Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0529_(ccsA)_619894_620868
DateFri Jul 26 01:50:08 BST 2019
Unique Job ID244ef2b9c6a37f82
SequenceLNTLHVNVGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.255 Y:39.410 Z:61.591
Model (left) based on template c5ir6B_
Top template information
PDB header:oxidoreductase
Chain: B: PDB Molecule:bd-type quinol oxidase subunit ii;
PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans
Confidence and coverage
Confidence: 46.0% Coverage: 57%
186 residues ( 57% of your sequence) have been modelled with 46.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5ir6B_



46.0 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:bd-type quinol oxidase subunit ii;
PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans
2c3aygA_



31.9 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric oxide reductase;
PDBTitle: crystal structure of nitric oxide reductase complex with hqno
3c5azcA_



29.5 22
PDB header:transferase
Chain: A: PDB Molecule:prolipoprotein diacylglyceryl transferase;
PDBTitle: crystal structure of escherichia coli lgt in complex with2 phosphatidylglycerol
4c6o7ua_



28.9 13
PDB header:membrane protein
Chain: A: PDB Molecule:
PDBTitle: saccharomyces cerevisiae v-atpase stv1-vo
5c3mk7K_



25.4 15
PDB header:oxidoreductase
Chain: K: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit n;
PDBTitle: the structure of cbb3 cytochrome oxidase
6c6gcsX_



19.8 23
PDB header:oxidoreductase
Chain: X: PDB Molecule:nuxm subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
7c3ol4B_



19.6 18
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c
8c2lkyA_



19.3 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
9c2m0nA_



16.7 25
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of a duf3349 annotated protein from mycobacterium2 abscessus, mab_3403c. seattle structural genomics center for3 infectious disease target myaba.17112.a.a2
10c6o7xa_



14.9 14
PDB header:membrane protein
Chain: A: PDB Molecule:vacuolar atp synthase catalytic subunit a;
PDBTitle: saccharomyces cerevisiae v-atpase stv1-v1vo state 3
11c3o0rB_



14.0 12
PDB header:immune system/oxidoreductase
Chain: B: PDB Molecule:nitric oxide reductase subunit b;
PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment
12c2kvcA_



12.8 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
13c5xnmj_



9.5 28
PDB header:membrane protein
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: structure of unstacked c2s2m2-type psii-lhcii supercomplex from pisum2 sativum
14c3jcuj_



9.3 28
PDB header:membrane protein
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
15d1u7ga_



7.1 18
Fold:Ammonium transporter
Superfamily:Ammonium transporter
Family:Ammonium transporter
16d2axtj1



6.6 67
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein J, PsbJ
Family:PsbJ-like
17c3a0hJ_



6.6 67
PDB header:electron transport
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: crystal structure of i-substituted photosystem ii complex

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below