Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0527_(ccdA)_617496_618275
DateFri Jul 26 01:50:07 BST 2019
Unique Job IDba7253fe3c16b47c
SequenceMTGFTEIAAV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.059 Y:49.217 Z:55.605
Model (left) based on template c5vkvA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
Confidence and coverage
Confidence:100.0% Coverage: 85%
220 residues ( 85% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5vkvA_



100.0 34
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
2c2n4xA_



100.0 18
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein (ccda);
PDBTitle: structure of the transmembrane electron transporter ccda
3c5njgB_



20.3 10
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 2;
PDBTitle: structure of an abc transporter: part of the structure that could be2 built de novo
4c4zjvD_



15.0 50
PDB header:transferase/inhibitor
Chain: D: PDB Molecule:erbb receptor feedback inhibitor 1;
PDBTitle: crystal structure of egfr kinase domain in complex with mitogen-2 inducible gene 6 protein
5d1v54l_



13.6 17
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
6c2y69Y_



10.8 17
PDB header:electron transport
Chain: Y: PDB Molecule:cytochrome c oxidase subunit 7c;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular oxygen
7c5do7B_



9.5 10
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 8;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
8c1xyr6_



9.2 67
PDB header:virus
Chain: 6: PDB Molecule:genome polyprotein, coat protein vp3;
PDB Fragment:residues 620-630 PDBTitle: poliovirus 135s cell entry intermediate
9c6mjpF_



7.5 10
PDB header:lipid transport
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
10c4p79A_



6.4 17
PDB header:cell adhesion
Chain: A: PDB Molecule:claudin-15;
PDBTitle: crystal structure of mouse claudin-15
11c2hg5D_



6.2 11
PDB header:membrane protein
Chain: D: PDB Molecule:kcsa channel;
PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter
12d1eaka5



5.1 67
Fold:Kringle-like
Superfamily:Kringle-like
Family:Fibronectin type II module

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below