Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0493c_(-)_583704_584693
DateFri Jul 26 01:50:03 BST 2019
Unique Job IDa9d7ecbc83406aad
SequenceVGESTTQPAG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.541 Y:54.208 Z:51.001
Model (left) based on template d2icha1
Top template information
Fold:AttH-like
Superfamily:AttH-like
Family:AttH-like
Confidence and coverage
Confidence: 99.4% Coverage: 69%
227 residues ( 69% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2icha1



99.4 11
Fold:AttH-like
Superfamily:AttH-like
Family:AttH-like
2d1l1da_



83.5 13
Fold:Mss4-like
Superfamily:Mss4-like
Family:SelR domain
3c3cezA_



67.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase;
PDBTitle: crystal structure of methionine-r-sulfoxide reductase from2 burkholderia pseudomallei
4c2k8dA_



64.6 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msrb;
PDBTitle: solution structure of a zinc-binding methionine sulfoxide reductase
5c3e0mB_



56.8 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb
PDBTitle: crystal structure of fusion protein of msra and msrb
6c5fa9B_



54.5 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: bifunctional methionine sulfoxide reductase ab (msrab) from treponema2 denticola
7d1xm0a1



53.7 13
Fold:Mss4-like
Superfamily:Mss4-like
Family:SelR domain
8c2l1uA_



50.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b2, mitochondrial;
PDBTitle: structure-functional analysis of mammalian msrb2 protein
9c4g6tB_



48.0 16
PDB header:chaperone
Chain: B: PDB Molecule:type iii effector hopa1;
PDBTitle: structure of the hopa1-scha chaperone-effector complex
10c3hcjB_



43.5 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: structure of msrb from xanthomonas campestris (oxidized2 form)
11c2kaoA_



34.4 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b1;
PDBTitle: structure of reduced mouse methionine sulfoxide reductase b12 (sec95cys mutant)
12c3ttoD_



30.6 18
PDB header:transferase
Chain: D: PDB Molecule:dextransucrase;
PDBTitle: crystal structure of leuconostoc mesenteroides nrrl b-1299 n-2 terminally truncated dextransucrase dsr-e in triclinic form
13c5xf9F_



23.2 6
PDB header:oxidoreductase
Chain: F: PDB Molecule:nad-reducing hydrogenase;
PDBTitle: crystal structure of nad+-reducing [nife]-hydrogenase in the air-2 oxidized state
14c4pw1B_



22.1 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein with unknown function (clolep_02462)2 from clostridium leptum dsm 753 at 2.10 a resolution
15c3hiaB_



18.7 19
PDB header:choline-binding protein
Chain: B: PDB Molecule:choline binding protein;
PDBTitle: crystal structure of the choline binding domain of spr1274 in2 streptococcus pneumoniae
16c4nc2A_



18.2 19
PDB header:immune system
Chain: A: PDB Molecule:toxin b;
PDBTitle: crystal structure of tcdb-b1 bound to b39 vhh
17c1nvpC_



17.8 10
PDB header:transcription/dna
Chain: C: PDB Molecule:transcription initiation factor iia beta chain;
PDBTitle: human tfiia/tbp/dna complex
18d1nvpc_



17.8 10
Fold:Transcription factor IIA (TFIIA), beta-barrel domain
Superfamily:Transcription factor IIA (TFIIA), beta-barrel domain
Family:Transcription factor IIA (TFIIA), beta-barrel domain
19d1nh2c_



16.5 5
Fold:Transcription factor IIA (TFIIA), beta-barrel domain
Superfamily:Transcription factor IIA (TFIIA), beta-barrel domain
Family:Transcription factor IIA (TFIIA), beta-barrel domain
20c1nh2C_



16.5 5
PDB header:transcription/dna
Chain: C: PDB Molecule:transcription initiation factor iia large chain;
PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex
21c2ibjA_



not modelled 13.4 5
PDB header:electron transport
Chain: A: PDB Molecule:cytochrome b5;
PDBTitle: structure of house fly cytochrome b5
22d2dcya1



not modelled 13.2 17
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
23d1ytfc_



not modelled 13.1 5
Fold:Transcription factor IIA (TFIIA), beta-barrel domain
Superfamily:Transcription factor IIA (TFIIA), beta-barrel domain
Family:Transcription factor IIA (TFIIA), beta-barrel domain
24c4b8nC_



