Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0538_(-)_630043_631689
DateFri Jul 26 01:50:09 BST 2019
Unique Job ID8289ce0578b5cd85
SequenceMDVALGVAVT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.238 Y:50.342 Z:50.073
Model (left) based on template c3h1qB_
Top template information
PDB header:structural protein
Chain: B: PDB Molecule:ethanolamine utilization protein eutj;
PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans
Confidence and coverage
Confidence: 96.3% Coverage: 35%
194 residues ( 35% of your sequence) have been modelled with 96.3% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 75% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3h1qB_
96.3 16
PDB header:structural protein
Chain: B: PDB Molecule:ethanolamine utilization protein eutj;
PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans
2c4czeA_
93.4 21
PDB header:structural protein
Chain: A: PDB Molecule:rod shape-determining protein mreb;
PDBTitle: c. crescentus mreb, double filament, empty
3d1dkgd2
90.5 21
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
4c3htvA_
89.6 22
PDB header:transferase
Chain: A: PDB Molecule:d-allose kinase;
PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution
5d2e8aa2
89.5 23
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
6c1dkgD_
88.3 21
PDB header:complex (hsp24/hsp70)
Chain: D: PDB Molecule:molecular chaperone dnak;
PDBTitle: crystal structure of the nucleotide exchange factor grpe2 bound to the atpase domain of the molecular chaperone dnak
7c4kboA_
87.9 22
PDB header:signaling protein
Chain: A: PDB Molecule:stress-70 protein, mitochondrial;
PDBTitle: crystal structure of the human mortalin (grp75) atpase domain in the2 apo form
8d1bupa2
87.9 23
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
9c2e2pA_
87.2 14
PDB header:transferase
Chain: A: PDB Molecule:hexokinase;
PDBTitle: crystal structure of sulfolobus tokodaii hexokinase in2 complex with adp
10c5hv7A_
85.0 18
PDB header:transferase
Chain: A: PDB Molecule:probable sugar kinase;
PDBTitle: putative sugar kinases from synechococcus elongatus pcc7942 in complex2 with d-ribulose
11c2ap1A_
84.1 12
PDB header:transferase
Chain: A: PDB Molecule:putative regulator protein;
PDBTitle: crystal structure of the putative regulatory protein
12d1jcea2
83.9 23
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
13c1jcgA_
82.6 19
PDB header:structural protein
Chain: A: PDB Molecule:rod shape-determining protein mreb;
PDBTitle: mreb from thermotoga maritima, amppnp
14d2hoea3
81.7 17
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
15c1hpmA_
81.2 23
PDB header:hydrolase (acting on acid anhydrides)
Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat-
PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
16d2zgya2
76.4 15
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
17c6izrK_
76.1 22
PDB header:protein fibril
Chain: K: PDB Molecule:putative plasmid segregation protein parm;
PDBTitle: whole structure of a 15-stranded parm filament from clostridium2 botulinum
18c2khoA_
76.0 21
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein 70;
PDBTitle: nmr-rdc / xray structure of e. coli hsp70 (dnak) chaperone (1-605)2 complexed with adp and substrate
19d2ap1a2
75.0 7
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
20c3wqtB_
74.3 19
PDB header:structural genomics
Chain: B: PDB Molecule:cell division protein ftsa;
PDBTitle: staphylococcus aureus ftsa complexed with amppnp
21c4rtfD_
not modelled 72.5 22
PDB header:chaperone
Chain: D: PDB Molecule:chaperone protein dnak;
PDBTitle: crystal structure of molecular chaperone dnak from mycobacterium2 tuberculosis h37rv
22c6gfaA_
not modelled 71.9 16
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein 105 kda;
PDBTitle: structure of nucleotide binding domain of hsp110, atp and mg2+2 complexed
23c5jygA_
not modelled 71.8 26
