Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0521_(-)_612601_612906
DateFri Jul 26 01:50:07 BST 2019
Unique Job ID0272d234f1b2969e
SequenceMREAAQALGF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.843 Y:39.883 Z:34.917
Model (left) based on template d2o57a1
Top template information
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
Confidence and coverage
Confidence: 98.8% Coverage: 65%
66 residues ( 65% of your sequence) have been modelled with 98.8% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2o57a1



98.8 30
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
2c5gm2E_



97.3 21
PDB header:transferase
Chain: E: PDB Molecule:o-methylransferase;
PDBTitle: crystal structure of methyltransferase tled complexed with sah and2 teleocidin a1
3c5wp5A_



97.0 19
PDB header:transferase
Chain: A: PDB Molecule:phosphomethylethanolamine n-methyltransferase 2;
PDBTitle: arabidopsis thaliana phosphoethanolamine n-methyltransferase 22 (atpmt2) in complex with sah
4c4iv0B_



96.9 11
PDB header:transferase
Chain: B: PDB Molecule:phosphoethanolamine n-methyltransferase, putative;
PDBTitle: crystal structure of n-methyl transferase from plasmodium vivax2 complexed with s-adenosyl methionine and phosphate
5c2fk8A_



96.8 14
PDB header:transferase
Chain: A: PDB Molecule:methoxy mycolic acid synthase 4;
PDBTitle: crystal structure of hma (mmaa4) from mycobacterium tuberculosis2 complexed with s-adenosylmethionine
6d1tpya_



96.2 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
7d1kpga_



95.5 21
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
8c3busB_



95.4 18
PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of rebm
9d2fk8a1



95.3 14
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
10d1l1ea_



94.8 21
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
11c4krhB_



93.5 18
PDB header:transferase
Chain: B: PDB Molecule:phosphoethanolamine n-methyltransferase 2;
PDBTitle: semet haemonchus contortus phosphoethanolamine n-methyltransferase 22 in complex with s-adenosyl-l-methionine
12d1kpia_



93.1 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
13c4ineB_



93.0 14
PDB header:transferase
Chain: B: PDB Molecule:protein pmt-2;
PDBTitle: crystal structure of n-methyl transferase (pmt-2) from caenorhabditis2 elegant complexed with s-adenosyl homocysteine and3 phosphoethanolamine
14c5z9oA_



92.7 18
PDB header:transferase
Chain: A: PDB Molecule:cyclopropane-fatty-acyl-phospholipid synthase;
PDBTitle: the crystal structure of cyclopropane-fatty-acyl-phospholipid synthase2 from lactobacillus acidophilus
15c3ujcA_



92.3 14
PDB header:transferase
Chain: A: PDB Molecule:phosphoethanolamine n-methyltransferase;
PDBTitle: phosphoethanolamine methyltransferase mutant (h132a) from plasmodium2 falciparum in complex with phosphocholine
16c4pneA_



89.4 24
PDB header:biosynthetic protein
Chain: A: PDB Molecule:methyltransferase-like protein;
PDBTitle: crystal structure of the [4+2]-cyclase spnf
17c6bqcA_



78.5 14
PDB header:transferase
Chain: A: PDB Molecule:cyclopropane-fatty-acyl-phospholipid synthase;
PDBTitle: cyclopropane fatty acid synthase from e. coli
18d1nkva_



75.7 19
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Hypothetical Protein YjhP
19d1q08a_



43.4 21
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
20c2rq5A_



34.5 17
PDB header:transcription
Chain: A: PDB Molecule:protein jumonji;
PDBTitle: solution structure of the at-rich interaction domain (arid)2 of jumonji/jarid2
21c6nuwG_



not modelled 33.0 13
PDB header:cell cycle
Chain: G: PDB Molecule:inner kinetochore subunit nkp1;
PDBTitle: yeast ctf19 complex
22c1ye9E_



not modelled 32.1 17
PDB header:oxidoreductase
Chain: E: PDB Molecule:catalase hpii;
PDBTitle: crystal structure of proteolytically truncated catalase2 hpii from e. coli
23c2jrzA_



not modelled 29.3 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:histone demethylase jarid1c;
PDBTitle: solution structure of the bright/arid domain from the human2 jarid1c protein.
24c4p47A_



