Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0517_(-)_608749_610059
DateFri Jul 26 01:50:06 BST 2019
Unique Job IDa8f9ff34058fb9ab
SequenceMAGGMDQPPG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:56.380 Y:48.419 Z:65.285
Model (left) based on template c6btmF_
Top template information
PDB header:membrane protein
Chain: F: PDB Molecule:alternative complex iii subunit f;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
Confidence and coverage
Confidence: 53.2% Coverage: 47%
203 residues ( 47% of your sequence) have been modelled with 53.2% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6btmF_



53.2 10
PDB header:membrane protein
Chain: F: PDB Molecule:alternative complex iii subunit f;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
2c2wwbB_



38.6 22
PDB header:ribosome
Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma;
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the actively2 translating wheat germ 80s ribosome
3d1y6ia2



26.0 24
Fold:GUN4-like
Superfamily:GUN4-like
Family:GUN4-like
4d1rhzb_



20.8 11
Fold:Single transmembrane helix
Superfamily:Preprotein translocase SecE subunit
Family:Preprotein translocase SecE subunit
5c4djiA_



17.5 8
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
6c6e4hA_



17.1 38
PDB header:oncoprotein
Chain: A: PDB Molecule:partner and localizer of brca2;
PDBTitle: solution nmr structure of the colied-coil palb2 homodimer
7d1stma_



12.5 25
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Satellite viruses
Family:Satellite viruses
8c6mjpF_



11.7 12
PDB header:lipid transport
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
9c1ym0B_



11.7 67
PDB header:hydrolase
Chain: B: PDB Molecule:fibrinotic enzyme component b;
PDBTitle: crystal structure of earthworm fibrinolytic enzyme component b: a2 novel, glycosylated two-chained trypsin
10c4gn0D_



11.7 8
PDB header:signaling protein
Chain: D: PDB Molecule:hamp domain of af1503;
PDBTitle: de novo phasing of a hamp-complex using an improved arcimboldo method
11d1z3xa2



11.0 24
Fold:GUN4-like
Superfamily:GUN4-like
Family:GUN4-like
12c3v28U_



10.6 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of hpf bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound hpf of the 2nd3 ribosome in the asu
13c3v26U_



10.4 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of hpf bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound hpf of the 1st3 ribosome in the asu
14c3ohcU_



10.4 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus ribosome complexed with2 erythromycin. this file contains the 30s subunit of one 70s ribosome.3 the entire crystal structure contains two 70s ribosomes.
15c3ohdU_



10.4 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus ribosome complexed with2 erythromycin. this file contains the 30s subunit of one 70s ribosome.3 the entire crystal structure contains two 70s ribosomes.
16c2qnhv_



10.4 31
PDB header:ribosome
Chain: V: PDB Molecule:
PDBTitle: interactions and dynamics of the shine-dalgarno helix in the 70s2 ribosome. this file, 2qnh, contains the 30s ribosome subunit, two3 trna, and mrna molecules. 50s ribosome subunit is in the file 1vsp.
17c2v48U_



10.2 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the ribosome recycling factor bound to the2 thermus thermophilus 70s ribosome with mrna, asl-phe and3 trna-fmet (part 3 of 4). this file contains the 30s4 subunit, mrna, p-site asl, e-site trna and rrf for5 molecule 2.
18c2v46U_



10.2 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the ribosome recycling factor bound to the2 thermus thermophilus 70s ribosome with mrna, asl-phe and3 trna-fmet (part 1 of 4). this file contains the 30s4 subunit, mrna, p-site asl, e-site trna and rrf for5 molecule 1.
19c3ohyU_



10.1 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 70s ribosome complexed with2 azithromycin. this file contains the 30s subunit of one 70s ribosome.3 the entire crystal structure contains two 70s ribosomes.
20c3oi0U_



