Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0559c_(-)_650410_650748
DateFri Jul 26 01:50:11 BST 2019
Unique Job ID1ee5c69d805f9c38
SequenceMKGTKLAVVV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:20.496 Y:34.124 Z:13.302
Model (left) based on template c3ismC_
Top template information
PDB header:hydrolase inhibitor/hydrolase
Chain: C: PDB Molecule:cg4930;
PDBTitle: crystal structure of the endog/endogi complex: mechanism of endog2 inhibition
Confidence and coverage
Confidence: 90.7% Coverage: 21%
24 residues ( 21% of your sequence) have been modelled with 90.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ismC_



90.7 42
PDB header:hydrolase inhibitor/hydrolase
Chain: C: PDB Molecule:cg4930;
PDBTitle: crystal structure of the endog/endogi complex: mechanism of endog2 inhibition
2c6nhwA_



28.6 47
PDB header:immune system
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
3c6nhwB_



28.5 47
PDB header:immune system
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
4c6nhwC_



27.5 47
PDB header:immune system
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
5c6nhwD_



26.7 47
PDB header:immune system
Chain: D: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
6c6nhwF_



26.6 47
PDB header:immune system
Chain: F: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
7c6nhwE_



26.6 47
PDB header:immune system
Chain: E: PDB Molecule:tumor necrosis factor receptor superfamily member 10b;
PDBTitle: structure of the transmembrane domain of the death receptor 5 - dimer2 of trimer
8d1mg7a1



23.3 33
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Early switch protein XOL-1, N-terminal domain
9c1mg7B_



20.5 33
PDB header:gene regulation
Chain: B: PDB Molecule:early switch protein xol-1 2.2k splice form;
PDBTitle: crystal structure of xol-1
10d2euca1



19.4 71
Fold:YfmB-like
Superfamily:YfmB-like
Family:YfmB-like
11c6c3rB_



18.1 47
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
12c3v46A_



16.6 40
PDB header:transcription
Chain: A: PDB Molecule:cell division control protein 73;
PDBTitle: crystal structure of yeast cdc73 c-terminal domain
13d1afra_



15.9 26
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
14d1qhka_



15.7 42
Fold:MbtH/L9 domain-like
Superfamily:L9 N-domain-like
Family:N-terminal domain of RNase HI
15d1joia_



11.8 12
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Plastocyanin/azurin-like
16d1nyed_



11.1 31
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
17c3ts9A_



11.1 31
PDB header:antiviral protein, hydrolase
Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1;
PDBTitle: crystal structure of the mda5 helicase insert domain
18c6f46A_



10.4 64
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-like protein 1;
PDBTitle: structure of the transmembrane helix of bclxl in phospholipid2 nanodiscs
19c5wodA_



9.4 36
PDB header:de novo protein
Chain: A: PDB Molecule:38-mer peptide;
PDBTitle: de novo design of covalently constrained meso-size protein scaffolds2 with unique tertiary structures
20d1rkra_



8.6 14
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Plastocyanin/azurin-like
21c2n0pA_



not modelled 7.5 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein aq_1974;
PDBTitle: solution structure of aquifex aeolicus aq1974
22c4wwrD_



not modelled 7.3 22
PDB header:transport protein
Chain: D: PDB Molecule:ubiquitin-like protein 4a;
PDBTitle: crystal structure of bag6-ubl4a dimerization domain
23d1jzga_



not modelled 7.2 12
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Plastocyanin/azurin-like
24d2bcqa3



not modelled 7.0 17
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:DNA polymerase beta-like
25c1v55B_



not modelled 6.9 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii;
PDBTitle: bovine heart cytochrome c oxidase at the fully reduced state
26d1za0a1



not modelled 6.9 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
27c3r79B_



not modelled 6.7 27
PDB header:structure genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharactertized protein from agrobacterium2 tumefaciens
28c5xtbW_



not modelled 6.6 75
PDB header:oxidoreductase/electron transport
Chain: W: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: cryo-em structure of human respiratory complex i matrix arm
29c2kelB_



not modelled 6.4 47
PDB header:transcription repressor
Chain: B: PDB Molecule:uncharacterized protein 56b;
PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1
30c4cyyA_



not modelled 6.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between metabolic disease,2 oxidative stress and inflammation
31d1k1ga_



not modelled 5.7 30
Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
32c4tkrB_



not modelled 5.7 38
PDB header:membrane protein
Chain: B: PDB Molecule:thiamine transporter thia;
PDBTitle: native-sad phasing for thit from listeria monocytogenes serovar.
33c2kw6A_



not modelled 5.5 55
PDB header:cell cycle
Chain: A: PDB Molecule:cyclin-dependent kinase 2-associated protein 1;
PDBTitle: solution nmr structure of cyclin-dependent kinase 2-associated protein2 1 (cdk2-associated protein 1; oral cancer suppressor deleted in oral3 cancer 1, doc-1) from h.sapiens, northeast structural genomics4 consortium target target hr3057h
34c6gcsA_



not modelled 5.3 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:75-kda protein (nuam);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
35c1i7wB_



not modelled 5.3 37
PDB header:cell adhesion
Chain: B: PDB Molecule:epithelial-cadherin;
PDBTitle: beta-catenin/phosphorylated e-cadherin complex
36c2ltaA_



not modelled 5.3 46
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed protein;
PDBTitle: solution nmr structure of de novo designed protein, rossmann 3x1 fold,2 northeast structural genomics consortium target or157
37d1llaa2



not modelled 5.2 47
Fold:Di-copper centre-containing domain
Superfamily:Di-copper centre-containing domain
Family:Hemocyanin middle domain
38c6fxfA_



not modelled 5.2 19
PDB header:signaling protein
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 3;
PDBTitle: crystal structure of the sam domain of murine sly1
39c3ahpA_



not modelled 5.1 28
PDB header:electron transport
Chain: A: PDB Molecule:cuta1;
PDBTitle: crystal structure of stable protein, cuta1, from a psychrotrophic2 bacterium shewanella sp. sib1
40c6c41A_



not modelled 5.1 70
PDB header:antimicrobial protein
Chain: A: PDB Molecule:clavanin-a;
PDBTitle: the clavanin peptide in the presence of tfe (2,2,2-trifluoroethanol),2 presented a amphipathic alpha-helices from phe-2 to val-22 residues
41c4walA_



not modelled 5.0 30
PDB header:protein binding/rna
Chain: A: PDB Molecule:branchpoint-bridging protein;
PDBTitle: crystal structure of selenomethionine msl5 protein in complex with rna2 at 2.2 a
42c1m57H_



not modelled 5.0 40
PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant))
43d1ukua_



not modelled 5.0 36
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)

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