not modelled 12.6 0
PDB header:electron transport
Chain: C: PDB Molecule:cytochrome b5-host origin;
PDBTitle: cytochrome b5 of ostreococcus tauri virus 2
25d1hixa_



not modelled 12.4 22
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
26d1hkoa_



not modelled 12.2 6
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
27d1euea_



not modelled 12.1 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
28c1rm1C_



not modelled 11.5 5
PDB header:transcription/dna
Chain: C: PDB Molecule:transcription initiation factor iia large chain;
PDBTitle: structure of a yeast tfiia/tbp/tata-box dna complex
29c3lb9C_



not modelled 11.4 17
PDB header:hydrolase
Chain: C: PDB Molecule:endo-1,4-beta-xylanase;
PDBTitle: crystal structure of the b. circulans cpa123 circular permutant
30d1mj4a_



not modelled 11.1 11
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
31d1fu9a_



not modelled 11.0 20
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:C2HC finger
32d1cyoa_



not modelled 10.8 6
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
33d1xyna_



not modelled 10.5 9
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
34d1do9a_



not modelled 10.5 6
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
35d1m4wa_



not modelled 10.3 17
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
36c2r2cA_



not modelled 9.7 25
PDB header:membrane protein
Chain: A: PDB Molecule:28 kda outer membrane protein omp28;
PDBTitle: crystal structure of a domain of the outer membrane lipoprotein omp282 from porphyromonas gingivalis
37d1kbia2



not modelled 9.6 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
38d1soxa2



not modelled 9.2 11
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
39d1m2ia_



not modelled 9.1 6
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
40d1iccc_



not modelled 8.8 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
41c5hdwA_



not modelled 8.8 14
PDB header:protein binding
Chain: A: PDB Molecule:f-box only protein 3;
PDBTitle: apag domain of fbxo3
42c1x3xA_



not modelled 8.5 10
PDB header:electron transport
Chain: A: PDB Molecule:cytochrome b5;
PDBTitle: crystal structure of cytochrome b5 from ascaris suum
43c3lf5B_



not modelled 8.5 5
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome b5 reductase 4;
PDBTitle: structure of human nadh cytochrome b5 oxidoreductase (ncb5or) b52 domain to 1.25a resolution
44c5lnkc_



not modelled 8.5 7
PDB header:oxidoreductase
Chain: C: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
45d1yu8x1



not modelled 8.3 36
Fold:VHP, Villin headpiece domain
Superfamily:VHP, Villin headpiece domain
Family:VHP, Villin headpiece domain
46c3ixzB_



not modelled 8.3 15
PDB header:hydrolase
Chain: B: PDB Molecule:potassium-transporting atpase subunit beta;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
47c4ox3A_



not modelled 8.1 33
PDB header:hydrolase
Chain: A: PDB Molecule:putative carboxypeptidase yodj;
PDBTitle: structure of the ldcb ld-carboxypeptidase reveals the molecular basis2 of peptidoglycan recognition
48d1axxa_



not modelled 7.8 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
49c2wwcA_



not modelled 7.8 0
PDB header:hydrolase
Chain: A: PDB Molecule:1,4-beta-n-acetylmuramidase;
PDBTitle: 3d-structure of the modular autolysin lytc from2 streptococcus pneumoniae in complex with synthetic3 peptidoglycan ligand
50d1lj0a_



not modelled 7.8 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
51c2j8fA_



not modelled 7.8 14
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme;
PDBTitle: crystal structure of the modular cpl-1 endolysin complexed with a2 peptidoglycan analogue (e94q mutant in complex with a disaccharide-3 pentapeptide)
52d1ywka1



not modelled 7.7 7
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:KduI-like
53d1unca_



not modelled 7.5 45
Fold:VHP, Villin headpiece domain
Superfamily:VHP, Villin headpiece domain
Family:VHP, Villin headpiece domain
54c1ywkE_



not modelled 7.5 7
PDB header:isomerase
Chain: E: PDB Molecule:4-deoxy-l-threo-5-hexosulose-uronate ketol-
PDBTitle: crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate2 ketol-isomerase from enterococcus faecalis
55d1igoa_



not modelled 7.5 22
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
56c6bl5A_



not modelled 7.4 20
PDB header:viral protein
Chain: A: PDB Molecule:head decoration protein;
PDBTitle: head decoration protein from the hyperthermophilic phage p74-26
57d1aqaa_



