Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0487_(-)_576790_577341
DateFri Jul 26 01:50:02 BST 2019
Unique Job IDbcd6f36597f121fc
SequenceVTSSLPTVQR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.632 Y:37.315 Z:35.970
Model (left) based on template d2plga1
Top template information
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Tll0839-like
Confidence and coverage
Confidence: 98.7% Coverage: 70%
129 residues ( 70% of your sequence) have been modelled with 98.7% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2plga1



98.7 16
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Tll0839-like
2d1jyoa_



97.1 11
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
3c4g6tA_



94.0 12
PDB header:chaperone
Chain: A: PDB Molecule:type iii chaperone protein shca;
PDBTitle: structure of the hopa1-scha chaperone-effector complex
4c3epuB_



93.8 13
PDB header:chaperone
Chain: B: PDB Molecule:stm2138 virulence chaperone;
PDBTitle: crystal structure of stm2138, a novel virulence chaperone in2 salmonella
5d1k3ea_



93.7 10
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
6d1ttwa_



91.9 13
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
7c6j7aB_



67.2 29
PDB header:oxidoreductase
Chain: B: PDB Molecule:heme oxygenase 1,nadph--cytochrome p450 reductase;
PDBTitle: fusion protein of heme oxygenase-1 and nadph cytochrome p450 reductase2 (17aa)
8d1xkpc1



56.8 21
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
9d1ul7a_



56.3 29
Fold:TBP-like
Superfamily:KA1-like
Family:Kinase associated domain 1, KA1
10c4akxA_



55.8 25
PDB header:transport protein
Chain: A: PDB Molecule:spcu;
PDBTitle: structure of the heterodimeric complex exou-spcu from the type iii2 secretion system (t3ss) of pseudomonas aeruginosa
11c3tu3A_



55.3 25
PDB header:toxin/toxin chaperone
Chain: A: PDB Molecule:exou chaperone;
PDBTitle: 1.92 angstrom resolution crystal structure of the full-length spcu in2 complex with full-length exou from the type iii secretion system of3 pseudomonas aeruginosa
12c1j9zB_



52.6 29
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-cytochrome p450 reductase;
PDBTitle: cypor-w677g
13c6efvA_



45.3 25
PDB header:flavoprotein
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: the nadph-dependent sulfite reductase flavoprotein adopts an extended2 conformation that is unique to this diflavin reductase
14d1ja1a2



44.2 29
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
15d2akja1



43.5 15
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
16c2j58G_



39.7 18
PDB header:membrane protein
Chain: G: PDB Molecule:outer membrane lipoprotein wza;
PDBTitle: the structure of wza
17d2b3aa1



37.2 32
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
18d1b1ca_



36.4 29
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
19c3hr4C_



35.1 16
PDB header:oxidoreductase/metal binding protein
Chain: C: PDB Molecule:nitric oxide synthase, inducible;
PDBTitle: human inos reductase and calmodulin complex
20c3qrzC_



34.7 26
PDB header:hormone receptor
Chain: C: PDB Molecule:abscisic acid receptor pyl5;
PDBTitle: crystal structure of native abscisic acid receptor pyl5 at 2.62 angstrom
21c5gxuA_



not modelled 32.9 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph--cytochrome p450 reductase 2;
PDBTitle: cystal structure of arabidopsis atr2
22c2zc0C_



not modelled 32.8 16
PDB header:transferase
Chain: C: PDB Molecule:alanine glyoxylate transaminase;
PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase
23c2w85A_



not modelled 29.9 20
PDB header:protein transport
Chain: A: PDB Molecule:peroxisomal membrane anchor protein pex14;
PDBTitle: structure of pex14 in complex with pex19
24d1ef5a_



not modelled 29.9 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
25c4oxxA_



not modelled 28.8 16
PDB header:electron transport
Chain: A: PDB Molecule:cindoxin;
PDBTitle: crystal structure of cindoxin, surface entropy reduction mutant
26c2lqjA_



not modelled 27.1 15
PDB header:hydrolase
Chain: A: PDB Molecule:mg2+ transport protein;
PDBTitle: solution structure of the c-terminal domain of the mgtc protein from2 mycobacterium tuberculosis
27c2w8iG_



