Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0480c_(-)_568967_569809
DateTue Jul 23 14:50:56 BST 2019
Unique Job IDa62a31a44e006b1d
SequenceMRIALAQIRS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.113 Y:53.129 Z:42.827
Model (left) based on template c2vhiG_
Top template information
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
Confidence and coverage
Confidence:100.0% Coverage: 99%
276 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2vhiG_



100.0 18
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
2c1emsB_



100.0 28
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
3c2vhhA_



100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
4c2w1vA_



100.0 33
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase homolog 2;
PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
5c6ftqA_



100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:beta-ureidopropionase;
PDBTitle: crystal structure of human beta-ureidopropionase (beta-alanine2 synthase) - mutant t299c
6c5h8lM_



100.0 21
PDB header:hydrolase
Chain: M: PDB Molecule:n-carbamoylputrescine amidohydrolase;
PDBTitle: crystal structure of medicago truncatula n-carbamoylputrescine2 amidohydrolase (mtcpa) c158s mutant in complex with putrescine
7d1uf5a_



100.0 24
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
8c2plqA_



100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:aliphatic amidase;
PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
9c2e2kC_



100.0 17
PDB header:hydrolase
Chain: C: PDB Molecule:formamidase;
PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad
10c4hg3C_



100.0 28
PDB header:hydrolase
Chain: C: PDB Molecule:probable hydrolase nit2;
PDBTitle: structural insights into yeast nit2: wild-type yeast nit2 in complex2 with alpha-ketoglutarate
11c2e11B_



100.0 29
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site
12c6mg6D_



100.0 19
PDB header:hydrolase
Chain: D: PDB Molecule:carbon-nitrogen hydrolase;
PDBTitle: crystal structure of carbon-nitrogen hydrolase from helicobacter2 pylori g27
13d1emsa2



100.0 28
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
14c5khaA_



100.0 21
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad+ synthetase;
PDBTitle: structure of glutamine-dependent nad+ synthetase from acinetobacter2 baumannii in complex with adenosine diphosphate (adp)
15c3dlaD_



100.0 21
PDB header:ligase
Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
16d1f89a_



100.0 25
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
17c3wuyA_



100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase;
PDBTitle: crystal structure of nit6803
18c4f4hA_



100.0 23
PDB header:ligase
Chain: A: PDB Molecule:glutamine dependent nad+ synthetase;
PDBTitle: crystal structure of a glutamine dependent nad+ synthetase from2 burkholderia thailandensis
19d1j31a_



100.0 26
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
20c3n05B_



100.0 25
PDB header:ligase
Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis
21c3hkxA_



not modelled 100.0 30
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
22c3ilvA_



not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
23c4cyyA_



not modelled 100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between metabolic disease,2 oxidative stress and inflammation
24c5vrhA_



not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: apolipoprotein n-acyltransferase c387s active site mutant
25c5n6mA_



not modelled 100.0 20
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
26c5hyyA_



not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:nta1p;
PDBTitle: crystal structure of n-terminal amidase
27c2csuB_



not modelled 78.2 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:457aa long hypothetical protein;
PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3
28d1s3la_



not modelled 74.1 18
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:YfcE-like
29c1s3mA_



not modelled 73.3 18
PDB header:phosphodiesterase
Chain: A: PDB Molecule:hypothetical protein mj0936;
PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase
30c3qfnA_



not modelled 70.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate
31d1uf3a_



not modelled 68.8 22
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:TT1561-like
32d1i60a_



not modelled 60.9 11
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:IolI-like
33c1su1A_



not modelled 59.9 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein yfce;
PDBTitle: structural and biochemical characterization of yfce, a phosphoesterase2 from e. coli
34d1su1a_



not modelled 59.9 27
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:YfcE-like
35d1o60a_



not modelled 58.1 10
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I DAHP synthetase
36c6ncsB_



not modelled 56.0 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-acetylneuraminic acid (sialic acid) synthetase;
PDBTitle: crystal structure of n-acetylneuraminic acid (sialic acid) synthetase2 from leptospira borgpetersenii serovar hardjo-bovis in complex with3 citrate
37d1d9ea_



not modelled 54.7 9
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I DAHP synthetase
38d1t70a_



not modelled 46.8 16
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:DR1281-like
39d1gsaa1



not modelled 42.9 11
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Prokaryotic glutathione synthetase, N-terminal domain
40c5zfsA_



not modelled 42.4 17
PDB header:isomerase
Chain: A: PDB Molecule:d-allulose-3-epimerase;
PDBTitle: crystal structure of arthrobacter globiformis m30 sugar epimerase2 which can produce d-allulose from d-fructose
41c3stgA_