10.1 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 70s ribosome complexed with2 azithromycin. this file contains the 30s subunit of one 70s ribosome.3 the entire crystal structure contains two 70s ribosomes.
21c4g5mX_



not modelled 10.1 31
PDB header:ribosome/antibiotic
Chain: X: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s ribosome with tetracycline. this entry2 contains the 30s subunit of molecule b.
22c4ji8U_



not modelled 10.1 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
23c3knhU_



not modelled 10.1 31
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the structures of viomycin bound to the 70s ribosome. this file2 contains the 30s subunit for molecule i
24c1vvzU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-u in the absence of paromomycin
25c1vxmU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of trna proline (cgg) bound to codon ccg-g on the2 ribosome
26c4kx1U_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-g on the ribosome
27c1vxkU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of trna proline (cgg) bound to codon ccg-g on the2 ribosome
28c1vvrU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-a on the ribosome
29c1vvpU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-a on the ribosome
30c3i9dX_



not modelled 9.9 31
PDB header:ribosome
Chain: X: PDB Molecule:30s ribosomal protein thx;
PDBTitle: initiation complex of 70s ribosome with two trnas and mrna. this entry2 3i9d contains 30s ribosomal subunit of molecule a. the 50s ribosomal3 subunit can be found in pdb entry 3i9e. molecule b in the same4 asymmetric unit is deposited as 3i9b (30s) and 3i9c (50s)
31c1vxpU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of trna proline (cgg) bound to codon ccc-g on the2 ribosome
32c1vvtU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccg-g on the ribosome
33c1vvnU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-u on the ribosome
34c1vvvU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccg-g on the ribosome
35c4kwzU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-g on the ribosome
36c1vvlU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-u on the ribosome
37c1vxsU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of trna proline (cgg) bound to codon ccc-g on the2 ribosome
38c1vvxU_



not modelled 9.9 31
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein s21;
PDBTitle: crystal structure of frameshift suppressor trna sufa6 bound to codon2 ccc-u in the absence of paromomycin
39c2ow8v_



not modelled 9.3 50
PDB header:ribosome
Chain: V: PDB Molecule:
PDBTitle: crystal structure of a 70s ribosome-trna complex reveals functional2 interactions and rearrangements. this file, 2ow8, contains the 30s3 ribosome subunit, two trna, and mrna molecules. 50s ribosome subunit4 is in the file 1vsa.
40c3v22U_



not modelled 9.1 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of rmf bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound rmf of the 1st3 ribosome in the asu
41c5sxpG_



not modelled 9.1 27
PDB header:signaling protein/ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
42c1n34V_



not modelled 9.0 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 in the presence of codon and crystallographically3 disordered near-cognate transfer rna anticodon stem-loop4 mismatched at the first codon position
43c5lmpV_



not modelled 9.0 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if1-if3-mrna translation pre-initiation2 complex (state-1c)
44c4dv1U_



not modelled 9.0 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 30s ribosomal subunit2 with a 16s rrna mutation, u20g, bound with streptomycin
45c4ji0U_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
46c4ji4U_



not modelled 9.0 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
47c4dv2U_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 30s ribosomal subunit2 with a 16s rrna mutation, c912a
48c4gkkV_



not modelled 9.0 56
PDB header:ribosome/antibiotic
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit complexed2 with a human mitochondrial anticodon stem loop (asl) of transfer rna3 methionine (trnamet) bound to an mrna with an aua-codon in the a-site4 and paromomycin
49c5lmuV_



not modelled 9.0 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if3-mrna-trna translation pre-initiation2 complex, closed form (state-4)
50c4juwU_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the ribosome bound to elongation factor g in the2 guanosine triphosphatase state (this file contains the 30s subunit)
51c4dv3U_



not modelled 9.0 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 30s ribosomal subunit2 with a 16s rrna mutation, c912a, bound with streptomycin
52c4nxmU_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of the 30s ribosomal subunit from a gidb (rsmg)2 mutant of thermus thermophilus (hb8)
53c4jv5U_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structures of pseudouridinilated stop codons with asls
54c1i97U_