not modelled 28.3 15
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobactrum anthropi (oant_4429), target efi-510151, c-termius bound3 in ligand binding pocket
25c4qoqC_



not modelled 28.3 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:catalase;
PDBTitle: structure of bacillus pumilus catalase with guaiacol bound
26d1e93a_



not modelled 24.1 17
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
27d1ig8a1



not modelled 22.9 13
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
28d1yoza1



not modelled 20.7 31
Fold:AF0941-like
Superfamily:AF0941-like
Family:AF0941-like
29c1f4jC_



not modelled 20.0 10
PDB header:oxidoreductase
Chain: C: PDB Molecule:catalase;
PDBTitle: structure of tetragonal crystals of human erythrocyte catalase
30c4cabA_



not modelled 19.4 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase;
PDBTitle: the refined structure of catalase dr1998 from deinococcus radiodurans2 at 2.6 a resolution
31d1m7sa_



not modelled 19.0 17
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
32c3e4cB_



not modelled 17.5 29
PDB header:hydrolase
Chain: B: PDB Molecule:caspase-1;
PDBTitle: procaspase-1 zymogen domain crystal strucutre
33c3h11A_



not modelled 17.0 30
PDB header:apoptosis
Chain: A: PDB Molecule:casp8 and fadd-like apoptosis regulator;
PDBTitle: zymogen caspase-8:c-flipl protease domain complex
34d2io8a1



not modelled 16.3 35
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Glutathionylspermidine synthase substrate-binding domain-like
35d1dgfa_



not modelled 16.2 10
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
36c2xq1M_



not modelled 15.7 24
PDB header:oxidoreductase
Chain: M: PDB Molecule:peroxisomal catalase;
PDBTitle: crystal structure of peroxisomal catalase from the yeast hansenula2 polymorpha
37d2j78a1



not modelled 15.7 26
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Family 1 of glycosyl hydrolase
38d1uwsa_



not modelled 15.4 29
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Family 1 of glycosyl hydrolase
39c6g21B_



not modelled 15.3 15
PDB header:hydrolase
Chain: B: PDB Molecule:probable feruloyl esterase b-2;
PDBTitle: crystal structure of an esterase from aspergillus oryzae
40d1fp1d1



not modelled 15.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Plant O-methyltransferase, N-terminal domain
41c6c4rA_



not modelled 14.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:staphylopine dehydrogenase;
PDBTitle: staphylopine dehydrogenase (saodh) - apo
42c1ig8A_



not modelled 14.4 13
PDB header:transferase
Chain: A: PDB Molecule:hexokinase pii;
PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence
43c2wsiA_



not modelled 14.4 15
PDB header:transferase
Chain: A: PDB Molecule:fad synthetase;
PDBTitle: crystal structure of yeast fad synthetase (fad1) in complex2 with fad
44c4wwrB_



not modelled 14.4 21
PDB header:transport protein
Chain: B: PDB Molecule:ubiquitin-like protein 4a;
PDBTitle: crystal structure of bag6-ubl4a dimerization domain
45c1cp3B_



not modelled 14.2 38
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:apopain;
PDBTitle: crystal structure of the complex of apopain with the tetrapeptide2 inhibitor ace-dvad-fmc
46c2fp3A_



not modelled 14.1 14
PDB header:hydrolysis/apoptosis
Chain: A: PDB Molecule:caspase nc;
PDBTitle: crystal structure of the drosophila initiator caspase dronc
47d1gwea_



not modelled 14.0 17
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
48d1c20a_



not modelled 14.0 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:ARID-like
Family:ARID domain
49c2yqeA_



not modelled 13.6 28
PDB header:dna binding protein
Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d;
PDBTitle: solution structure of the arid domain of jarid1d protein
50c4iyrB_



not modelled 13.6 35
PDB header:hydrolase
Chain: B: PDB Molecule:caspase-6;
PDBTitle: crystal structure of full-length caspase-6 zymogen
51c1kmcB_



not modelled 13.4 24
PDB header:apoptosis/hydrolase
Chain: B: PDB Molecule:caspase-7;
PDBTitle: crystal structure of the caspase-7 / xiap-bir2 complex
52c6fatA_