not modelled 7.4 0
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
58c2dylA_



not modelled 7.3 21
PDB header:transferase
Chain: A: PDB Molecule:dual specificity mitogen-activated protein
PDBTitle: crystal structure of human mitogen-activated protein kinase2 kinase 7 activated mutant (s287d, t291d)
59c2yjlC_



not modelled 7.3 23
PDB header:lipid-binding protein
Chain: C: PDB Molecule:exoenzyme s synthesis protein b;
PDBTitle: structural characterization of a secretin pilot protein2 from the type iii secretion system (t3ss) of pseudomonas3 aeruginosa
60c3jtzA_



not modelled 7.0 9
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: structure of the arm-type binding domain of hpi integrase
61c3imoC_



not modelled 6.9 0
PDB header:unknown function
Chain: C: PDB Molecule:integron cassette protein;
PDBTitle: structure from the mobile metagenome of vibrio cholerae. integron2 cassette protein vch_cass14
62c2vyuA_



not modelled 6.9 7
PDB header:choline-binding protein
Chain: A: PDB Molecule:choline binding protein f;
PDBTitle: crystal structure of choline binding protein f from2 streptococcus pneumoniae in the presence of a3 peptidoglycan analogue (tetrasaccharide-pentapeptide)
63c5iydN_



not modelled 6.7 10
PDB header:transcription, transferase/dna/rna
Chain: N: PDB Molecule:transcription initiation factor iia subunit 1;
PDBTitle: human core-pic in the initial transcribing state (no iis)
64c3ecjC_



not modelled 6.6 21
PDB header:oxidoreductase
Chain: C: PDB Molecule:protein (homoprotocatechuate 2,3-dioxygenase);
PDBTitle: structure of e323l mutant of homoprotocatechuate 2,3-dioxygenase from2 brevibacterium fuscum at 1.65a resolution
65d1ihna_



not modelled 6.4 27
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
66c2keoA_



not modelled 6.1 0
PDB header:ligase
Chain: A: PDB Molecule:probable e3 ubiquitin-protein ligase herc2;
PDBTitle: solution nmr structure of human protein hs00059, cytochrome-b5-like2 domain of the herc2 e3 ligase. northeast structural genomics3 consortium (nesg) target ht98a
67c4ox5A_



not modelled 6.1 33
PDB header:hydrolase
Chain: A: PDB Molecule:ldcb ld-carboxypeptidase;
PDBTitle: structure of the ldcb ld-carboxypeptidase reveals the molecular basis2 of peptidoglycan recognition
68d2biba1



not modelled 6.0 7
Fold:beta-hairpin stack
Superfamily:Cell wall binding repeat
Family:Cell wall binding repeat
69d1unda_



not modelled 5.8 45
Fold:VHP, Villin headpiece domain
Superfamily:VHP, Villin headpiece domain
Family:VHP, Villin headpiece domain
70c6gcsY_



not modelled 5.8 27
PDB header:oxidoreductase
Chain: Y: PDB Molecule:nuym subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
71d1cxya_



not modelled 5.7 5
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
72c4f78A_



not modelled 5.5 22
PDB header:hydrolase
Chain: A: PDB Molecule:d,d-dipeptidase/d,d-carboxypeptidase;
PDBTitle: crystal structure of vancomycin resistance d,d-dipeptidase vanxyg
73c2a45J_



not modelled 5.5 6
PDB header:hydrolase/hydrolase inhibitor
Chain: J: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of the complex between thrombin and the central "e"2 region of fibrin
74d2q0zx2



not modelled 5.4 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Sec63 C-terminal domain-like
75d1dgja2



not modelled 5.4 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
76c2n67B_



not modelled 5.3 10
PDB header:toxin
Chain: B: PDB Molecule:hemolysin ii;
PDBTitle: c-terminal domain of hemolysin ii-p87m-bmrb
77c2k6nA_



not modelled 5.3 36
PDB header:structural protein
Chain: A: PDB Molecule:supervillin;
PDBTitle: solution structure of human supervillin headpiece, minimized2 average
78d1egza_



not modelled 5.2 13
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
79c2v04A_



not modelled 5.2 7
PDB header:lipid binding protein
Chain: A: PDB Molecule:choline binding protein f;
PDBTitle: crystal structure of choline binding protein f from streptococcus2 pneumoniae

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