PDB header:structural protein
Chain: A: PDB Molecule:actin-like atpase;
PDBTitle: cryo-em structure of the mamk filament at 6.5 a
24c3d2fC_
not modelled 71.0 21
PDB header:chaperone
Chain: C: PDB Molecule:heat shock protein homolog sse1;
PDBTitle: crystal structure of a complex of sse1p and hsp70
25c2v7zA_
not modelled 70.6 22
PDB header:chaperone
Chain: A: PDB Molecule:heat shock cognate 71 kda protein;
PDBTitle: crystal structure of the 70-kda heat shock cognate protein2 from rattus norvegicus in post-atp hydrolysis state
26c2v7yA_
not modelled 67.8 22
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein dnak;
PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state
27c2w40C_
not modelled 67.0 11
PDB header:transferase
Chain: C: PDB Molecule:glycerol kinase, putative;
PDBTitle: crystal structure of plasmodium falciparum glycerol kinase2 with bound glycerol
28c4htlA_
not modelled 65.6 10
PDB header:transferase
Chain: A: PDB Molecule:beta-glucoside kinase;
PDBTitle: lmo2764 protein, a putative n-acetylmannosamine kinase, from listeria2 monocytogenes
29c3c7nB_
not modelled 64.6 23
PDB header:chaperone/chaperone
Chain: B: PDB Molecule:heat shock cognate;
PDBTitle: structure of the hsp110:hsc70 nucleotide exchange complex
30d1z6ra2
not modelled 64.6 11
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
31c4ijaA_
not modelled 62.9 11
PDB header:protein binding
Chain: A: PDB Molecule:xylr protein;
PDBTitle: structure of s. aureus methicillin resistance factor mecr2
32c5vm1A_
not modelled 61.7 18
PDB header:transferase
Chain: A: PDB Molecule:xylulokinase;
PDBTitle: crystal structure of a xyloylose kinase from brucella ovis
33c5e84B_
not modelled 60.5 21
PDB header:chaperone
Chain: B: PDB Molecule:78 kda glucose-regulated protein;
PDBTitle: atp-bound state of bip
34c3gbtA_
not modelled 60.3 15
PDB header:transferase
Chain: A: PDB Molecule:gluconate kinase;
PDBTitle: crystal structure of gluconate kinase from lactobacillus acidophilus
35c4db3A_
not modelled 58.1 16
PDB header:transferase
Chain: A: PDB Molecule:n-acetyl-d-glucosamine kinase;
PDBTitle: 1.95 angstrom resolution crystal structure of n-acetyl-d-glucosamine2 kinase from vibrio vulnificus.
36c1e4gT_
not modelled 57.4 20
PDB header:bacterial cell division
Chain: T: PDB Molecule:cell division protein ftsa;
PDBTitle: ftsa (atp-bound form) from thermotoga maritima
37c3eo3B_
not modelled 57.1 22
PDB header:isomerase, transferase
Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n-
PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein
38c2d0oA_
not modelled 56.4 20
PDB header:chaperone
Chain: A: PDB Molecule:diol dehydratase-reactivating factor large
PDBTitle: strcuture of diol dehydratase-reactivating factor complexed2 with adp and mg2+
39c1mwmA_
not modelled 55.0 17
PDB header:structural protein
Chain: A: PDB Molecule:parm;
PDBTitle: parm from plasmid r1 adp form
40c3vpzA_
not modelled 52.4 18
PDB header:transferase
Chain: A: PDB Molecule:glucokinase;
PDBTitle: crystal structure of glucokinase from antarctic psychrotroph at 1.69a
41c5nckA_
not modelled 52.1 13
PDB header:transferase
Chain: A: PDB Molecule:n-acetylmannosamine kinase;
PDBTitle: the crystal structure of n-acetylmannosamine kinase in fusobacterium2 nucleatum
42c3vovC_
not modelled 51.2 16
PDB header:transferase
Chain: C: PDB Molecule:glucokinase;
PDBTitle: crystal structure of rok hexokinase from thermus thermophilus
43d2gupa1
not modelled 51.0 12
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
44c3iucC_
not modelled 49.0 17
PDB header:chaperone
Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated
PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp
45c2cgkB_
not modelled 48.7 9
PDB header:transferase
Chain: B: PDB Molecule:l-rhamnulose kinase;
PDBTitle: crystal structure of l-rhamnulose kinase from escherichia coli in an2 open uncomplexed conformation.