not modelled 13.2 20
PDB header:hydrolase
Chain: A: PDB Molecule:carboxylic ester hydrolase;
PDBTitle: the crystal structure of a feruloyl esterase c from fusarium2 oxysporum.
53d1q9ua_



not modelled 13.1 29
Fold:TBP-like
Superfamily:TT1751-like
Family:TT1751-like
54c4wwrD_



not modelled 13.1 21
PDB header:transport protein
Chain: D: PDB Molecule:ubiquitin-like protein 4a;
PDBTitle: crystal structure of bag6-ubl4a dimerization domain
55c1ysmA_



not modelled 12.7 23
PDB header:metal binding protein
Chain: A: PDB Molecule:calcyclin-binding protein;
PDBTitle: nmr structure of n-terminal domain (residues 1-77) of siah-2 interacting protein.
56d1ysma1



not modelled 12.7 23
Fold:Long alpha-hairpin
Superfamily:Calcyclin-binding protein-like
Family:Siah interacting protein N terminal domain-like
57d1si8a_



not modelled 12.6 21
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
58c1nmqB_



not modelled 12.6 38
PDB header:apoptosis, hydrolase
Chain: B: PDB Molecule:caspase-3;
PDBTitle: extendend tethering: in situ assembly of inhibitors
59d2d5ua1



not modelled 12.5 16
Fold:PUG domain-like
Superfamily:PUG domain-like
Family:PUG domain
60c4pakA_



not modelled 12.5 22
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 verminephrobacter eiseniae ef01-2 (veis_3954, target efi-510324) a3 nephridial symbiont of the earthworm eisenia foetida, bound to (r)-4 pantoic acid
61d1j3ma_



not modelled 12.5 24
Fold:TBP-like
Superfamily:TT1751-like
Family:TT1751-like
62d4blca_



not modelled 12.2 13
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
63d1m72a_



not modelled 12.2 24
Fold:Caspase-like
Superfamily:Caspase-like
Family:Caspase catalytic domain
64d1ig6a_



not modelled 12.1 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:ARID-like
Family:ARID domain
65c5jftB_



not modelled 12.1 19
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:caspase 3, apoptosis-related cysteine protease a;
PDBTitle: zebra fish caspase-3
66c3wmtA_



not modelled 12.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:probable feruloyl esterase b-1;
PDBTitle: crystal structure of feruloyl esterase b from aspergillus oryzae
67c4e1rA_



not modelled 11.5 39
PDB header:dna binding protein
Chain: A: PDB Molecule:protein lsr2;
PDBTitle: crystal structure of the dimerization domain of lsr2 from2 mycobacterium tuberculosis in the p 31 2 1 space group
68c4e1pA_



not modelled 11.5 39
PDB header:dna binding protein
Chain: A: PDB Molecule:protein lsr2;
PDBTitle: crystal structure of the dimerization domain of lsr2 from2 mycobacterium tuberculosis in the p 1 21 1 space group
69c3zey8_



not modelled 11.4 46
PDB header:ribosome
Chain: 8: PDB Molecule:ribosomal protein s29, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
70c3uoaB_



not modelled 10.4 27
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation
PDBTitle: crystal structure of the malt1 paracaspase (p21 form)
71c2nn3D_



not modelled 10.4 24
PDB header:hydrolase
Chain: D: PDB Molecule:caspase-1;
PDBTitle: structure of pro-sf-caspase-1
72c4m9rB_



not modelled 10.4 15
PDB header:hydrolase
Chain: B: PDB Molecule:cell death protein 3;
PDBTitle: crystal structure of ced-3
73c5zigD_



not modelled 10.3 26
PDB header:isomerase
Chain: D: PDB Molecule:cellobiose 2-epimerase;
PDBTitle: the structure of cellobiose 2-epimerase from spirochaeta thermophila2 dsm 6192
74c4r27B_



not modelled 10.3 26
PDB header:hydrolase
Chain: B: PDB Molecule:glycoside hydrolase;
PDBTitle: crystal structure of beta-glycosidase bgl167
75d1czan1



not modelled 10.1 12
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
76c1kmiZ_



not modelled 10.1 24
PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
77c1cw5A_