not modelled 26.8 15
PDB header:membrane protein
Chain: G: PDB Molecule:putative outer membrane lipoprotein wza;
PDBTitle: crystal structure of wza24-345.
28c2bpoA_



not modelled 26.2 13
PDB header:reductase
Chain: A: PDB Molecule:nadph-cytochrom p450 reductase;
PDBTitle: crystal structure of the yeast cpr triple mutant: d74g, y75f, k78a.
29d1v5sa_



not modelled 25.9 27
Fold:TBP-like
Superfamily:KA1-like
Family:Kinase associated domain 1, KA1
30d2dloa2



not modelled 25.5 33
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
31c2m1mA_



not modelled 25.3 30
PDB header:transcription
Chain: A: PDB Molecule:auxin-induced protein iaa4;
PDBTitle: solution structure of the psiaa4 oligomerization domain reveals2 interaction modes for transcription factors in early auxin response
32d1lfda_



not modelled 25.2 23
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
33d1n8ja_



not modelled 24.5 20
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
34d1erna1



not modelled 24.5 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
35c4r2nA_



not modelled 22.7 19
PDB header:transferase
Chain: A: PDB Molecule:putative phenylalanine aminotransferase;
PDBTitle: crystal structure of rv3772 in complex with its substrate
36c3cbfA_



not modelled 22.2 14
PDB header:transferase
Chain: A: PDB Molecule:alpha-aminodipate aminotransferase;
PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27
37c2i7aA_



not modelled 22.2 33
PDB header:hydrolase
Chain: A: PDB Molecule:calpain 13;
PDBTitle: domain iv of human calpain 13
38c4h5bB_



not modelled 20.8 27
PDB header:unknown function
Chain: B: PDB Molecule:dr_1245 protein;
PDBTitle: crystal structure of dr_1245 from deinococcus radiodurans
39c5mtzA_



not modelled 20.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease z;
PDBTitle: crystal structure of a long form rnase z from yeast
40c3l34H_



not modelled 20.5 45
PDB header:transferase
Chain: H: PDB Molecule:sensor protein;
PDBTitle: the crystal structure of a two-component sensor domain (2nd2 form) from pseudomonas aeruginosa pa01
41c1tllA_



not modelled 19.9 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase, brain;
PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution.
42c2w8wA_



not modelled 19.5 14
PDB header:transferase
Chain: A: PDB Molecule:serine palmitoyltransferase;
PDBTitle: n100y spt with plp-ser
43d1g8fa1



not modelled 19.1 20
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:ATP sulfurylase N-terminal domain
44c2iufA_



not modelled 18.1 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase;
PDBTitle: the structures of penicillium vitale catalase: resting2 state, oxidised state (compound i) and complex with3 aminotriazole
45c2v2gC_



not modelled 17.7 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:peroxiredoxin 6;
PDBTitle: crystal structure of the c45s mutant of the peroxiredoxin 62 of arenicola marina. monoclinic form
46d1lbaa_



not modelled 17.5 6
Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
47c5ykjA_



not modelled 17.2 29
PDB header:transferase
Chain: A: PDB Molecule:peroxiredoxin prx1, mitochondrial;
PDBTitle: structural basis of the thiol resolving mechanism in yeast2 mitochondrial 1-cys peroxiredoxin via glutathione/thioredoxin systems
48c5jayB_



not modelled 17.0 12
PDB header:transferase
Chain: B: PDB Molecule:8-amino-7-oxononanoate synthase;
PDBTitle: crystal structure of an 8-amino-7-oxononanoate synthase from2 burkholderia xenovorans
49c3ly1C_



not modelled 16.9 15
PDB header:transferase
Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase;
PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution
50c3hwjA_



not modelled 16.7 29
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase mycbp2;
PDBTitle: crystal structure of the second phr domain of mouse myc-binding2 protein 2 (mycbp-2)
51c3no8A_



not modelled 16.3 21
PDB header:isomerase regulator
Chain: A: PDB Molecule:btb/poz domain-containing protein 2;
PDBTitle: crystal structure of the phr domain from human btbd2 protein
52c4g0zA_



