Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0476_(-)_566511_566774
DateTue Jul 23 14:50:55 BST 2019
Unique Job IDf563e1ee639451a9
SequenceMLVLLVAVLV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.021 Y:12.791 Z:13.214
Model (left) based on template c2n1pA_
Top template information
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 5b, ns5b;
PDBTitle: structure of the c-terminal membrane domain of hcv ns5b protein
Confidence and coverage
Confidence: 18.1% Coverage: 25%
22 residues ( 25% of your sequence) have been modelled with 18.1% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2n1pA_



18.1 23
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 5b, ns5b;
PDBTitle: structure of the c-terminal membrane domain of hcv ns5b protein
2c6d79A_



17.4 14
PDB header:transport protein
Chain: A: PDB Molecule:sulfate transporter cysz;
PDBTitle: structure of cysz, a sulfate permease from pseudomonas fragi
3d2c4fl3



17.3 44
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
4d1danl3



15.9 44
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
5c3ixsF_



13.4 27
PDB header:protein binding
Chain: F: PDB Molecule:ring1 and yy1-binding protein;
PDBTitle: ring1b c-terminal domain/rybp c-terminal domain complex
6c2zfdB_



8.0 25
PDB header:signaling protein/transferase
Chain: B: PDB Molecule:putative uncharacterized protein t20l15_90;
PDBTitle: the crystal structure of plant specific calcium binding protein atcbl22 in complex with the regulatory domain of atcipk14
7c5u89B_



7.4 40
PDB header:hydrolase/inhibitor
Chain: B: PDB Molecule:mbth domain protein;
PDBTitle: crystal structure of a cross-module fragment from the dimodular nrps2 dhbf
8c3a0hx_



7.0 28
PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of i-substituted photosystem ii complex
9c3a0bx_



7.0 28
PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of br-substituted photosystem ii complex
10c3a0hX_



7.0 28
PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of i-substituted photosystem ii complex
11c3a0bX_



7.0 28
PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of br-substituted photosystem ii complex
12d1pjca2



6.7 8
Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:L-alanine dehydrogenase-like
13c2kncA_



5.9 23
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
14c1s5lx_



5.9 28
PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem ii psbx protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below