Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0454_(-)_544838_545188
DateTue Jul 23 14:50:53 BST 2019
Unique Job ID7a57584f8a9c4047
SequenceLKQDFGLDVP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.775 Y:51.160 Z:16.163
Model (left) based on template d1bwvs_
Top template information
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
Confidence and coverage
Confidence: 25.8% Coverage: 24%
28 residues ( 24% of your sequence) have been modelled with 25.8% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1bwvs_



25.8 25
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
2c3j20S_



17.6 21
PDB header:ribosome
Chain: S: PDB Molecule:30s ribosomal protein s17e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
3d1bxni_



17.2 34
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
4c5xxuR_



16.5 43
PDB header:ribosome
Chain: R: PDB Molecule:ribosomal protein es17;
PDBTitle: small subunit of toxoplasma gondii ribosome
5c5xyiR_



15.5 36
PDB header:ribosome
Chain: R: PDB Molecule:40s ribosomal protein s17-b, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
6c5nv3P_



15.4 26
PDB header:lyase
Chain: P: PDB Molecule:ribulose bisphosphate carboxylase small chain 1;
PDBTitle: structure of rubisco from rhodobacter sphaeroides in complex with cabp
7d1rq6a_



14.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Rps17e-like
Family:Rps17e-like
8c2xzmV_



14.8 36
PDB header:ribosome
Chain: V: PDB Molecule:rps17e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
9c3zeyL_



14.2 29
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s17, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
10c3j3aR_



13.5 29
PDB header:ribosome
Chain: R: PDB Molecule:40s ribosomal protein s17;
PDBTitle: structure of the human 40s ribosomal proteins
11c5mz2I_



11.1 25
PDB header:photosynthesis
Chain: I: PDB Molecule:rubisco small subunit;
PDBTitle: rubisco from thalassiosira antarctica
12c3iz6Q_



9.9 43
PDB header:ribosome
Chain: Q: PDB Molecule:40s ribosomal protein s17 (s17e);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
13c3izbQ_



8.9 36
PDB header:ribosome
Chain: Q: PDB Molecule:40s ribosomal protein rps17 (s17e);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
14c6mgdA_



7.8 29
PDB header:transferase
Chain: A: PDB Molecule:capsular polysaccharide export system protein kpsc;
PDBTitle: thermosulfurimonas dismutans kpsc, beta kdo 2,4 transferase

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