46c1xc3A_
not modelled 48.3 13
PDB header:transferase
Chain: A: PDB Molecule:putative fructokinase;
PDBTitle: structure of a putative fructokinase from bacillus subtilis
47c3mcpA_
not modelled 47.2 11
PDB header:transferase
Chain: A: PDB Molecule:glucokinase;
PDBTitle: crystal structure of glucokinase (bdi_1628) from parabacteroides2 distasonis atcc 8503 at 3.00 a resolution
48c5obuA_
not modelled 44.8 19
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein dnak;
PDBTitle: mycoplasma genitalium dnak deletion mutant lacking sbdalpha in complex2 with amppnp.
49d1z05a3
not modelled 44.2 16
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
50d3bzka5
not modelled 43.3 24
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Tex RuvX-like domain-like
51d1woqa1
not modelled 40.8 14
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
52d1pv8a_
not modelled 38.9 25
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
53d2aa4a1
not modelled 35.3 10
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ROK
54d1jcea1
not modelled 35.2 17
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
55c2hoeA_
not modelled 33.7 18
PDB header:transferase
Chain: A: PDB Molecule:n-acetylglucosamine kinase;
PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution
56d2fsja1
not modelled 32.3 19
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Ta0583-like
57c3imoC_
not modelled 31.1 14
PDB header:unknown function
Chain: C: PDB Molecule:integron cassette protein;
PDBTitle: structure from the mobile metagenome of vibrio cholerae. integron2 cassette protein vch_cass14
58d1dkgd1
not modelled 31.1 15
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
59d1bdga1
not modelled 30.9 15
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
60d1e4ft2
not modelled 29.3 25
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
61c1z05A_
not modelled 28.0 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, rok family;
PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein.
62d1r59o1
not modelled 27.4 11
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Glycerol kinase
63c3hz6A_
not modelled 26.2 17
PDB header:transferase
Chain: A: PDB Molecule:xylulokinase;
PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum
64c3r8eA_
not modelled 26.0 11
PDB header:transferase
Chain: A: PDB Molecule:hypothetical sugar kinase;
PDBTitle: crystal structure of a putative sugar kinase (chu_1875) from cytophaga2 hutchinsonii atcc 33406 at 1.65 a resolution
65c5f7pA_
not modelled 25.4 17
PDB header:transcription
Chain: A: PDB Molecule:lmo0178 protein;
PDBTitle: rok repressor lmo0178 from listeria monocytogenes
66d1zc6a1
not modelled 25.3 15
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
67d2i4ra1
not modelled 25.0 10
Fold:AtpF-like
Superfamily:AtpF-like
Family:AtpF-like
68d2p3ra1
not modelled 24.6 11
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Glycerol kinase
69d1bupa1
not modelled 24.3 19
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
70c1ig8A_
not modelled 23.6 16
PDB header:transferase
Chain: A: PDB Molecule:hexokinase pii;
PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence
71c3wxiB_
not modelled 21.9 9
PDB header:transferase
Chain: B: PDB Molecule:glycerol kinase;
PDBTitle: crystal structure of trypanosoma brucei gambiense glycerol kinase2 (ligand-free form)
72d2e8aa1
not modelled 20.3 17
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Actin/HSP70
73c4apwH_
not modelled 19.9 11
PDB header:structural protein
Chain: H: PDB Molecule:alp12;
PDBTitle: alp12 filament structure
74d1ig8a1
not modelled 18.6 16
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
75c2nlxA_
not modelled 18.3 21
PDB header:transferase
Chain: A: PDB Molecule:xylulose kinase;
PDBTitle: crystal structure of the apo e. coli xylulose kinase
76c2d4wA_
not modelled 18.1 19
PDB header:transferase
Chain: A: PDB Molecule:glycerol kinase;
PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060
77c2gupA_
not modelled 17.1 9
PDB header:transferase
Chain: A: PDB Molecule:rok family protein;
PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose
78c2i4rA_
not modelled 17.0 10
PDB header:hydrolase
Chain: A: PDB Molecule:v-type atp synthase subunit f;
PDBTitle: crystal structure of the v-type atp synthase subunit f from2 archaeoglobus fulgidus. nesg target gr52a.