not modelled 9.0 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 30s ribosomal subunit from thermus2 thermophilus in complex with tetracycline
55c1y6iA_



not modelled 8.8 24
PDB header:ligand binding protein
Chain: A: PDB Molecule:mg-chelatase cofactor gun4;
PDBTitle: synechocystis gun4
56c2b9oU_



not modelled 8.8 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: 30s ribosomal subunit, trnas and mrna from a crystal structure of the2 whole ribosomal complex with a stop codon in the a-site. this file3 contains the 30s subunit, trnas and mrna from a crystal structure of4 the whole ribosomal complex with a stop codon in the a-site and is5 described in remark 400.
57c2b9mU_



not modelled 8.8 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: 30s ribosomal subunit, trnas, mrna and release factor rf2 from a2 crystal structure of the whole ribosomal complex. this file contains3 the 30s ribosomal subunit, trnas, mrna and release factor rf2 from a4 crystal structure of the whole ribosomal complex". the entire crystal5 structure contains one 70s ribosome, trnas, mrna and release factor6 rf2 and is described in remark 400.
58c1n36V_



not modelled 8.8 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 in the presence of crystallographically disordered codon3 and near-cognate transfer rna anticodon stem-loop4 mismatched at the second codon position
59c4yhhV_



not modelled 8.8 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 30s ribosomal subunit from thermus2 thermophilus in complex with tigecycline
60c1xmoV_



not modelled 8.8 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of mnm5u34t6a37-trnalysuuu complexed with aag-mrna2 in the decoding center
61c2b64U_



not modelled 8.8 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: 30s ribosomal subunit, trnas, mrna and release factor rf1 from a2 crystal structure of the whole ribosomal complex. this file contains3 the 30s subunit, trnas, mrna and release factor rf1 from a crystal4 structure of the whole ribosomal complex". the entire crystal5 structure contains one 70s ribosome, trnas, mrna and release factor6 rf1 and is described in remark 400.
62c2hgiX_



not modelled 8.8 56
PDB header:ribosome
Chain: X: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s thermus thermophilus ribosome showing how2 the 16s 3'-end mimicks mrna e and p codons. this entry 2hgi contains3 30s ribosomal subunit. the 50s ribosomal subunit can be found in pdb4 entry 2hgj.
63c3huyU_



not modelled 8.8 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of ef-p bound to the 70s ribosome; this file contains the2 30s subunit, mrna, p-site trna and ef-p for molecule ii.
64c3v24U_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of rmf bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound rmf of the 2nd3 ribosome in the asu
65c1yl4X_



not modelled 8.7 56
PDB header:ribosome
Chain: X: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 70s ribosome with thrs operator and trnas. 30s2 subunit. the coordinates for the 50s subunit are in the pdb entry3 1yl3
66c1xnrV_



not modelled 8.7 56
PDB header:ribosome
Chain: V: PDB Molecule:16s ribosomal protein thx;
PDBTitle: crystal structure of an inosine-cytosine wobble base pair2 in the context of the decoding center
67c4gkjV_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit complexed2 with a human mitochondrial anticodon stem loop (asl) of transfer rna3 methionine (trnamet) bound to an mrna with an aug-codon in the a-site4 and paromomycin.
68c2wdgU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 70s ribosome in2 complex with mrna, paromomycin, acylated a-site trna,3 deacylated p-site trna, and e-site trna. this file4 contains the 30s subunit a-,p-, and e-site trnas and5 paromomycin for molecule i.
69c3v6uU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the bacterial ribosome ram mutation g347u. this2 entry contains the 30s ribosomal subunit of the first 70s molecule in3 the asymmetric unit
70c4ej9U_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the bacterial ribosome ram mutation g299a. this2 entry contains the 30s ribosomal subunit of the first 70s molecule in3 the asymmetric unit
71c4abrU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: complex of smpb, a tmrna fragment and ef-tu-gdp-kirromycin2 with the 70s ribosome
72c2hgrX_