not modelled 15.7 23
PDB header:gene regulation
Chain: A: PDB Molecule:protein argonaute 1;
PDBTitle: crystal structure of arabidopsis thaliana ago1 mid domain in complex2 with gmp
53c2va0E_



not modelled 15.2 43
PDB header:transferase
Chain: E: PDB Molecule:abfs arabinofuranosidase two component system sensor
PDBTitle: differential regulation of the xylan degrading apparatus of2 cellvibrio japonicus by a novel two component system
54c4pqlB_



not modelled 14.9 23
PDB header:dna binding protein
Chain: B: PDB Molecule:truncated replication protein repa;
PDBTitle: n-terminal domain of dna binding protein
55c4r7fA_



not modelled 14.6 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein (parmer_01801) from2 parabacteroides merdae atcc 43184 at 2.30 a resolution
56d1uula_



not modelled 14.5 24
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
57c3tqxA_



not modelled 14.3 15
PDB header:transferase
Chain: A: PDB Molecule:2-amino-3-ketobutyrate coenzyme a ligase;
PDBTitle: structure of the 2-amino-3-ketobutyrate coenzyme a ligase (kbl) from2 coxiella burnetii
58c3kh0A_



not modelled 14.3 28
PDB header:signaling protein
Chain: A: PDB Molecule:ral guanine nucleotide dissociation stimulator;
PDBTitle: crystal structure of the ras-association (ra) domain of ralgds
59c5ovqL_



not modelled 14.2 24
PDB header:oxidoreductase
Chain: L: PDB Molecule:peroxiredoxin;
PDBTitle: crystal structure of the peroxiredoxin (ahpc2) from the2 hyperthermophilic bacteria aquifex aeolicus vf
60c2m6rA_



not modelled 14.1 9
PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: apo_yqca
61d1n0ua5



not modelled 14.0 9
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
62c3zrrB_



not modelled 13.8 14
PDB header:transferase
Chain: B: PDB Molecule:serine-pyruvate aminotransferase (agxt);
PDBTitle: crystal structure and substrate specificity of a thermophilic2 archaeal serine : pyruvate aminotransferase from sulfolobus3 solfataricus
63c2e5aA_



not modelled 13.8 18
PDB header:ligase
Chain: A: PDB Molecule:lipoyltransferase 1;
PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp
64c3ej6D_



not modelled 13.7 8
PDB header:oxidoreductase
Chain: D: PDB Molecule:catalase-3;
PDBTitle: neurospora crassa catalase-3 crystal structure
65c1r6xA_



not modelled 13.7 20
PDB header:transferase
Chain: A: PDB Molecule:atp:sulfate adenylyltransferase;
PDBTitle: the crystal structure of a truncated form of yeast atp2 sulfurylase, lacking the c-terminal aps kinase-like domain,3 in complex with sulfate
66c6ambB_



not modelled 13.3 32
PDB header:signaling protein
Chain: B: PDB Molecule:afadin;
PDBTitle: crystal structure of the afadin ra1 domain in complex with hras
67c2mukX_



not modelled 13.2 33
PDB header:transcription
Chain: X: PDB Molecule:auxin-responsive protein iaa17;
PDBTitle: 1h, 13c, and 15n chemical shift assignments for aux/iaa17
68d2rgfa_



not modelled 13.2 28
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
69c3w6gP_



not modelled 13.1 20
PDB header:oxidoreductase
Chain: P: PDB Molecule:probable peroxiredoxin;
PDBTitle: structure of peroxiredoxin from anaerobic hyperthermophilic archaeon2 pyrococcus horikoshii
70c1g8gB_



not modelled 13.0 20
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: atp sulfurylase from s. cerevisiae: the binary product complex with2 aps
71c3ftbA_



not modelled 12.8 20
PDB header:transferase
Chain: A: PDB Molecule:histidinol-phosphate aminotransferase;
PDBTitle: the crystal structure of the histidinol-phosphate aminotransferase2 from clostridium acetobutylicum
72d2o3bb1



not modelled 12.6 23
Fold:Nuclease A inhibitor (NuiA)
Superfamily:Nuclease A inhibitor (NuiA)
Family:Nuclease A inhibitor (NuiA)
73d1oxja2



