1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		V	S	A	W	F	N	Y	T	A	T	L	K	I	L	I	F	S	L	L	A	G	A	L	L	P	G	L	F	A	V	G	V	R	L	Q	A	A	G	D	G	A	D	A	T	A	R	R	R	P	L	L	V	A	V	S	W	A	I	F	A
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?																													?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Sequence		L	V	L	A	V	V	I	I	G	V	L	Y	I	A	R	D	F	I	A	H	H	T	G	W	A	F	L	G	A	T	P	K
Secondary structure
SS confidence
Disorder																													?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 26%) Alpha helix ( 83%) Beta strand ( 0%) TM helix ( 43%) (View membrane topology prediction)

Rank Aligned region

PDB 1ifp chain A Region: 61 - 77 Aligned: 17 Modelled: 17 Confidence: 55.5% Identity: 41% PDB header:virus Chain: A: PDB Molecule:major coat protein assembly; PDBTitle: inovirus (filamentous bacteriophage) strain pf3 major coat2 protein assembly Phyre2 PDB 6bzf chain G Region: 1 - 25 Aligned: 25 Modelled: 25 Confidence: 24.9% Identity: 20% PDB header:dna binding protein Chain: G: PDB Molecule:sporulation-specific protein 16; PDBTitle: structure of s. cerevisiae zip2:spo16 complex, c2 form Phyre2 PDB 2k1k chain B Region: 14 - 24 Aligned: 11 Modelled: 11 Confidence: 20.5% Identity: 64% PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 Phyre2 PDB 2k1l chain B Region: 14 - 24 Aligned: 11 Modelled: 11 Confidence: 20.5% Identity: 64% PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 Phyre2 PDB 2k1k chain A Region: 14 - 24 Aligned: 11 Modelled: 11 Confidence: 20.5% Identity: 64% PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 Phyre2 PDB 2k1l chain A Region: 14 - 24 Aligned: 11 Modelled: 11 Confidence: 20.5% Identity: 64% PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 Phyre2 PDB 3e11 chain A domain 1 Region: 78 - 85 Aligned: 8 Modelled: 8 Confidence: 15.7% Identity: 63% Fold: Zincin-like Superfamily: Metalloproteases ("zincins"), catalytic domain Family: TTHA0227-like Phyre2 PDB 4pv1 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 15.4% Identity: 25% PDB header:electron transport/inhibitor Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: cytochrome b6f structure from m. laminosus with the quinone analog2 inhibitor stigmatellin Phyre2 PDB 4i7z chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 15.4% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of cytochrome b6f in dopg, with disordered rieske2 iron-sulfur protein soluble domain Phyre2 PDB 4av3 chain A Region: 14 - 29 Aligned: 16 Modelled: 16 Confidence: 14.0% Identity: 31% PDB header:hydrolase Chain: A: PDB Molecule:k(+)-stimulated pyrophosphate-energized sodium pump; PDBTitle: crystal structure of thermotoga maritima sodium pumping membrane2 integral pyrophosphatase with metal ions in active site Phyre2 PDB 2e74 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus Phyre2 PDB 4h0l chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: cytochrome b6f complex crystal structure from mastigocladus laminosus2 with n-side inhibitor nqno Phyre2 PDB 2e76 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus Phyre2 PDB 1vf5 chain R Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus Phyre2 PDB 4h13 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from mastigocladus2 laminosus with tds Phyre2 PDB 2e75 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus Phyre2 PDB 1vf5 chain E Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus Phyre2 PDB 2e74 chain E domain 1 Region: 7 - 30 Aligned: 24 Modelled: 24 Confidence: 12.9% Identity: 25% Fold: Single transmembrane helix Superfamily: PetL subunit of the cytochrome b6f complex Family: PetL subunit of the cytochrome b6f complex Phyre2 PDB 4a01 chain B Region: 14 - 29 Aligned: 16 Modelled: 16 Confidence: 12.5% Identity: 38% PDB header:hydrolase Chain: B: PDB Molecule:proton pyrophosphatase; PDBTitle: crystal structure of the h-translocating pyrophosphatase Phyre2 PDB 2zp2 chain B Region: 83 - 92 Aligned: 10 Modelled: 10 Confidence: 12.4% Identity: 50% PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis Phyre2 1 c1ifpA_ 2 c6bzfG_ 3 c2k1kB_ 4 c2k1lB_ 5 c2k1kA_ 6 c2k1lA_ 7 d3e11a1 8 c4pv1E_ 9 c4i7zE_ 10 c4av3A_ 11 c2e74E_ 12 c4h0lE_ 13 c2e76E_ 14 c1vf5R_ 15 c4h13E_ 16 c2e75E_ 17 c1vf5E_ 18 d2e74e1 19 c4a01B_ 20 c2zp2B_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39