not modelled 8.7 56
PDB header:ribosome
Chain: X: PDB Molecule:30s ribosomal protein thx;
PDBTitle: 70s t.th. ribosome functional complex with mrna and e- and p-site2 trnas at 4.5a. this entry 2hgr contains 30s ribosomal subunit. the3 50s ribosomal subunit can be found in pdb entry 2hgu.
73c4kfkU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s ribosome bound with the q253p mutant of2 release factor rf2. 30s of the b subunit
74c2y18U_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the crystal structure of ef-tu and trp-trna-trp bound to a2 cognate codon on the 70s ribosome.
75c1ibmV_



not modelled 8.7 56
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 in complex with a messenger rna fragment and cognate3 transfer rna anticodon stem-loop bound at the a site
76c2uxdV_



not modelled 8.7 56
PDB header:ribosome
Chain: V: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of an extended trna anticodon stem loop in complex2 with its cognate mrna cggg in the context of the thermus thermophilus3 30s subunit.
77c1xnqV_



not modelled 8.7 56
PDB header:ribosome
Chain: V: PDB Molecule:ribosomal protein thx;
PDBTitle: structure of an inosine-adenine wobble base pair complex in2 the context of the decoding center
78c4b8fU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 70s ribosome with both cognate trnas in the e2 and p sites representing an authentic elongation complex
79c4b8hU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 70s ribosome with both cognate trnas in the e2 and p sites representing an authentic elongation complex
80c2jl7U_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 3 of 4).3 this file contains the 30s subunit.
81c4kfhU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s ribosome bound with the q253p mutant of2 release factor rf2. 30s of the a subunit
82c4kvbU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: thermus thermophilus hb27 30s ribosomal subunit lacking ribosomal2 protein s17
83c2jl5U_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 1 of 4).3 this file contains the 30s subunit.
84c4rb9U_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with pactamycin (soaked), mrna and three deacylated trnas in the a, p3 and e sites
85c3v2cU_



not modelled 8.7 56
PDB header:ribosome/inhibitor
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of yfia bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound yfia of the 1st3 ribosome in the asu
86c4nvwU_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic dityromycin bound to 70s ribosome
87c4qjtu_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
88c3uxtU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the structure of thermorubin in complex with the 70s ribosome from2 thermus thermophilus. this file contains the 30s subunit of one 70s3 ribosome. the entire crystal structure contains two 70s ribosomes.'
89c4qcyU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-cytidine-puromycin in the a site and acylated trna in4 the p site. this entry contains the 30s subunit of the first 70s5 ribosome in the asu.
90c4rb7U_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with amicoumacin, mrna and three deacylated trnas in the a, p and e3 sites
91c4dhbU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of yaej bound to the 70s ribosome
92c4qcoU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing acylated trna-3 substrates in the a and p sites. this entry contains the 30s subunit4 of the second 70s ribosome in the asu.
93c4rbjU_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with negamycin, mrna and three deacylated trnas in the a, p and e3 sites
94c4qcwU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-puromycin in the a site and acylated trna in the p4 site. this entry contains the 30s subunit of the second 70s ribosome5 in the asu.
95c4rbbU_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with pactamycin (soaked), mrna and three deacylated trnas in the a, p3 and e sites
96c4qcmU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing acylated trna-3 substrates in the a and p sites. this entry contains the 30s subunit4 of the first 70s ribosome in the asu.
97c4rb5U_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with amicoumacin, mrna and three deacylated trnas in the a, p and e3 sites
98c4nvuU_



not modelled 8.7 56
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic dityromycin bound to 70s ribosome
99c4qcuU_



not modelled 8.7 56
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-puromycin in the a site and acylated trna in the p4 site. this entry contains the 30s subunit of the first 70s ribosome5 in the asu.

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Transmembrane helix prediction 

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