not modelled 12.5 22
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:PHAT domain
74d1lf6a2



not modelled 12.4 14
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:Bacterial glucoamylase N-terminal domain-like
75d1rp3b_



not modelled 12.3 26
Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Anti-sigma factor FlgM
Family:Anti-sigma factor FlgM
76c6i52A_



not modelled 12.2 38
PDB header:dna binding protein
Chain: A: PDB Molecule:replication factor a protein 3;
PDBTitle: yeast rpa bound to ssdna
77c4xlgA_



not modelled 12.1 22
PDB header:hydrolase
Chain: A: PDB Molecule:structure-specific endonuclease subunit slx1;
PDBTitle: c. glabrata slx1 in complex with slx4ccd.
78c1m8pB_



not modelled 12.1 11
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state
79d2q3la1



not modelled 12.1 11
Fold:SpoIIaa-like
Superfamily:SpoIIaa-like
Family:Sfri0576-like
80c4davA_



not modelled 12.0 11
PDB header:hydrolase/dna
Chain: A: PDB Molecule:sugar fermentation stimulation protein homolog;
PDBTitle: the structure of pyrococcus furiosus sfsa in complex with dna
81d1ae9a_



not modelled 11.1 18
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
82c2z5cA_



not modelled 11.0 29
PDB header:chaperone/hydrolase
Chain: A: PDB Molecule:protein ypl144w;
PDBTitle: crystal structure of a novel chaperone complex for yeast 20s2 proteasome assembly
83d1zsqa2



not modelled 10.5 36
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Myotubularin-like phosphatases
84c5b3kA_



not modelled 10.5 16
PDB header:electron transport
Chain: A: PDB Molecule:uncharacterized protein pa3435;
PDBTitle: c101a mutant of flavodoxin from pseudomonas aeruginosa
85d2grea2



not modelled 10.3 21
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
86d1x6va1



not modelled 9.8 13
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:ATP sulfurylase N-terminal domain
87c6h82b_



not modelled 9.8 30
PDB header:virus
Chain: B: PDB Molecule:vp4;
PDBTitle: cryo-em structure of the archaeal extremophilic internal membrane2 containing haloarcula hispanica icosahedral virus 2 (hhiv-2) at 3.783 angstroms resolution.
88c5bndA_



not modelled 9.7 44
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, atp-binding protein;
PDBTitle: crystal structure of the c-terminal domain of tagh
89c5ha0A_



not modelled 9.6 5
PDB header:transport protein
Chain: A: PDB Molecule:lipocalin ai-4;
PDBTitle: crystal structure of the ltbp1 leukotriene d4 complex
90d1qmva_



not modelled 9.4 25
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
91c1sy9B_



not modelled 9.4 36
PDB header:calcium-binding protein
Chain: B: PDB Molecule:cyclic-nucleotide-gated olfactory channel;
PDBTitle: structure of calmodulin complexed with a fragment of the2 olfactory cng channel
92c4mafH_



not modelled 9.0 15
PDB header:transferase
Chain: H: PDB Molecule:atp sulfurylase;
PDBTitle: soybean atp sulfurylase
93d1aiha_



not modelled 9.0 9
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
94d1s28a_



not modelled 8.9 22
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Type III secretory system chaperone
95c6drhC_



not modelled 8.7 17
PDB header:toxin
Chain: C: PDB Molecule:adp-ribosyl-(dinitrogen reductase) hydrolase;
PDBTitle: adp-ribosyltransferase toxin/immunity pair
96d1vhea2



not modelled 8.7 23
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
97c5c6kB_



not modelled 8.5 19
PDB header:hydrolase
Chain: B: PDB Molecule:integrase;
PDBTitle: bacteriophage p2 integrase catalytic domain
98c4gekG_



not modelled 8.5 18
PDB header:transferase
Chain: G: PDB Molecule:trna (cmo5u34)-methyltransferase;
PDBTitle: crystal structure of wild-type cmoa from e.coli
99c4nj7P_



not modelled 8.4 33
PDB header:protein binding
Chain: P: PDB Molecule:auxin response factor 7;
PDBTitle: pb1 domain of atarf7 - semet derivative

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