not modelled 40.6 14
PDB header:transferase
Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase;
PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis
42c4lu0A_



not modelled 39.6 12
PDB header:transferase
Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase;
PDBTitle: crystal structure of 2-keto-3-deoxy-d-manno-octulosonate-8-phosphate2 synthase from pseudomonas aeruginosa.
43c2fu3A_



not modelled 36.8 11
PDB header:biosynthetic protein/structural protein
Chain: A: PDB Molecule:gephyrin;
PDBTitle: crystal structure of gephyrin e-domain
44c4k3zA_



not modelled 36.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-erythrulose 4-phosphate dehydrogenase;
PDBTitle: crystal structure of d-erythrulose 4-phosphate dehydrogenase from2 brucella melitensis, solved by iodide sad
45c3dx5A_



not modelled 36.0 9
PDB header:lyase
Chain: A: PDB Molecule:uncharacterized protein asbf;
PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis
46c2ou4C_



not modelled 34.8 14
PDB header:isomerase
Chain: C: PDB Molecule:d-tagatose 3-epimerase;
PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii
47c3vniC_



not modelled 34.5 6
PDB header:isomerase
Chain: C: PDB Molecule:xylose isomerase domain protein tim barrel;
PDBTitle: crystal structures of d-psicose 3-epimerase from clostridium2 cellulolyticum h10 and its complex with ketohexose sugars
48c4r8kC_



not modelled 33.4 11
PDB header:hydrolase
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the guinea pig l-asparaginase 1 catalytic domain
49c2qw5B_



not modelled 33.0 10
PDB header:isomerase
Chain: B: PDB Molecule:xylose isomerase-like tim barrel;
PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution
50c4yajA_



not modelled 32.8 15
PDB header:ligase
Chain: A: PDB Molecule:alpha subunit of acetyl-coenzyme a synthetase
PDBTitle: ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a2 synthetase 1 (apo form)
51c3wqoB_



not modelled 30.1 10
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein mj1311;
PDBTitle: crystal structure of d-tagatose 3-epimerase-like protein
52c2ei9A_



not modelled 29.2 23
PDB header:gene regulation
Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein;
PDBTitle: crystal structure of r1bm endonuclease domain
53d4pgaa_



not modelled 29.1 13
Fold:Glutaminase/Asparaginase
Superfamily:Glutaminase/Asparaginase
Family:Glutaminase/Asparaginase
54d1t71a_



not modelled 28.6 15
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:DR1281-like
55c2ejcA_



not modelled 28.6 9
PDB header:ligase
Chain: A: PDB Molecule:pantoate--beta-alanine ligase;
PDBTitle: crystal structure of pantoate--beta-alanine ligase (panc)2 from thermotoga maritima
56d1agxa_



not modelled 28.5 13
Fold:Glutaminase/Asparaginase
Superfamily:Glutaminase/Asparaginase
Family:Glutaminase/Asparaginase
57d2zdra2



not modelled 28.1 16
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
58c2p2dA_



not modelled 27.8 11
PDB header:transferase
Chain: A: PDB Molecule:l-asparaginase i;
PDBTitle: crystal structure and allosteric regulation of the cytoplasmic2 escherichia coli l-asparaginase i
59d1v8fa_



not modelled 27.0 21
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
60d1ihoa_



not modelled 26.9 18
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
61d2yvta1



not modelled 26.7 18
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:TT1561-like
62c5hmqE_



not modelled 26.2 15
PDB header:lyase
Chain: E: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase;
PDBTitle: xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase2 fusion protein
63c3mxtA_



not modelled 25.3 15
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantoate-beta-alanine ligase from campylobacter2 jejuni
64c3uk2B_



not modelled 25.3 9
PDB header:ligase
Chain: B: PDB Molecule:pantothenate synthetase;
PDBTitle: the structure of pantothenate synthetase from burkholderia2 thailandensis
65c3vylB_



not modelled 25.2 14
PDB header:isomerase
Chain: B: PDB Molecule:l-ribulose 3-epimerase;
PDBTitle: structure of l-ribulose 3-epimerase
66c1gshA_



not modelled 25.1 11
PDB header:glutathione biosynthesis ligase
Chain: A: PDB Molecule:glutathione biosynthetic ligase;
PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5
67d2vgna3



not modelled 24.6 11
Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:ERF1/Dom34 C-terminal domain-like
68c2zdsB_