79c1e1cA_
not modelled 16.1 14
PDB header:isomerase
Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain;
PDBTitle: methylmalonyl-coa mutase h244a mutant
80c4c23A_
not modelled 15.5 9
PDB header:transferase
Chain: A: PDB Molecule:l-fuculose kinase fuck;
PDBTitle: l-fuculose kinase
81c1xupO_
not modelled 15.3 22
PDB header:transferase
Chain: O: PDB Molecule:glycerol kinase;
PDBTitle: enterococcus casseliflavus glycerol kinase complexed with glycerol
82c1v8dC_
not modelled 15.0 32
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:hypothetical protein (tt1679);
PDBTitle: crystal structure of the conserved hypothetical protein2 tt1679 from thermus thermophilus
83c2fsnB_
not modelled 14.6 19
PDB header:structural protein
Chain: B: PDB Molecule:hypothetical protein ta0583;
PDBTitle: crystal structure of ta0583, an archaeal actin homolog, complex with2 adp
84c1nm3B_
not modelled 14.4 18
PDB header:electron transport
Chain: B: PDB Molecule:protein hi0572;
PDBTitle: crystal structure of heamophilus influenza hybrid-prx5
85c3hm8D_
not modelled 12.5 12
PDB header:transferase
Chain: D: PDB Molecule:hexokinase-3;
PDBTitle: crystal structure of the c-terminal hexokinase domain of human hk3
86c3ifrB_
not modelled 12.2 24
PDB header:transferase
Chain: B: PDB Molecule:carbohydrate kinase, fggy;
PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum
87d2hiya1
not modelled 11.7 31
Fold:SP0830-like
Superfamily:SP0830-like
Family:SP0830-like
88d1v8da_
not modelled 11.7 29
Fold:TTHA0583/YokD-like
Superfamily:TTHA0583/YokD-like
Family:Hypothetical protein TT1679
89c2w7nA_
not modelled 11.7 20
PDB header:transcription/dna
Chain: A: PDB Molecule:trfb transcriptional repressor protein;
PDBTitle: crystal structure of kora bound to operator dna: insight into2 repressor cooperation in rp4 gene regulation
90d1huxa_
not modelled 11.6 19
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
91c1v4sA_
not modelled 11.3 15
PDB header:transferase
Chain: A: PDB Molecule:glucokinase isoform 2;
PDBTitle: crystal structure of human glucokinase
92c5htxA_
not modelled 11.3 16
PDB header:transferase
Chain: A: PDB Molecule:putative xylulose kinase;
PDBTitle: putative sugar kinases from arabidopsis thaliana in complex with adp
93c3js6A_
not modelled 11.3 24
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized parm protein;
PDBTitle: crystal structure of apo psk41 parm protein
94c2eq5D_
not modelled 10.6 18
PDB header:isomerase
Chain: D: PDB Molecule:228aa long hypothetical hydantoin racemase;
PDBTitle: crystal structure of hydantoin racemase from pyrococcus horikoshii ot3
95c4ldnA_
not modelled 10.2 13
PDB header:transferase
Chain: A: PDB Molecule:purine nucleoside phosphorylase deod-type;
PDBTitle: crystal structure of a putative purine nucleoside phosphorylase from2 vibrio fischeri es114 (target nysgrc-029521)
96c3g85A_
not modelled 10.1 11
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator (laci family);
PDBTitle: crystal structure of laci family transcription regulator from2 clostridium acetobutylicum
97d1efpb_
not modelled 10.1 15
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
98c2yx5A_
not modelled 10.0 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0062 protein mj1593;
PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
99c4j8fA_
not modelled 10.0 14
PDB header:chaperone
Chain: A: PDB Molecule:heat shock 70 kda protein 1a/1b, hsc70-interacting protein;
PDBTitle: crystal structure of a fusion protein containing the nbd of hsp70 and2 the middle domain of hip

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Transmembrane helix prediction 

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