Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0463_(-)_554019_554312
DateTue Jul 23 14:50:54 BST 2019
Unique Job ID8f0f8a89cfe6d986
SequenceMTRRASTDTP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.119 Y:17.899 Z:27.097
Model (left) based on template c3vrbG_
Top template information
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: G: PDB Molecule:cytochrome b-large subunit;
PDBTitle: mitochondrial rhodoquinol-fumarate reductase from the parasitic2 nematode ascaris suum with the specific inhibitor flutolanil and3 substrate fumarate
Confidence and coverage
Confidence: 46.0% Coverage: 45%
44 residues ( 45% of your sequence) have been modelled with 46.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3vrbG_



46.0 16
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: G: PDB Molecule:cytochrome b-large subunit;
PDBTitle: mitochondrial rhodoquinol-fumarate reductase from the parasitic2 nematode ascaris suum with the specific inhibitor flutolanil and3 substrate fumarate
2c4rfsS_



32.6 19
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:substrate binding pritein s;
PDBTitle: structure of a pantothenate energy coupling factor transporter
3c5ir6A_



21.6 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:bd-type quinol oxidase subunit i;
PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans
4c2l2tA_



20.7 58
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: solution nmr structure of the erbb4 dimeric membrane domain
5c2lcxB_



20.7 58
PDB header:transferase
Chain: B: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: spatial structure of the erbb4 dimeric tm domain
6c6adqP_



17.7 13
PDB header:electron transport
Chain: P: PDB Molecule:prokaryotic respiratory supercomplex associate factor 1
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
7c2k9yA_



16.0 45
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
8c2k9yB_



14.1 36
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
9c3zd0A_



13.3 46
PDB header:transport protein
Chain: A: PDB Molecule:p7 protein;
PDBTitle: the solution structure of monomeric hepatitis c virus p72 yields potent inhibitors of virion release
10c2m6xC_



9.8 23
PDB header:membrane protein
Chain: C: PDB Molecule:p7;
PDBTitle: structure of the p7 channel of hepatitis c virus, genotype 5a
11c1k82D_



9.7 13
PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
12d1q59a_



8.5 13
Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
13c2opfA_



8.0 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
14c5tzpA_



7.3 13
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-like protein fpv039;
PDBTitle: crystal structure of fpv039:bik bh3 complex
15c6m97A_



7.1 19
PDB header:transport protein
Chain: A: PDB Molecule:chimera protein of high affinity copper uptake protein 1
PDBTitle: crystal structure of the high-affinity copper transporter ctr1
16d1ic8a2



6.5 12
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
17c2a5yA_



6.5 21
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator ced-9;
PDBTitle: structure of a ced-4/ced-9 complex
18c3twkB_



6.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
19c5vf3Z_



6.0 20
PDB header:virus
Chain: Z: PDB Molecule:highly immunogenic outer capsid protein;
PDBTitle: bacteriophage t4 isometric capsid
20c4cdiC_



5.8 35
PDB header:membrane protein
Chain: C: PDB Molecule:predicted protein;
PDBTitle: crystal structure of acrb-acrz complex
21d1ee8a1



not modelled 5.8 19
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
22d1k3xa1



not modelled 5.6 14
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
23c3rq9B_



not modelled 5.6 38
PDB header:tse2-binding protein
Chain: B: PDB Molecule:type vi secretion immunity protein;
PDBTitle: structure of tsi2, a tse2-immunity protein from pseudomonas aeruginosa
24c5wosA_



not modelled 5.6 27
PDB header:viral protein
Chain: A: PDB Molecule:cnpv058 bcl-2 like protein;
PDBTitle: structural and functional insights into canarypox virus cnp0582 regulation of apoptosis
25d1k3ka_



not modelled 5.4 27
Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
26c4hzuS_



not modelled 5.4 12
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:predicted membrane protein;
PDBTitle: structure of a bacterial energy-coupling factor transporter
27c2n2aA_



not modelled 5.1 30
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below