not modelled 24.5 14
PDB header:dna binding protein
Chain: B: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of sco6571 from streptomyces coelicolor a3(2)
69c3o3cD_



not modelled 24.3 13
PDB header:transferase
Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2;
PDBTitle: glycogen synthase basal state udp complex
70c2nqqA_



not modelled 24.3 10
PDB header:biosynthetic protein
Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea;
PDBTitle: moea r137q
71c3qxbB_



not modelled 23.9 11
PDB header:isomerase
Chain: B: PDB Molecule:putative xylose isomerase;
PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
72c3guzB_



not modelled 23.0 18
PDB header:ligase
Chain: B: PDB Molecule:pantothenate synthetase;
PDBTitle: structural and substrate-binding studies of pantothenate2 synthenate (ps)provide insights into homotropic inhibition3 by pantoate in ps's
73c3rqzC_



not modelled 22.7 29
PDB header:hydrolase
Chain: C: PDB Molecule:metallophosphoesterase;
PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus
74c5g2rA_



not modelled 22.2 14
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin biosynthesis protein cnx1;
PDBTitle: crystal structure of the mo-insertase domain cnx1e from2 arabidopsis thaliana
75c3n8hA_



not modelled 22.1 12
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantoate-beta-alanine ligase from francisella2 tularensis
76c3aytA_



not modelled 21.8 15
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein tthb071;
PDBTitle: tthb071 protein from thermus thermophilus hb8
77d2a40b1



not modelled 21.1 17
Fold:DNase I-like
Superfamily:DNase I-like
Family:DNase I-like
78d2ocda1



not modelled 21.1 8
Fold:Glutaminase/Asparaginase
Superfamily:Glutaminase/Asparaginase
Family:Glutaminase/Asparaginase
79c4f1hA_



not modelled 20.9 10
PDB header:hydrolase/dna
Chain: A: PDB Molecule:tyrosyl-dna phosphodiesterase 2;
PDBTitle: crystal structure of tdp2 from danio rerio complexed with a single2 strand dna
80d1yx1a1



not modelled 20.8 12
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:KguE-like
81c3sz8D_



not modelled 20.8 14
PDB header:transferase
Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2;
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
82c3tebA_



not modelled 20.4 10
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase;
PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b
83c6bngB_



not modelled 20.4 10
PDB header:transferase
Chain: B: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase;
PDBTitle: structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 acinetobacter baumannii
84c3pnxF_



not modelled 20.3 8
PDB header:transferase
Chain: F: PDB Molecule:putative sulfurtransferase dsre;
PDBTitle: crystal structure of a putative sulfurtransferase dsre (swol_2425)2 from syntrophomonas wolfei str. goettingen at 1.92 a resolution
85c2o14A_



not modelled 20.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein yxim;
PDBTitle: x-ray crystal structure of protein yxim_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr595
86c5d95A_



not modelled 19.5 19
PDB header:transferase
Chain: A: PDB Molecule:aminotransferase class-iii;
PDBTitle: structure of thermostable omega-transaminase
87c2nydB_



not modelled 19.4 12
PDB header:unknown function
Chain: B: PDB Molecule:upf0135 protein sa1388;
PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
88c1xuzA_



not modelled 18.4 18
PDB header:biosynthetic protein
Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac;
PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
89d1vlia2



not modelled 17.5 15
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
90c2odrC_



not modelled 16.9 20
PDB header:ligase
Chain: C: PDB Molecule:phosphoseryl-trna synthetase;
PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase
91c4s1aB_



not modelled 16.7 11
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein cthe_0052 from2 ruminiclostridium thermocellum atcc 27405
92c1vliA_



not modelled 16.4 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse;
PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
93c3ju2A_



not modelled 15.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein smc04130;
PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
94c2issF_



not modelled 15.7 10
PDB header:lyase, transferase
Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt;
PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima
95c2odrB_



not modelled 15.6 14
PDB header:ligase
Chain: B: PDB Molecule:phosphoseryl-trna synthetase;
PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase
96c5tnvA_



not modelled 15.5 16
PDB header:isomerase
Chain: A: PDB Molecule:ap endonuclease, family protein 2;
PDBTitle: crystal structure of a xylose isomerase-like tim barrel protein from2 mycobacterium smegmatis in complex with magnesium
97c2zsmA_



not modelled 15.3 21
PDB header:isomerase
Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase;
PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form
98d1x52a1



not modelled 15.2 7
Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:ERF1/Dom34 C-terminal domain-like
99c3cnyA_



not modelled 15.1 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:inositol catabolism protein iole;
PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution

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