltransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis phosphatidylinositol2 phosphate synthase (pgsa1) with cdp-dag bound
2c5d92B_



99.9 17
PDB header:membrane protein
Chain: B: PDB Molecule:af2299 protein,phosphatidylinositol synthase;
PDBTitle: structure of a phosphatidylinositolphosphate (pip) synthase from2 renibacterium salmoninarum
3c4o6mA_



99.9 17
PDB header:transferase
Chain: A: PDB Molecule:af2299, a cdp-alcohol phosphotransferase;
PDBTitle: structure of af2299, a cdp-alcohol phosphotransferase (cmp-bound)
4c4mndA_



99.9 15
PDB header:transferase
Chain: A: PDB Molecule:ctp l-myo-inositol-1-phosphate cytidylyltransferase/cdp-l-
PDBTitle: crystal structure of archaeoglobus fulgidus ipct-dipps bifunctional2 membrane protein
5d2cx6a1



32.7 17
Fold:Barstar-like
Superfamily:Barstar-related
Family:Barstar-related
6d1ay7b_



28.4 21
Fold:Barstar-like
Superfamily:Barstar-related
Family:Barstar-related
7c4i0xJ_



21.2 17
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
8c2le7A_



11.0 64
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: solution nmr structure of the s4s5 linker of herg potassium channel
9c2kt5B_



10.8 40
PDB header:rna binding protein / viral protein
Chain: B: PDB Molecule:icp27;
PDBTitle: rrm domain of mrna export adaptor ref2-i bound to hsv-1 icp27 peptide
10c6mjbC_



10.0 26
PDB header:cell cycle
Chain: C: PDB Molecule:kinetochore-associated protein dsn1;
PDBTitle: structure of candida glabrata csm1:dsn1(14-72) complex
11c1w8xP_



9.5 15
PDB header:virus
Chain: P: PDB Molecule:protein p16;
PDBTitle: structural analysis of prd1
12c3lrcC_



8.2 15
PDB header:transport protein
Chain: C: PDB Molecule:arginine/agmatine antiporter;
PDBTitle: structure of e. coli adic (p1)
13c1gl2D_



6.4 29
PDB header:membrane protein
Chain: D: PDB Molecule:syntaxin 8;
PDBTitle: crystal structure of an endosomal snare core complex
14c3b5nL_



6.0 29
PDB header:membrane protein
Chain: L: PDB Molecule:protein transport protein sec9;
PDBTitle: structure of the yeast plasma membrane snare complex
15c2ov2O_



5.7 17
PDB header:protein binding/transferase
Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4;
PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4)
16c6h2eP_



5.6 23
PDB header:toxin
Chain: P: PDB Molecule:ahlc;
PDBTitle: structure of the soluble ahlc of the tripartite alpha-pore forming2 toxin, ahl, from aeromonas hydrophila.
17d1y0ka1



5.1 13
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:PA4535-like
18c2amwA_



5.1 29
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ne2163;
PDBTitle: solution nmr structure of protein ne2163 from nitrosomonas europaea.2 northeast structural genomics consortium target net1.

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below