not modelled 10.0 19
PDB header:toxin
Chain: A: PDB Molecule:type iia bacteriocin carnobacteriocin b2;
PDBTitle: solution structure of carnobacteriocin b2
78c3fxtB_



not modelled 9.8 5
PDB header:gene regulation
Chain: B: PDB Molecule:nucleoside diphosphate-linked moiety x motif 6;
PDBTitle: crystal structure of the n-terminal domain of human nudt6
79d1nw9b_



not modelled 9.8 30
Fold:Caspase-like
Superfamily:Caspase-like
Family:Caspase catalytic domain
80c3edqC_



not modelled 9.7 38
PDB header:hydrolase/hydrolase inhibitor
Chain: C: PDB Molecule:caspase-3;
PDBTitle: crystal structure of caspase-3 with inhibitor ac-ldesd-cho
81c2lm1A_



not modelled 9.6 19
PDB header:dna binding protein
Chain: A: PDB Molecule:lysine-specific demethylase lid;
PDBTitle: solution nmr structure of lysine-specific demethylase lid from2 drosophila melanogaster, northeast structural genomics consortium3 target fr824d
82c2fipA_



not modelled 9.6 24
PDB header:transcription
Chain: A: PDB Molecule:late genes activator;
PDBTitle: phage phi29 transcription regulator p4
83d1f1ja_



not modelled 9.5 24
Fold:Caspase-like
Superfamily:Caspase-like
Family:Caspase catalytic domain
84c5vakA_



not modelled 9.5 18
PDB header:signaling protein
Chain: A: PDB Molecule:beta-klotho;
PDBTitle: crystal structure of beta-klotho, domain 1
85c2v7yA_



not modelled 9.5 19
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein dnak;
PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state
86c3sipC_



not modelled 9.4 24
PDB header:hydrolase/ligase/hydrolase
Chain: C: PDB Molecule:caspase;
PDBTitle: crystal structure of drice and diap1-bir1 complex
87c2funB_



not modelled 9.3 19
PDB header:apoptosis/hydrolase
Chain: B: PDB Molecule:caspase-8;
PDBTitle: alternative p35-caspase-8 complex
88c6qgbA_



not modelled 9.3 28
PDB header:hydrolase
Chain: A: PDB Molecule:mono(2-hydroxyethyl) terephthalate hydrolase;
PDBTitle: crystal structure of ideonella sakaiensis mhetase bound to benzoic2 acid
89c2j2mD_



not modelled 9.0 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:catalase;
PDBTitle: crystal structure analysis of catalase from exiguobacterium2 oxidotolerans
90d1bg3a1



not modelled 8.9 12
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
91c2wdpA_



not modelled 8.9 33
PDB header:hydrolase
Chain: A: PDB Molecule:caspase-6;
PDBTitle: crystal structure of ligand free human caspase-6
92c1i51A_



not modelled 8.9 24
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:caspase-7 subunit p20;
PDBTitle: crystal structure of caspase-7 complexed with xiap
93c5u1dX_



not modelled 8.8 28
PDB header:transport protein
Chain: X: PDB Molecule:tap transporter inhibitor icp47;
PDBTitle: cryo-em structure of the human tap atp-binding cassette transporter
94d1x1ia1



not modelled 8.6 12
Fold:alpha/alpha toroid
Superfamily:Chondroitin AC/alginate lyase
Family:Hyaluronate lyase-like catalytic, N-terminal domain
95c2ql5A_



not modelled 8.5 24
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:caspase-7;
PDBTitle: crystal structure of caspase-7 with inhibitor ac-dmqd-cho
96c6axfG_



not modelled 8.3 12
PDB header:protein binding
Chain: G: PDB Molecule:ras guanyl-releasing protein 2;
PDBTitle: structure of rasgrp2 in complex with rap1b
97d1qwla_



not modelled 8.2 17
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
98c3p45I_



not modelled 8.1 33
PDB header:hydrolase
Chain: I: PDB Molecule:caspase-6;
PDBTitle: crystal structure of apo-caspase-6 at physiological ph
99c2jxjA_



not modelled 7.9 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:histone demethylase jarid1a;
PDBTitle: nmr structure of the arid domain from the histone h3k42 demethylase rbp2

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