Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0460_(-)_551752_551991
DateTue Jul 23 14:50:54 BST 2019
Unique Job IDd514ba3bf023f668
SequenceMLVGNAIGLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:24.420 Y:32.940 Z:20.986
Model (left) based on template d1o82a_
Top template information
Fold:Saposin-like
Superfamily:Bacteriocin AS-48
Family:Bacteriocin AS-48
Confidence and coverage
Confidence: 51.4% Coverage: 54%
43 residues ( 54% of your sequence) have been modelled with 51.4% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1o82a_



51.4 28
Fold:Saposin-like
Superfamily:Bacteriocin AS-48
Family:Bacteriocin AS-48
2c1cn3F_



20.1 31
PDB header:viral protein
Chain: F: PDB Molecule:fragment of coat protein vp2;
PDBTitle: interaction of polyomavirus internal protein vp2 with major2 capsid protein vp1 and implications for participation of3 vp2 in viral entry
3c6f34C_



19.3 75
PDB header:membrane protein
Chain: C: PDB Molecule:mgts;
PDBTitle: crystal structure of a bacterial cationic amino acid transporter (cat)2 homologue bound to arginine.
4c5oqtC_



19.3 75
PDB header:transport protein
Chain: C: PDB Molecule:uncharacterized protein ynem;
PDBTitle: crystal structure of a bacterial cationic amino acid transporter (cat)2 homologue
5c2x3mA_



12.7 50
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein orf239;
PDBTitle: crystal structure of hypothetical protein orf239 from pyrobaculum2 spherical virus
6c5faiA_



11.1 44
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase nep1;
PDBTitle: emg1 n1-specific pseudouridine methyltransferase
7d3bbda1



6.6 56
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:EMG1/NEP1-like
8c6cp9B_



6.1 88
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:cdii;
PDBTitle: contact-dependent growth inhibition toxin - immunity protein complex2 from klebsiella pneumoniae 342
9d1jqna_



5.9 45
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate carboxylase
10d2v3ka1



5.7 44
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:EMG1/NEP1-like
11c2lweA_



5.6 25
PDB header:signaling protein
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: solution structure of mutant (t170e) second card of human rig-i
12c1emxA_



5.6 80
PDB header:toxin
Chain: A: PDB Molecule:heteropodatoxin 2;
PDBTitle: solution structure of hptx2, a toxin from heteropoda2 venatoria spider venom that blocks kv4.2 potassium channel
13d1jqoa_



5.4 45
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate carboxylase

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below