Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0513_(-)_605607_606155
DateFri Jul 26 01:50:06 BST 2019
Unique Job ID9d86ecfe2fc614c4
SequenceMTPTGDTKPK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.049 Y:30.970 Z:46.577
Model (left) based on template c6hwhX_
Top template information
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
Confidence and coverage
Confidence: 28.9% Coverage: 28%
51 residues ( 28% of your sequence) have been modelled with 28.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6hwhX_



28.9 14
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
2c3enoC_



24.8 27
PDB header:hydrolase/unknown function
Chain: C: PDB Molecule:uncharacterized protein pf2011;
PDBTitle: crystal structure of pyrococcus furiosus pcc1 in complex2 with thermoplasma acidophilum kae1
3c3x2dN_



18.8 26
PDB header:viral protein/immune system
Chain: N: PDB Molecule:virion spike glycoprotein gp2;
PDBTitle: crystal structure of marburg virus gp in complex with the human2 survivor antibody mr78
4c2esyA_



18.5 55
PDB header:lipid binding protein
Chain: A: PDB Molecule:lung surfactant protein c;
PDBTitle: structure and influence on stability and activity of the n-2 terminal propetide part of lung surfactant protein c
5d1ohfa_



11.1 32
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tetraviridae-like VP
6d1pm4a_



8.7 50
Fold:Superantigen (mitogen) Ypm
Superfamily:Superantigen (mitogen) Ypm
Family:Superantigen (mitogen) Ypm
7d1lmia_



8.2 31
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Family:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
8c2oznB_



8.1 24
PDB header:toxin
Chain: B: PDB Molecule:hyalurononglucosaminidase;
PDBTitle: the cohesin-dockerin complex of nagj and nagh from clostridium2 perfringens
9c3le4A_



8.1 17
PDB header:nuclear protein
Chain: A: PDB Molecule:microprocessor complex subunit dgcr8;
PDBTitle: crystal structure of the dgcr8 dimerization domain
10c1a87A_



8.0 27
PDB header:bacteriocin
Chain: A: PDB Molecule:colicin n;
PDBTitle: colicin n
11d1a87a_



8.0 27
Fold:Toxins' membrane translocation domains
Superfamily:Colicin
Family:Colicin
12d1q1ra3



7.7 13
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
13c4uf7A_



7.3 29
PDB header:viral protein/immune system
Chain: A: PDB Molecule:glycoprotein;
PDBTitle: ghanaian henipavirus (gh-m74a) attachment glycoprotein in complex with2 human ephrinb2
14d2ibge1



6.8 23
Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:Hedgehog (development protein), N-terminal signaling domain
15d1ohfc_



5.6 32
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tetraviridae-like VP
16d1wxma1



5.3 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below